RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 DCCP43146 1447 aa11.38□□□□□ -0.59
PHC1-209ENST00000540809 ZNF772Q68DY9 489 aaPredicted RBP11.38□□□□□ -0.59
PHC1-209ENST00000540809 LRRC59Q96AG4 307 aaKnown RBP11.38□□□□□ -0.59
PHC1-209ENST00000540809 ORAI2Q96SN7 254 aa11.38□□□□□ -0.59
PHC1-209ENST00000540809 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
PHC1-209ENST00000540809 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
PHC1-209ENST00000540809 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
PHC1-209ENST00000540809 EYA1Q99502 592 aa11.37□□□□□ -0.59
PHC1-209ENST00000540809 KIF1BO60333 1816 aa11.37□□□□□ -0.59
PHC1-209ENST00000540809 ADGRL3Q9HAR2 1447 aa11.36□□□□□ -0.59
PHC1-209ENST00000540809 RXRBP28702 533 aa11.36□□□□□ -0.59
PHC1-209ENST00000540809 AFF2P51816 1311 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
PHC1-209ENST00000540809 PNPLA6Q8IY17 1366 aa11.34□□□□□ -0.59
PHC1-209ENST00000540809 APLP1P51693 650 aa11.34□□□□□ -0.59
PHC1-209ENST00000540809 MTRQ99707 1265 aa11.34□□□□□ -0.59
PHC1-209ENST00000540809 ADGRF5Q8IZF2 1346 aa11.34□□□□□ -0.59
PHC1-209ENST00000540809 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
PHC1-209ENST00000540809 C8orf37Q96NL8 207 aa11.33□□□□□ -0.6
PHC1-209ENST00000540809 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
PHC1-209ENST00000540809 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
PHC1-209ENST00000540809 SWT1Q5T5J6 900 aaKnown RBP11.32□□□□□ -0.6
PHC1-209ENST00000540809 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
PHC1-209ENST00000540809 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
PHC1-209ENST00000540809 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
PHC1-209ENST00000540809 PTGDRQ13258 359 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 STK26Q9P289 416 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 PPLO60437 1756 aa11.31□□□□□ -0.6
PHC1-209ENST00000540809 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
PHC1-209ENST00000540809 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
PHC1-209ENST00000540809 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
PHC1-209ENST00000540809 ESCO1Q5FWF5 840 aa11.29□□□□□ -0.6
PHC1-209ENST00000540809 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
PHC1-209ENST00000540809 PRAG1Q86YV5 1406 aa11.28□□□□□ -0.6
PHC1-209ENST00000540809 FOXO3O43524 673 aa11.28□□□□□ -0.6
PHC1-209ENST00000540809 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
PHC1-209ENST00000540809 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
PHC1-209ENST00000540809 LAMC1P11047 1609 aa11.27□□□□□ -0.6
PHC1-209ENST00000540809 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
PHC1-209ENST00000540809 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
PHC1-209ENST00000540809 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
PHC1-209ENST00000540809 USP21Q9UK80 565 aa11.26□□□□□ -0.61
PHC1-209ENST00000540809 RGS12O14924 1447 aa11.26□□□□□ -0.61
PHC1-209ENST00000540809 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
PHC1-209ENST00000540809 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
PHC1-209ENST00000540809 RNF40O75150 1001 aa11.24□□□□□ -0.61
PHC1-209ENST00000540809 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
PHC1-209ENST00000540809 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
PHC1-209ENST00000540809 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
PHC1-209ENST00000540809 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
PHC1-209ENST00000540809 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
PHC1-209ENST00000540809 CFAP70Q5T0N1 1121 aa11.23□□□□□ -0.61
PHC1-209ENST00000540809 C14orf93Q9H972 538 aaKnown RBP11.23□□□□□ -0.61
PHC1-209ENST00000540809 ANKRD30BQ9BXX2 1392 aa11.23□□□□□ -0.61
PHC1-209ENST00000540809 PXDNQ92626 1479 aa11.23□□□□□ -0.61
PHC1-209ENST00000540809 TECPR2O15040 1411 aa11.22□□□□□ -0.61
PHC1-209ENST00000540809 SEMA3EO15041 775 aa11.22□□□□□ -0.61
PHC1-209ENST00000540809 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
PHC1-209ENST00000540809 IFT172Q9UG01 1749 aa11.22□□□□□ -0.61
PHC1-209ENST00000540809 TRPC5Q9UL62 973 aaPredicted RBP11.22□□□□□ -0.61
PHC1-209ENST00000540809 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.61
PHC1-209ENST00000540809 PIK3C2GO75747 1445 aa11.21□□□□□ -0.61
PHC1-209ENST00000540809 LCE2BO14633 110 aa11.21□□□□□ -0.61
PHC1-209ENST00000540809 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
PHC1-209ENST00000540809 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 MYOM2P54296 1465 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
PHC1-209ENST00000540809 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
PHC1-209ENST00000540809 ATRNO75882 1429 aa11.19□□□□□ -0.62
PHC1-209ENST00000540809 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
PHC1-209ENST00000540809 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
PHC1-209ENST00000540809 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
PHC1-209ENST00000540809 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
PHC1-209ENST00000540809 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
PHC1-209ENST00000540809 DNAJB2P25686 324 aa11.18□□□□□ -0.62
PHC1-209ENST00000540809 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
PHC1-209ENST00000540809 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
PHC1-209ENST00000540809 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
PHC1-209ENST00000540809 EP400Q96L91 3159 aa11.17□□□□□ -0.62
PHC1-209ENST00000540809 COPS2P61201 443 aa11.17□□□□□ -0.62
PHC1-209ENST00000540809 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
PHC1-209ENST00000540809 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
PHC1-209ENST00000540809 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
PHC1-209ENST00000540809 ZPR1O75312 459 aa11.16□□□□□ -0.62
PHC1-209ENST00000540809 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
PHC1-209ENST00000540809 NRXN1Q9ULB1 1477 aa11.16□□□□□ -0.62
PHC1-209ENST00000540809 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
PHC1-209ENST00000540809 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
PHC1-209ENST00000540809 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms