RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
CACNA2D4-211ENST00000540728 RAPGEF4Q8WZA2 1011 aa23.53■■□□□ 1.36
CACNA2D4-211ENST00000540728 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 TXNRD1Q16881 649 aa23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 ZCRB1Q8TBF4 217 aaKnown RBP23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 ANKRD26Q9UPS8 1709 aa23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 NSD2O96028 1365 aa23.52■■□□□ 1.36
CACNA2D4-211ENST00000540728 TNNT2P45379 298 aaPredicted RBP23.51■■□□□ 1.35
CACNA2D4-211ENST00000540728 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
CACNA2D4-211ENST00000540728 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
CACNA2D4-211ENST00000540728 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
CACNA2D4-211ENST00000540728 PROM2Q8N271 834 aa23.49■■□□□ 1.35
CACNA2D4-211ENST00000540728 STK32BQ9NY57 414 aa23.49■■□□□ 1.35
CACNA2D4-211ENST00000540728 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
CACNA2D4-211ENST00000540728 CASZ1Q86V15 1759 aa23.49■■□□□ 1.35
CACNA2D4-211ENST00000540728 SYTL4Q96C24 671 aaPredicted RBP23.48■■□□□ 1.35
CACNA2D4-211ENST00000540728 MORC1Q86VD1 984 aa23.47■■□□□ 1.35
CACNA2D4-211ENST00000540728 PAPPAQ13219 1627 aa23.45■■□□□ 1.34
CACNA2D4-211ENST00000540728 SPON1Q9HCB6 807 aa23.45■■□□□ 1.34
CACNA2D4-211ENST00000540728 PPP1R1BQ9UD71 204 aaPredicted RBP23.45■■□□□ 1.34
CACNA2D4-211ENST00000540728 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
CACNA2D4-211ENST00000540728 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
CACNA2D4-211ENST00000540728 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
CACNA2D4-211ENST00000540728 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
CACNA2D4-211ENST00000540728 EYA1Q99502 592 aa23.4■■□□□ 1.34
CACNA2D4-211ENST00000540728 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
CACNA2D4-211ENST00000540728 ZBTB7AO95365 584 aa23.39■■□□□ 1.33
CACNA2D4-211ENST00000540728 PKD1L3Q7Z443 1732 aa23.39■■□□□ 1.33
CACNA2D4-211ENST00000540728 EIF4A2Q14240 407 aaKnown RBP23.38■■□□□ 1.33
CACNA2D4-211ENST00000540728 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
CACNA2D4-211ENST00000540728 NCAPD2Q15021 1401 aa23.37■■□□□ 1.33
CACNA2D4-211ENST00000540728 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
CACNA2D4-211ENST00000540728 LY75O60449 1722 aa23.36■■□□□ 1.33
CACNA2D4-211ENST00000540728 ZNF827Q17R98 1081 aa23.34■■□□□ 1.33
CACNA2D4-211ENST00000540728 SLC27A3Q5K4L6 730 aa23.34■■□□□ 1.33
CACNA2D4-211ENST00000540728 LRRC4BQ9NT99 713 aa23.34■■□□□ 1.33
CACNA2D4-211ENST00000540728 PER1O15534 1290 aaPredicted RBP23.33■■□□□ 1.33
CACNA2D4-211ENST00000540728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.33■■□□□ 1.33
CACNA2D4-211ENST00000540728 ATF5Q9Y2D1 282 aaPredicted RBP23.33■■□□□ 1.33
CACNA2D4-211ENST00000540728 TOGARAM1Q9Y4F4 1720 aa23.33■■□□□ 1.32
CACNA2D4-211ENST00000540728 CYP27B1O15528 508 aa23.32■■□□□ 1.32
CACNA2D4-211ENST00000540728 KCNQ4P56696 695 aa23.31■■□□□ 1.32
CACNA2D4-211ENST00000540728 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
CACNA2D4-211ENST00000540728 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
CACNA2D4-211ENST00000540728 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
CACNA2D4-211ENST00000540728 QSER1Q2KHR3 1735 aa23.29■■□□□ 1.32
CACNA2D4-211ENST00000540728 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
CACNA2D4-211ENST00000540728 CCNL1Q9UK58 526 aaPredicted RBP23.29■■□□□ 1.32
CACNA2D4-211ENST00000540728 PLEKHG2Q9H7P9 1386 aa23.28■■□□□ 1.32
CACNA2D4-211ENST00000540728 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
CACNA2D4-211ENST00000540728 MPRIPQ6WCQ1 1025 aa23.27■■□□□ 1.32
CACNA2D4-211ENST00000540728 IFNL2Q8IZJ0 200 aa23.27■■□□□ 1.32
CACNA2D4-211ENST00000540728 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CACNA2D4-211ENST00000540728 C5P01031 1676 aa23.26■■□□□ 1.31
CACNA2D4-211ENST00000540728 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
CACNA2D4-211ENST00000540728 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
CACNA2D4-211ENST00000540728 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 PTGER2P43116 358 aa23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 MTHFSP49914 203 aa23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
CACNA2D4-211ENST00000540728 PHKG2P15735 406 aa23.23■■□□□ 1.31
CACNA2D4-211ENST00000540728 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
CACNA2D4-211ENST00000540728 DCAF8L1A6NGE4 600 aa23.22■■□□□ 1.31
CACNA2D4-211ENST00000540728 IL13P35225 146 aa23.22■■□□□ 1.31
CACNA2D4-211ENST00000540728 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
CACNA2D4-211ENST00000540728 SMARCC1Q92922 1105 aaPredicted RBP23.22■■□□□ 1.31
CACNA2D4-211ENST00000540728 PNPLA7Q6ZV29 1317 aa23.22■■□□□ 1.31
CACNA2D4-211ENST00000540728 SULT6B1Q6IMI4 303 aa23.21■■□□□ 1.31
CACNA2D4-211ENST00000540728 HSP90AB1P08238 724 aaKnown RBP23.2■■□□□ 1.3
CACNA2D4-211ENST00000540728 TMOD3Q9NYL9 352 aa23.2■■□□□ 1.3
CACNA2D4-211ENST00000540728 MSH5O43196 834 aa23.19■■□□□ 1.3
CACNA2D4-211ENST00000540728 AEBP1Q8IUX7 1158 aa23.19■■□□□ 1.3
CACNA2D4-211ENST00000540728 PIGBQ92521 554 aa23.19■■□□□ 1.3
CACNA2D4-211ENST00000540728 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
CACNA2D4-211ENST00000540728 ZNF530Q6P9A1 599 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-211ENST00000540728 FHDC1Q9C0D6 1143 aaPredicted RBP23.18■■□□□ 1.3
CACNA2D4-211ENST00000540728 DIAPH1O60610 1272 aaKnown RBP23.17■■□□□ 1.3
CACNA2D4-211ENST00000540728 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
CACNA2D4-211ENST00000540728 ARXQ96QS3 562 aa23.17■■□□□ 1.3
CACNA2D4-211ENST00000540728 SGIP1Q9BQI5 828 aa23.17■■□□□ 1.3
CACNA2D4-211ENST00000540728 KDRP35968 1356 aa23.16■■□□□ 1.3
CACNA2D4-211ENST00000540728 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
CACNA2D4-211ENST00000540728 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
CACNA2D4-211ENST00000540728 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
CACNA2D4-211ENST00000540728 POLD1P28340 1107 aa23.15■■□□□ 1.3
CACNA2D4-211ENST00000540728 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
CACNA2D4-211ENST00000540728 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
CACNA2D4-211ENST00000540728 COL24A1Q17RW2 1714 aa23.12■■□□□ 1.29
CACNA2D4-211ENST00000540728 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
CACNA2D4-211ENST00000540728 HMOX1P09601 288 aa23.11■■□□□ 1.29
CACNA2D4-211ENST00000540728 AK7Q96M32 723 aa23.11■■□□□ 1.29
CACNA2D4-211ENST00000540728 CFAP53Q96M91 514 aa23.1■■□□□ 1.29
CACNA2D4-211ENST00000540728 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
CACNA2D4-211ENST00000540728 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
CACNA2D4-211ENST00000540728 SIK1P57059 783 aa23.09■■□□□ 1.29
CACNA2D4-211ENST00000540728 CABP4P57796 275 aa23.09■■□□□ 1.29
CACNA2D4-211ENST00000540728 MSL1Q68DK7 614 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms