RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 SWI5Q1ZZU3 235 aa8.62□□□□□ -1.03
SMG1P4-205ENST00000540706 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
SMG1P4-205ENST00000540706 CCDC87Q9NVE4 849 aa8.62□□□□□ -1.03
SMG1P4-205ENST00000540706 IGHA2P01877 340 aa8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 CCSER2Q9H7U1 834 aa8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
SMG1P4-205ENST00000540706 NUDT7P0C024 238 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 MCF2L2Q86YR7 1114 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 TATDN2Q93075 761 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 RNF135Q8IUD6 432 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 RAVER1Q8IY67 606 aaKnown RBP8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
SMG1P4-205ENST00000540706 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 GPR182O15218 404 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 FAM26DQ5JW98 314 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 ZNF746Q6NUN9 644 aaPredicted RBP8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 CTSHP09668 335 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 MPSTP25325 297 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 IGBP1P78318 339 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 PMM1Q92871 262 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 SAP130Q9H0E3 1048 aa8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 DNAAF2Q9NVR5 837 aaKnown RBP8.59□□□□□ -1.03
SMG1P4-205ENST00000540706 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 SLC34A2O95436 690 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 IFT57Q9NWB7 429 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 EGFL7Q9UHF1 273 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 G3V3G9 751 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 TREHO43280 583 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 CCDC85AQ96PX6 553 aaPredicted RBP8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 TGIF2Q9GZN2 237 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 PRR12Q9ULL5 1215 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 KIF21AQ7Z4S6 1674 aa8.58□□□□□ -1.04
SMG1P4-205ENST00000540706 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 RNF34Q969K3 372 aa8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 COL4A3BPQ9Y5P4 624 aa8.57□□□□□ -1.04
SMG1P4-205ENST00000540706 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG1P4-205ENST00000540706 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
SMG1P4-205ENST00000540706 RBL2Q08999 1139 aa8.56□□□□□ -1.04
SMG1P4-205ENST00000540706 MYH16Q9H6N6 1097 aa8.56□□□□□ -1.04
SMG1P4-205ENST00000540706 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
SMG1P4-205ENST00000540706 POTEFA5A3E0 1075 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 ZNF76P36508 570 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 CCDC102BQ68D86 513 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 FILIP1Q7Z7B0 1213 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 FKBPLQ9UIM3 349 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 RNF19BQ6ZMZ0 732 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 PCDH12Q9NPG4 1184 aa8.55□□□□□ -1.04
SMG1P4-205ENST00000540706 XPCQ01831 940 aaPredicted RBP8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 SWT1Q5T5J6 900 aaKnown RBP8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 GMLQ99445 158 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 CFTRP13569 1480 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 CEP164Q9UPV0 1460 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 CCDC194A0A1B0GVG4 234 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 SORBS3O60504 671 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 EHHADHQ08426 723 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 DSC3Q14574 896 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 PLEKHG6Q3KR16 790 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 APBB1IPQ7Z5R6 666 aaPredicted RBP8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 ATCAYQ86WG3 371 aa8.54□□□□□ -1.04
SMG1P4-205ENST00000540706 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
SMG1P4-205ENST00000540706 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
SMG1P4-205ENST00000540706 IRF2BPLQ9H1B7 796 aa8.53□□□□□ -1.04
SMG1P4-205ENST00000540706 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
SMG1P4-205ENST00000540706 INPP5FQ9Y2H2 1132 aa8.53□□□□□ -1.04
SMG1P4-205ENST00000540706 FGRP09769 529 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 GTF2IP78347 998 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 TMC4Q7Z404 712 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 SIX5Q8N196 739 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 TMC1Q8TDI8 760 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 FAM126AQ9BYI3 521 aaPredicted RBP8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 NOP58Q9Y2X3 529 aaKnown RBP8.52□□□□□ -1.04
SMG1P4-205ENST00000540706 EVA1CP58658 441 aa8.52□□□□□ -1.05
SMG1P4-205ENST00000540706 DAB2P98082 770 aa8.52□□□□□ -1.05
SMG1P4-205ENST00000540706 RSF1Q96T23 1441 aaPredicted RBP8.52□□□□□ -1.05
SMG1P4-205ENST00000540706 ZBTB39O15060 712 aa8.51□□□□□ -1.05
SMG1P4-205ENST00000540706 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
SMG1P4-205ENST00000540706 AMPD3Q01432 767 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms