RNA–Protein interactions for RNA: ENST00000540558.1

RHBDL2-203, Transcript of rhomboid like 2, humanhuman

TSL 1 (best) BASIC

Gene RHBDL2, Length 697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL2-203ENST00000540558 SHANK3Q9BYB0 1731 aa21.41■■□□□ 1.02
RHBDL2-203ENST00000540558 RALBP1Q15311 655 aa21.41■■□□□ 1.02
RHBDL2-203ENST00000540558 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
RHBDL2-203ENST00000540558 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
RHBDL2-203ENST00000540558 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
RHBDL2-203ENST00000540558 NCAPD2Q15021 1401 aa21.39■■□□□ 1.02
RHBDL2-203ENST00000540558 HMOX1P09601 288 aa21.38■■□□□ 1.01
RHBDL2-203ENST00000540558 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
RHBDL2-203ENST00000540558 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
RHBDL2-203ENST00000540558 ACSBG1Q96GR2 724 aa21.37■■□□□ 1.01
RHBDL2-203ENST00000540558 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
RHBDL2-203ENST00000540558 COL3A1P02461 1466 aaPredicted RBP21.37■■□□□ 1.01
RHBDL2-203ENST00000540558 TNS1Q9HBL0 1735 aaKnown RBP21.36■■□□□ 1.01
RHBDL2-203ENST00000540558 PCDH11XQ9BZA7 1347 aa21.35■■□□□ 1.01
RHBDL2-203ENST00000540558 PCDH11YQ9BZA8 1340 aa21.35■■□□□ 1.01
RHBDL2-203ENST00000540558 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
RHBDL2-203ENST00000540558 APBA3O96018 575 aa21.34■■□□□ 1.01
RHBDL2-203ENST00000540558 BAG6P46379 1132 aa21.34■■□□□ 1.01
RHBDL2-203ENST00000540558 DEFB132Q7Z7B7 95 aa21.34■■□□□ 1.01
RHBDL2-203ENST00000540558 MYBBP1AQ9BQG0 1328 aaKnown RBP21.33■■□□□ 1.01
RHBDL2-203ENST00000540558 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
RHBDL2-203ENST00000540558 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
RHBDL2-203ENST00000540558 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
RHBDL2-203ENST00000540558 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
RHBDL2-203ENST00000540558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 1
RHBDL2-203ENST00000540558 NHSQ6T4R5 1651 aa21.31■■□□□ 1
RHBDL2-203ENST00000540558 BCL9O00512 1426 aa21.3■■□□□ 1
RHBDL2-203ENST00000540558 CYP27B1O15528 508 aa21.3■■□□□ 1
RHBDL2-203ENST00000540558 KCNQ2O43526 872 aa21.3■■□□□ 1
RHBDL2-203ENST00000540558 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
RHBDL2-203ENST00000540558 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
RHBDL2-203ENST00000540558 EN1Q05925 392 aaPredicted RBP21.3■■□□□ 1
RHBDL2-203ENST00000540558 PTF1AQ7RTS3 328 aa21.3■■□□□ 1
RHBDL2-203ENST00000540558 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
RHBDL2-203ENST00000540558 KDRP35968 1356 aa21.3■■□□□ 1
RHBDL2-203ENST00000540558 AMOTQ4VCS5 1084 aa21.29■■□□□ 1
RHBDL2-203ENST00000540558 BTAF1O14981 1849 aa21.28■■□□□ 1
RHBDL2-203ENST00000540558 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
RHBDL2-203ENST00000540558 IFNL2Q8IZJ0 200 aa21.28■■□□□ 1
RHBDL2-203ENST00000540558 EP400Q96L91 3159 aa21.28■■□□□ 1
RHBDL2-203ENST00000540558 ITGB4P16144 1822 aa21.27■□□□□ 0.99
RHBDL2-203ENST00000540558 ANP32CO43423 234 aa21.26■□□□□ 0.99
RHBDL2-203ENST00000540558 PHKG2P15735 406 aa21.26■□□□□ 0.99
RHBDL2-203ENST00000540558 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
RHBDL2-203ENST00000540558 C1orf141Q5JVX7 400 aa21.26■□□□□ 0.99
RHBDL2-203ENST00000540558 VIRMAQ69YN4 1812 aaKnown RBP21.25■□□□□ 0.99
RHBDL2-203ENST00000540558 EZH2Q15910 746 aaKnown RBP21.25■□□□□ 0.99
RHBDL2-203ENST00000540558 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
RHBDL2-203ENST00000540558 TOGARAM1Q9Y4F4 1720 aa21.24■□□□□ 0.99
RHBDL2-203ENST00000540558 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
RHBDL2-203ENST00000540558 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
RHBDL2-203ENST00000540558 HSP90AB1P08238 724 aaKnown RBP21.21■□□□□ 0.99
RHBDL2-203ENST00000540558 NKX1-1Q15270 411 aaPredicted RBP21.21■□□□□ 0.99
RHBDL2-203ENST00000540558 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
RHBDL2-203ENST00000540558 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
RHBDL2-203ENST00000540558 CAMKK2Q96RR4 588 aa21.21■□□□□ 0.99
RHBDL2-203ENST00000540558 FCHSD2O94868 740 aa21.2■□□□□ 0.98
RHBDL2-203ENST00000540558 PLSCR1O15162 318 aa21.19■□□□□ 0.98
RHBDL2-203ENST00000540558 NEFMP07197 916 aa21.19■□□□□ 0.98
RHBDL2-203ENST00000540558 RGPD3A6NKT7 1758 aaPredicted RBP21.18■□□□□ 0.98
RHBDL2-203ENST00000540558 RGPD4Q7Z3J3 1758 aa21.18■□□□□ 0.98
RHBDL2-203ENST00000540558 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
RHBDL2-203ENST00000540558 AKAP4Q5JQC9 854 aa21.18■□□□□ 0.98
RHBDL2-203ENST00000540558 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
RHBDL2-203ENST00000540558 WDR43Q15061 677 aaKnown RBP eCLIP21.17■□□□□ 0.98
RHBDL2-203ENST00000540558 GAS2L2Q8NHY3 880 aa21.17■□□□□ 0.98
RHBDL2-203ENST00000540558 PHACTR3Q96KR7 559 aa21.17■□□□□ 0.98
RHBDL2-203ENST00000540558 TMOD3Q9NYL9 352 aa21.17■□□□□ 0.98
RHBDL2-203ENST00000540558 RREB1Q92766 1687 aa21.17■□□□□ 0.98
RHBDL2-203ENST00000540558 PNNQ9H307 717 aaKnown RBP21.15■□□□□ 0.98
RHBDL2-203ENST00000540558 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
RHBDL2-203ENST00000540558 KDM6AO15550 1401 aaPredicted RBP21.14■□□□□ 0.98
RHBDL2-203ENST00000540558 CABP4P57796 275 aa21.14■□□□□ 0.97
RHBDL2-203ENST00000540558 TXNRD1Q16881 649 aa21.14■□□□□ 0.97
RHBDL2-203ENST00000540558 PIGBQ92521 554 aa21.14■□□□□ 0.97
RHBDL2-203ENST00000540558 ERVV-2B6SEH9 535 aa21.13■□□□□ 0.97
RHBDL2-203ENST00000540558 DLG5Q8TDM6 1919 aa21.13■□□□□ 0.97
RHBDL2-203ENST00000540558 MAPK8IP3Q9UPT6 1336 aa21.12■□□□□ 0.97
RHBDL2-203ENST00000540558 LGR6Q9HBX8 967 aa21.12■□□□□ 0.97
RHBDL2-203ENST00000540558 LY75O60449 1722 aa21.12■□□□□ 0.97
RHBDL2-203ENST00000540558 GNAT3A8MTJ3 354 aa21.11■□□□□ 0.97
RHBDL2-203ENST00000540558 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
RHBDL2-203ENST00000540558 PROM2Q8N271 834 aa21.11■□□□□ 0.97
RHBDL2-203ENST00000540558 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
RHBDL2-203ENST00000540558 CCDC184Q52MB2 194 aa21.1■□□□□ 0.97
RHBDL2-203ENST00000540558 NBPF14Q5TI25 921 aa21.1■□□□□ 0.97
RHBDL2-203ENST00000540558 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
RHBDL2-203ENST00000540558 NFATC2IPQ8NCF5 419 aa21.09■□□□□ 0.97
RHBDL2-203ENST00000540558 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
RHBDL2-203ENST00000540558 PLEKHF1Q96S99 279 aa21.09■□□□□ 0.97
RHBDL2-203ENST00000540558 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
RHBDL2-203ENST00000540558 KCNQ4P56696 695 aa21.08■□□□□ 0.97
RHBDL2-203ENST00000540558 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
RHBDL2-203ENST00000540558 ADAMTS8Q9UP79 889 aa21.08■□□□□ 0.97
RHBDL2-203ENST00000540558 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
RHBDL2-203ENST00000540558 CCNL1Q9UK58 526 aaPredicted RBP21.07■□□□□ 0.96
RHBDL2-203ENST00000540558 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
RHBDL2-203ENST00000540558 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
RHBDL2-203ENST00000540558 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
RHBDL2-203ENST00000540558 TEFQ10587 303 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms