RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 ITGB4P16144 1822 aa24.14■■□□□ 1.45
FERMT3-203ENST00000540554 COL24A1Q17RW2 1714 aa24.12■■□□□ 1.45
FERMT3-203ENST00000540554 ZNF827Q17R98 1081 aa24.11■■□□□ 1.45
FERMT3-203ENST00000540554 TAF1LQ8IZX4 1826 aa24.11■■□□□ 1.45
FERMT3-203ENST00000540554 C5P01031 1676 aa24.11■■□□□ 1.45
FERMT3-203ENST00000540554 FHDC1Q9C0D6 1143 aaPredicted RBP24.1■■□□□ 1.45
FERMT3-203ENST00000540554 LRRC4BQ9NT99 713 aa24.1■■□□□ 1.45
FERMT3-203ENST00000540554 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
FERMT3-203ENST00000540554 FYB1O15117 783 aa24.09■■□□□ 1.45
FERMT3-203ENST00000540554 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
FERMT3-203ENST00000540554 USHBP1Q8N6Y0 703 aa24.09■■□□□ 1.45
FERMT3-203ENST00000540554 ZCRB1Q8TBF4 217 aaKnown RBP24.09■■□□□ 1.45
FERMT3-203ENST00000540554 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
FERMT3-203ENST00000540554 PRIM1P49642 420 aaKnown RBP24.07■■□□□ 1.44
FERMT3-203ENST00000540554 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
FERMT3-203ENST00000540554 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
FERMT3-203ENST00000540554 TOGARAM1Q9Y4F4 1720 aa24.06■■□□□ 1.44
FERMT3-203ENST00000540554 NSD2O96028 1365 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 ARXQ96QS3 562 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 SYT17Q9BSW7 474 aa24.05■■□□□ 1.44
FERMT3-203ENST00000540554 FLT4P35916 1363 aa24.04■■□□□ 1.44
FERMT3-203ENST00000540554 NSD3Q9BZ95 1437 aa24.04■■□□□ 1.44
FERMT3-203ENST00000540554 KCNQ4P56696 695 aa24.04■■□□□ 1.44
FERMT3-203ENST00000540554 AKT1S1Q96B36 256 aa24.03■■□□□ 1.44
FERMT3-203ENST00000540554 INSRP06213 1382 aa24.03■■□□□ 1.44
FERMT3-203ENST00000540554 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
FERMT3-203ENST00000540554 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
FERMT3-203ENST00000540554 TFCP2L1Q9NZI6 479 aa24.02■■□□□ 1.44
FERMT3-203ENST00000540554 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
FERMT3-203ENST00000540554 HSP90AB2PQ58FF8 381 aa24■■□□□ 1.43
FERMT3-203ENST00000540554 CCNL1Q9UK58 526 aaPredicted RBP24■■□□□ 1.43
FERMT3-203ENST00000540554 PNPLA7Q6ZV29 1317 aa24■■□□□ 1.43
FERMT3-203ENST00000540554 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
FERMT3-203ENST00000540554 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
FERMT3-203ENST00000540554 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
FERMT3-203ENST00000540554 POLD1P28340 1107 aa23.98■■□□□ 1.43
FERMT3-203ENST00000540554 SLC16A10Q8TF71 515 aa23.97■■□□□ 1.43
FERMT3-203ENST00000540554 MAP3K5Q99683 1374 aa23.97■■□□□ 1.43
FERMT3-203ENST00000540554 EMILIN1Q9Y6C2 1016 aa23.96■■□□□ 1.43
FERMT3-203ENST00000540554 PPM1GO15355 546 aaPredicted RBP23.95■■□□□ 1.42
FERMT3-203ENST00000540554 MSH5O43196 834 aa23.95■■□□□ 1.42
FERMT3-203ENST00000540554 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.42
FERMT3-203ENST00000540554 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
FERMT3-203ENST00000540554 UBR3Q6ZT12 1888 aa23.95■■□□□ 1.42
FERMT3-203ENST00000540554 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
FERMT3-203ENST00000540554 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
FERMT3-203ENST00000540554 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
FERMT3-203ENST00000540554 PALLDQ8WX93 1383 aa23.91■■□□□ 1.42
FERMT3-203ENST00000540554 GPR162Q16538 588 aa23.9■■□□□ 1.42
FERMT3-203ENST00000540554 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
FERMT3-203ENST00000540554 PELP1Q8IZL8 1130 aaKnown RBP23.9■■□□□ 1.42
FERMT3-203ENST00000540554 NCAPD2Q15021 1401 aa23.88■■□□□ 1.41
FERMT3-203ENST00000540554 CYP27B1O15528 508 aa23.87■■□□□ 1.41
FERMT3-203ENST00000540554 ZNF784Q8NCA9 323 aaPredicted RBP23.87■■□□□ 1.41
FERMT3-203ENST00000540554 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
FERMT3-203ENST00000540554 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
FERMT3-203ENST00000540554 COL23A1Q86Y22 540 aaPredicted RBP23.85■■□□□ 1.41
FERMT3-203ENST00000540554 SPG7Q9UQ90 795 aa23.84■■□□□ 1.41
FERMT3-203ENST00000540554 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
FERMT3-203ENST00000540554 HMGB2P26583 209 aaKnown RBP23.82■■□□□ 1.4
FERMT3-203ENST00000540554 TNNT2P45379 298 aaPredicted RBP23.82■■□□□ 1.4
FERMT3-203ENST00000540554 NLGN2Q8NFZ4 835 aa23.82■■□□□ 1.4
FERMT3-203ENST00000540554 SMARCC1Q92922 1105 aaPredicted RBP23.82■■□□□ 1.4
FERMT3-203ENST00000540554 VIRMAQ69YN4 1812 aaKnown RBP23.82■■□□□ 1.4
FERMT3-203ENST00000540554 AK7Q96M32 723 aa23.8■■□□□ 1.4
FERMT3-203ENST00000540554 EYA1Q99502 592 aa23.8■■□□□ 1.4
FERMT3-203ENST00000540554 POLKQ9UBT6 870 aa23.79■■□□□ 1.4
FERMT3-203ENST00000540554 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
FERMT3-203ENST00000540554 PIGBQ92521 554 aa23.78■■□□□ 1.4
FERMT3-203ENST00000540554 EIF4G2P78344 907 aaKnown RBP eCLIP23.77■■□□□ 1.4
FERMT3-203ENST00000540554 TMOD3Q9NYL9 352 aa23.77■■□□□ 1.4
FERMT3-203ENST00000540554 PHF14O94880 888 aa23.76■■□□□ 1.39
FERMT3-203ENST00000540554 EIF4A2Q14240 407 aaKnown RBP23.75■■□□□ 1.39
FERMT3-203ENST00000540554 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
FERMT3-203ENST00000540554 COL5A3P25940 1745 aaPredicted RBP23.75■■□□□ 1.39
FERMT3-203ENST00000540554 HSPA5P11021 654 aaKnown RBP23.74■■□□□ 1.39
FERMT3-203ENST00000540554 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
FERMT3-203ENST00000540554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.74■■□□□ 1.39
FERMT3-203ENST00000540554 UTRNP46939 3433 aa23.74■■□□□ 1.39
FERMT3-203ENST00000540554 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
FERMT3-203ENST00000540554 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
FERMT3-203ENST00000540554 PHKG2P15735 406 aa23.72■■□□□ 1.39
FERMT3-203ENST00000540554 SIK1P57059 783 aa23.72■■□□□ 1.39
FERMT3-203ENST00000540554 PANK3Q9H999 370 aa23.71■■□□□ 1.39
FERMT3-203ENST00000540554 SCN11AQ9UI33 1791 aa23.7■■□□□ 1.39
FERMT3-203ENST00000540554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.7■■□□□ 1.38
FERMT3-203ENST00000540554 YBX3P16989 372 aaKnown RBP eCLIP23.7■■□□□ 1.38
FERMT3-203ENST00000540554 SMIM5Q71RC9 77 aa23.69■■□□□ 1.38
FERMT3-203ENST00000540554 AMIGO3Q86WK7 504 aa23.69■■□□□ 1.38
FERMT3-203ENST00000540554 LINC00116Q8NCU8 138 aa23.69■■□□□ 1.38
FERMT3-203ENST00000540554 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
FERMT3-203ENST00000540554 ASAP1Q9ULH1 1129 aa23.69■■□□□ 1.38
FERMT3-203ENST00000540554 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
FERMT3-203ENST00000540554 IGSF1Q8N6C5 1336 aa23.68■■□□□ 1.38
FERMT3-203ENST00000540554 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
FERMT3-203ENST00000540554 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
FERMT3-203ENST00000540554 N4BP2Q86UW6 1770 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms