RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 AKT1S1Q96B36 256 aa26.83■■□□□ 1.89
SOD2-212ENST00000540491 ARXQ96QS3 562 aa26.83■■□□□ 1.89
SOD2-212ENST00000540491 FHDC1Q9C0D6 1143 aaPredicted RBP26.83■■□□□ 1.89
SOD2-212ENST00000540491 FBLN1P23142 703 aa26.82■■□□□ 1.88
SOD2-212ENST00000540491 RRS1Q15050 365 aaKnown RBP26.82■■□□□ 1.88
SOD2-212ENST00000540491 SYTL4Q96C24 671 aaPredicted RBP26.82■■□□□ 1.88
SOD2-212ENST00000540491 MAP3K5Q99683 1374 aa26.82■■□□□ 1.88
SOD2-212ENST00000540491 ZNF827Q17R98 1081 aa26.81■■□□□ 1.88
SOD2-212ENST00000540491 NBPF6Q5VWK0 638 aa26.81■■□□□ 1.88
SOD2-212ENST00000540491 NBPF4Q96M43 638 aa26.81■■□□□ 1.88
SOD2-212ENST00000540491 INSRP06213 1382 aa26.81■■□□□ 1.88
SOD2-212ENST00000540491 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
SOD2-212ENST00000540491 FLT4P35916 1363 aa26.79■■□□□ 1.88
SOD2-212ENST00000540491 MYOM1P52179 1685 aa26.79■■□□□ 1.88
SOD2-212ENST00000540491 TATP17735 454 aaPredicted RBP26.78■■□□□ 1.88
SOD2-212ENST00000540491 MEGF6O75095 1541 aa26.77■■□□□ 1.88
SOD2-212ENST00000540491 TFCP2L1Q9NZI6 479 aa26.77■■□□□ 1.88
SOD2-212ENST00000540491 POLD1P28340 1107 aa26.76■■□□□ 1.87
SOD2-212ENST00000540491 NSD2O96028 1365 aa26.74■■□□□ 1.87
SOD2-212ENST00000540491 PCDH11XQ9BZA7 1347 aa26.74■■□□□ 1.87
SOD2-212ENST00000540491 PCDH11YQ9BZA8 1340 aa26.74■■□□□ 1.87
SOD2-212ENST00000540491 HSP90AB2PQ58FF8 381 aa26.74■■□□□ 1.87
SOD2-212ENST00000540491 CCNL1Q9UK58 526 aaPredicted RBP26.73■■□□□ 1.87
SOD2-212ENST00000540491 PNPLA7Q6ZV29 1317 aa26.72■■□□□ 1.87
SOD2-212ENST00000540491 CARD14Q9BXL6 1004 aa26.71■■□□□ 1.87
SOD2-212ENST00000540491 QSER1Q2KHR3 1735 aa26.7■■□□□ 1.87
SOD2-212ENST00000540491 UTRNP46939 3433 aa26.7■■□□□ 1.87
SOD2-212ENST00000540491 USHBP1Q8N6Y0 703 aa26.69■■□□□ 1.86
SOD2-212ENST00000540491 NSD3Q9BZ95 1437 aa26.67■■□□□ 1.86
SOD2-212ENST00000540491 DOT1LQ8TEK3 1739 aa26.67■■□□□ 1.86
SOD2-212ENST00000540491 RGPD2P0DJD1 1756 aa26.66■■□□□ 1.86
SOD2-212ENST00000540491 LY75O60449 1722 aa26.66■■□□□ 1.86
SOD2-212ENST00000540491 SHANK3Q9BYB0 1731 aa26.66■■□□□ 1.86
SOD2-212ENST00000540491 FLAD1Q8NFF5 587 aa26.65■■□□□ 1.86
SOD2-212ENST00000540491 SMARCC1Q92922 1105 aaPredicted RBP26.65■■□□□ 1.86
SOD2-212ENST00000540491 KIF20BQ96Q89 1820 aa26.65■■□□□ 1.86
SOD2-212ENST00000540491 WASHC2AQ641Q2 1341 aa26.65■■□□□ 1.86
SOD2-212ENST00000540491 KCNQ4P56696 695 aa26.64■■□□□ 1.86
SOD2-212ENST00000540491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.63■■□□□ 1.85
SOD2-212ENST00000540491 EMILIN1Q9Y6C2 1016 aa26.63■■□□□ 1.85
SOD2-212ENST00000540491 SPG7Q9UQ90 795 aa26.62■■□□□ 1.85
SOD2-212ENST00000540491 CYP27B1O15528 508 aa26.61■■□□□ 1.85
SOD2-212ENST00000540491 NKX1-1Q15270 411 aaPredicted RBP26.61■■□□□ 1.85
SOD2-212ENST00000540491 GPR162Q16538 588 aa26.61■■□□□ 1.85
SOD2-212ENST00000540491 ZNF784Q8NCA9 323 aaPredicted RBP26.61■■□□□ 1.85
SOD2-212ENST00000540491 NCAPD2Q15021 1401 aa26.61■■□□□ 1.85
SOD2-212ENST00000540491 COL24A1Q17RW2 1714 aa26.6■■□□□ 1.85
SOD2-212ENST00000540491 PPM1GO15355 546 aaPredicted RBP26.59■■□□□ 1.85
SOD2-212ENST00000540491 MPRIPQ6WCQ1 1025 aa26.59■■□□□ 1.85
SOD2-212ENST00000540491 PALLDQ8WX93 1383 aa26.58■■□□□ 1.85
SOD2-212ENST00000540491 PLEKHG2Q9H7P9 1386 aa26.58■■□□□ 1.85
SOD2-212ENST00000540491 COL23A1Q86Y22 540 aaPredicted RBP26.58■■□□□ 1.85
SOD2-212ENST00000540491 MSH5O43196 834 aa26.57■■□□□ 1.84
SOD2-212ENST00000540491 KLHL34Q8N239 644 aa26.55■■□□□ 1.84
SOD2-212ENST00000540491 POLKQ9UBT6 870 aa26.55■■□□□ 1.84
SOD2-212ENST00000540491 EYA1Q99502 592 aa26.54■■□□□ 1.84
SOD2-212ENST00000540491 CHD4Q14839 1912 aa26.54■■□□□ 1.84
SOD2-212ENST00000540491 GRIN3BO60391 1043 aa26.53■■□□□ 1.84
SOD2-212ENST00000540491 EIF4G2P78344 907 aaKnown RBP eCLIP26.52■■□□□ 1.84
SOD2-212ENST00000540491 IFNL2Q8IZJ0 200 aa26.52■■□□□ 1.84
SOD2-212ENST00000540491 PIGBQ92521 554 aa26.52■■□□□ 1.84
SOD2-212ENST00000540491 AK7Q96M32 723 aa26.51■■□□□ 1.83
SOD2-212ENST00000540491 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
SOD2-212ENST00000540491 TUBGCP6Q96RT7 1819 aa26.51■■□□□ 1.83
SOD2-212ENST00000540491 PKD1L3Q7Z443 1732 aa26.51■■□□□ 1.83
SOD2-212ENST00000540491 ANKRD26Q9UPS8 1709 aa26.51■■□□□ 1.83
SOD2-212ENST00000540491 CD2APQ9Y5K6 639 aa26.5■■□□□ 1.83
SOD2-212ENST00000540491 TMOD3Q9NYL9 352 aa26.48■■□□□ 1.83
SOD2-212ENST00000540491 C5P01031 1676 aa26.47■■□□□ 1.83
SOD2-212ENST00000540491 NLGN2Q8NFZ4 835 aa26.47■■□□□ 1.83
SOD2-212ENST00000540491 POLR3GLQ9BT43 218 aa26.47■■□□□ 1.83
SOD2-212ENST00000540491 LOC102724428A0A0B4J2F2 783 aa26.46■■□□□ 1.83
SOD2-212ENST00000540491 PHKG2P15735 406 aa26.46■■□□□ 1.83
SOD2-212ENST00000540491 SSFA2P28290 1259 aa26.46■■□□□ 1.83
SOD2-212ENST00000540491 SIK1P57059 783 aa26.46■■□□□ 1.83
SOD2-212ENST00000540491 PELP1Q8IZL8 1130 aaKnown RBP26.46■■□□□ 1.83
SOD2-212ENST00000540491 EIF4A2Q14240 407 aaKnown RBP26.45■■□□□ 1.82
SOD2-212ENST00000540491 MAP2P11137 1827 aaKnown RBP26.44■■□□□ 1.82
SOD2-212ENST00000540491 HSP90AB1P08238 724 aaKnown RBP26.44■■□□□ 1.82
SOD2-212ENST00000540491 GOLGB1Q14789 3259 aaKnown RBP26.43■■□□□ 1.82
SOD2-212ENST00000540491 MSL1Q68DK7 614 aa26.42■■□□□ 1.82
SOD2-212ENST00000540491 PANK3Q9H999 370 aa26.42■■□□□ 1.82
SOD2-212ENST00000540491 ITGB4P16144 1822 aa26.42■■□□□ 1.82
SOD2-212ENST00000540491 IGSF1Q8N6C5 1336 aa26.41■■□□□ 1.82
SOD2-212ENST00000540491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.41■■□□□ 1.82
SOD2-212ENST00000540491 TAF1LQ8IZX4 1826 aa26.41■■□□□ 1.82
SOD2-212ENST00000540491 C4BP0C0L5 1744 aa26.4■■□□□ 1.82
SOD2-212ENST00000540491 TOGARAM1Q9Y4F4 1720 aa26.4■■□□□ 1.82
SOD2-212ENST00000540491 ERVV-2B6SEH9 535 aa26.4■■□□□ 1.82
SOD2-212ENST00000540491 HSPA5P11021 654 aaKnown RBP26.4■■□□□ 1.82
SOD2-212ENST00000540491 TNNT2P45379 298 aaPredicted RBP26.4■■□□□ 1.82
SOD2-212ENST00000540491 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.82
SOD2-212ENST00000540491 ATP6V1AP38606 617 aa26.38■■□□□ 1.81
SOD2-212ENST00000540491 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
SOD2-212ENST00000540491 PLEKHO1Q53GL0 409 aaPredicted RBP26.38■■□□□ 1.81
SOD2-212ENST00000540491 DCAF5Q96JK2 942 aa26.38■■□□□ 1.81
SOD2-212ENST00000540491 ASAP1Q9ULH1 1129 aa26.38■■□□□ 1.81
SOD2-212ENST00000540491 YBX3P16989 372 aaKnown RBP eCLIP26.37■■□□□ 1.818e-7■□□□□ 8.9
SOD2-212ENST00000540491 LINC00116Q8NCU8 138 aa26.36■■□□□ 1.81
SOD2-212ENST00000540491 ATG3Q9NT62 314 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms