RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
LDHA-218ENST00000540430 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
LDHA-218ENST00000540430 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
LDHA-218ENST00000540430 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
LDHA-218ENST00000540430 TPM2P07951 284 aa11.86□□□□□ -0.51
LDHA-218ENST00000540430 NLRP6P59044 892 aa11.86□□□□□ -0.51
LDHA-218ENST00000540430 LRP5O75197 1615 aa11.85□□□□□ -0.51
LDHA-218ENST00000540430 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
LDHA-218ENST00000540430 SLIT3O75094 1523 aa11.85□□□□□ -0.51
LDHA-218ENST00000540430 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
LDHA-218ENST00000540430 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
LDHA-218ENST00000540430 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
LDHA-218ENST00000540430 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
LDHA-218ENST00000540430 PRDM4Q9UKN5 801 aa11.85□□□□□ -0.51
LDHA-218ENST00000540430 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
LDHA-218ENST00000540430 TRIM37O94972 964 aa11.84□□□□□ -0.51
LDHA-218ENST00000540430 MCM4P33991 863 aa11.84□□□□□ -0.51
LDHA-218ENST00000540430 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
LDHA-218ENST00000540430 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
LDHA-218ENST00000540430 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
LDHA-218ENST00000540430 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
LDHA-218ENST00000540430 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
LDHA-218ENST00000540430 CRB1P82279 1406 aa11.83□□□□□ -0.51
LDHA-218ENST00000540430 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.51
LDHA-218ENST00000540430 ESPNB1AK53 854 aa11.83□□□□□ -0.51
LDHA-218ENST00000540430 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
LDHA-218ENST00000540430 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
LDHA-218ENST00000540430 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
LDHA-218ENST00000540430 SLFN5Q08AF3 891 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
LDHA-218ENST00000540430 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
LDHA-218ENST00000540430 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 APBA3O96018 575 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 TTC21AQ8NDW8 1320 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 SEC24BO95487 1268 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 TBC1D2Q9BYX2 928 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 COL18A1P39060 1754 aa11.81□□□□□ -0.52
LDHA-218ENST00000540430 CPSF1Q10570 1443 aaKnown RBP11.81□□□□□ -0.52
LDHA-218ENST00000540430 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
LDHA-218ENST00000540430 CC2D1BQ5T0F9 858 aaKnown RBP11.8□□□□□ -0.52
LDHA-218ENST00000540430 GRPEL1Q9HAV7 217 aa11.8□□□□□ -0.52
LDHA-218ENST00000540430 TRAK2O60296 914 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 PDE4CQ08493 712 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
LDHA-218ENST00000540430 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 IGHDP01880 384 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.525e-7■□□□□ 10.4
LDHA-218ENST00000540430 TOM1L2Q6ZVM7 507 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 RREB1Q92766 1687 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
LDHA-218ENST00000540430 TERF1P54274 439 aa11.77□□□□□ -0.52
LDHA-218ENST00000540430 CLUAP1Q96AJ1 413 aa11.77□□□□□ -0.52
LDHA-218ENST00000540430 TESK2Q96S53 571 aa11.77□□□□□ -0.52
LDHA-218ENST00000540430 PANK3Q9H999 370 aa11.77□□□□□ -0.52
LDHA-218ENST00000540430 LRRC37A3O60309 1634 aa11.77□□□□□ -0.52
LDHA-218ENST00000540430 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.53
LDHA-218ENST00000540430 DDB1Q16531 1140 aa11.77□□□□□ -0.53
LDHA-218ENST00000540430 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
LDHA-218ENST00000540430 PEAK1Q9H792 1746 aa11.77□□□□□ -0.53
LDHA-218ENST00000540430 NFAT5O94916 1531 aa11.76□□□□□ -0.53
LDHA-218ENST00000540430 ABCC6O95255 1503 aa11.76□□□□□ -0.53
LDHA-218ENST00000540430 TRIM44Q96DX7 344 aaPredicted RBP11.76□□□□□ -0.53
LDHA-218ENST00000540430 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
LDHA-218ENST00000540430 NUP188Q5SRE5 1749 aa11.76□□□□□ -0.53
LDHA-218ENST00000540430 RGPD5Q99666 1765 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 E9PSI1 815 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 SOX12O15370 315 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 ERBB4Q15303 1308 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 TMF1P82094 1093 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
LDHA-218ENST00000540430 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 CD163L1Q9NR16 1453 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 PTMSP20962 102 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 MAP7D2Q96T17 732 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
LDHA-218ENST00000540430 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 BCL9O00512 1426 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 PPP2R1AP30153 589 aa11.74□□□□□ -0.53
LDHA-218ENST00000540430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.74□□□□□ -0.53
LDHA-218ENST00000540430 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
LDHA-218ENST00000540430 HDGFL2Q7Z4V5 671 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms