RNA–Protein interactions for RNA: ENST00000540382.5

ARL6IP4-217, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 5

Gene ARL6IP4, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-217	ENST00000540382	SENP3-EIF4A1	A0A087X0R7	540 aa		33.57	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	MTHFSD	Q2M296	383 aa	Known RBP	33.57	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.57	■■■□□ 2.96	3e-20	■□□□□ 8.7
ARL6IP4-217	ENST00000540382	OVOS2	A0A0G2JMS6	1433 aa		33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	WNK3	Q9BYP7	1800 aa		33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	ILDR1	Q86SU0	546 aa	Predicted RBP	33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	GAS2L2	Q8NHY3	880 aa		33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	TRPC5	Q9UL62	973 aa	Predicted RBP	33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	ATRN	O75882	1429 aa		33.56	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	RRP7A	Q9Y3A4	280 aa	Known RBP	33.55	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	DISP2	A7MBM2	1401 aa		33.55	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	BARGIN	Q6ZT62	677 aa		33.54	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	PKD1L3	Q7Z443	1732 aa		33.53	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	NEUROD2	Q15784	382 aa		33.53	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.53	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	DLG5	Q8TDM6	1919 aa		33.53	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	RIPK4	P57078	832 aa		33.52	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	SALL2	Q9Y467	1007 aa	Predicted RBP	33.52	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	SPG7	Q9UQ90	795 aa		33.52	■■■□□ 2.96
ARL6IP4-217	ENST00000540382	CCDC27	Q2M243	656 aa		33.51	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	ZNF772	Q68DY9	489 aa	Predicted RBP	33.51	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	ZBED9	Q6R2W3	1325 aa		33.5	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	GJD4	Q96KN9	370 aa	Predicted RBP	33.5	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	QTRT2	Q9H974	415 aa	Known RBP	33.49	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	PHF23	Q9BUL5	403 aa	Predicted RBP	33.48	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	GLI3	P10071	1580 aa		33.47	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	ZCRB1	Q8TBF4	217 aa	Known RBP	33.47	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.46	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	TRIM35	Q9UPQ4	493 aa		33.46	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	LMOD3	Q0VAK6	560 aa		33.45	■■■□□ 2.95
ARL6IP4-217	ENST00000540382	WWC1	Q8IX03	1113 aa		33.45	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	AKAP4	Q5JQC9	854 aa		33.44	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	GNAT3	A8MTJ3	354 aa		33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	HTATSF1	O43719	755 aa	Known RBP	33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	FAM98C	Q17RN3	349 aa	Known RBP	33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	ZNF521	Q96K83	1311 aa		33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	MAP3K5	Q99683	1374 aa		33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	SHANK3	Q9BYB0	1731 aa		33.43	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	C1orf141	Q5JVX7	400 aa		33.42	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	PCDH11X	Q9BZA7	1347 aa		33.42	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	PCDH11Y	Q9BZA8	1340 aa		33.42	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	EXOC5	O00471	708 aa		33.41	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	IFNL2	Q8IZJ0	200 aa		33.41	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	CYP27B1	O15528	508 aa		33.39	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	PHKG2	P15735	406 aa		33.39	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	RTF1	Q92541	710 aa	Known RBP	33.39	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	ONECUT3	O60422	494 aa	Predicted RBP	33.39	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	TNS2	Q63HR2	1409 aa		33.39	■■■□□ 2.94
ARL6IP4-217	ENST00000540382	THSD7A	Q9UPZ6	1657 aa		33.38	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	LRRC37A3	O60309	1634 aa		33.38	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	DDB1	Q16531	1140 aa		33.37	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	WDR63	Q8IWG1	891 aa		33.37	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	RGS17	Q9UGC6	210 aa	Predicted RBP	33.35	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	DCTN1	Q14203	1278 aa		33.34	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	DDX54	Q8TDD1	881 aa	Known RBP	33.34	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	HSP90AB1	P08238	724 aa	Known RBP	33.33	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	RBM6	P78332	1123 aa	Known RBP	33.33	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	MCM10	Q7L590	875 aa		33.33	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	PDE3B	Q13370	1112 aa		33.33	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	IL17RE	Q8NFR9	667 aa		33.33	■■■□□ 2.93
ARL6IP4-217	ENST00000540382	ADAMTS7	Q9UKP4	1686 aa		33.32	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	VIRMA	Q69YN4	1812 aa	Known RBP	33.32	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	CALD1	Q05682	793 aa	Known RBP	33.32	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	GOLGA2	Q08379	1002 aa		33.31	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	NKX1-1	Q15270	411 aa	Predicted RBP	33.31	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	MPRIP	Q6WCQ1	1025 aa		33.31	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	THUMPD2	Q9BTF0	503 aa	Known RBP	33.3	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	CEMIP	Q8WUJ3	1361 aa		33.3	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	DCAF5	Q96JK2	942 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	SCN11A	Q9UI33	1791 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	IL16	Q14005	1332 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382		A0A0G2JS52	829 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	MYT1	Q01538	1121 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	LGR6	Q9HBX8	967 aa		33.29	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	RNMT	O43148	476 aa	Known RBP	33.28	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	KDM6A	O15550	1401 aa	Predicted RBP	33.27	■■■□□ 2.92
ARL6IP4-217	ENST00000540382	SEPT12	Q8IYM1	358 aa		33.26	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	RXRB	P28702	533 aa		33.25	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	CDCA7L	Q96GN5	454 aa		33.24	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	POTEA	Q6S8J7	498 aa		33.23	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	MARCH10	Q8NA82	808 aa	Predicted RBP	33.23	■■■□□ 2.91
ARL6IP4-217	ENST00000540382		E9PSI1	815 aa		33.23	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	SLFN5	Q08AF3	891 aa		33.23	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.23	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	IFT57	Q9NWB7	429 aa		33.21	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	TEF	Q10587	303 aa		33.2	■■■□□ 2.91
ARL6IP4-217	ENST00000540382	ZNF853	P0CG23	659 aa		33.2	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	CFAP44	Q96MT7	982 aa		33.2	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	GNAI1	P63096	354 aa		33.19	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	TRMT2A	Q8IZ69	625 aa	Known RBP	33.19	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	ERVV-2	B6SEH9	535 aa		33.18	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	TAF7	Q15545	349 aa	Predicted RBP	33.18	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	SIPA1L3	O60292	1781 aa	Predicted RBP	33.18	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	MRC1	P22897	1456 aa		33.18	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	MYH16	Q9H6N6	1097 aa		33.17	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	SLC52A2	Q9HAB3	445 aa		33.17	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	TOGARAM1	Q9Y4F4	1720 aa		33.16	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	BABAM1	Q9NWV8	329 aa		33.16	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	LAS1L	Q9Y4W2	734 aa	Known RBP	33.16	■■■□□ 2.9
ARL6IP4-217	ENST00000540382	CHL1	O00533	1208 aa		33.15	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms