RNA–Protein interactions for RNA: ENST00000540168.1

KDM5A-206, Transcript of lysine demethylase 5A, humanhuman

TSL 5

Gene KDM5A, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-206ENST00000540168 CACNA1FO60840 1977 aa9.65□□□□□ -0.86
KDM5A-206ENST00000540168 LRRC37A3O60309 1634 aa9.65□□□□□ -0.86
KDM5A-206ENST00000540168 PKD1L3Q7Z443 1732 aa9.65□□□□□ -0.87
KDM5A-206ENST00000540168 HTATSF1O43719 755 aaKnown RBP9.64□□□□□ -0.87
KDM5A-206ENST00000540168 GNAI1P63096 354 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 FKBP8Q14318 412 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 CHRNA2Q15822 529 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.64□□□□□ -0.87
KDM5A-206ENST00000540168 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
KDM5A-206ENST00000540168 IFT57Q9NWB7 429 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 SHANK3Q9BYB0 1731 aa9.64□□□□□ -0.87
KDM5A-206ENST00000540168 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
KDM5A-206ENST00000540168 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
KDM5A-206ENST00000540168 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
KDM5A-206ENST00000540168 RRP1P56182 461 aaKnown RBP9.63□□□□□ -0.87
KDM5A-206ENST00000540168 NBPF6Q5VWK0 638 aa9.63□□□□□ -0.87
KDM5A-206ENST00000540168 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
KDM5A-206ENST00000540168 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
KDM5A-206ENST00000540168 NBPF4Q96M43 638 aa9.63□□□□□ -0.87
KDM5A-206ENST00000540168 BCL9LQ86UU0 1499 aa9.63□□□□□ -0.87
KDM5A-206ENST00000540168 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 ADAMTS2O95450 1211 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 AMOTQ4VCS5 1084 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 SCN11AQ9UI33 1791 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 GLI3P10071 1580 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
KDM5A-206ENST00000540168 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 GNAT3A8MTJ3 354 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
KDM5A-206ENST00000540168 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
KDM5A-206ENST00000540168 FNBP4Q8N3X1 1017 aaPredicted RBP9.61□□□□□ -0.87
KDM5A-206ENST00000540168 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 CFAP44Q96MT7 982 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 CRB1P82279 1406 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
KDM5A-206ENST00000540168 OVOS2A0A0G2JMS6 1433 aa9.6□□□□□ -0.87
KDM5A-206ENST00000540168 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
KDM5A-206ENST00000540168 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
KDM5A-206ENST00000540168 BTG4Q9NY30 223 aa9.6□□□□□ -0.87
KDM5A-206ENST00000540168 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
KDM5A-206ENST00000540168 SIPA1L3O60292 1781 aaPredicted RBP9.6□□□□□ -0.87
KDM5A-206ENST00000540168 ATRNO75882 1429 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 ZNF853P0CG23 659 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 TATP17735 454 aaPredicted RBP9.59□□□□□ -0.87
KDM5A-206ENST00000540168 RAPGEF4Q8WZA2 1011 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 TSR2Q969E8 191 aaKnown RBP9.59□□□□□ -0.87
KDM5A-206ENST00000540168 C8orf37Q96NL8 207 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.871e-8■■■□□ 17.8
KDM5A-206ENST00000540168 KDM3BQ7LBC6 1761 aa9.59□□□□□ -0.87
KDM5A-206ENST00000540168 AFF2P51816 1311 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 DISP2A7MBM2 1401 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 MEGF6O75095 1541 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 SOCS7O14512 581 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 AKAP4Q5JQC9 854 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
KDM5A-206ENST00000540168 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
KDM5A-206ENST00000540168 LAS1LQ9Y4W2 734 aaKnown RBP9.58□□□□□ -0.88
KDM5A-206ENST00000540168 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
KDM5A-206ENST00000540168 ZNF530Q6P9A1 599 aaPredicted RBP9.57□□□□□ -0.88
KDM5A-206ENST00000540168 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
KDM5A-206ENST00000540168 UNC5CLQ8IV45 518 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
KDM5A-206ENST00000540168 CARD10Q9BWT7 1032 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 MBIPQ9NS73 344 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
KDM5A-206ENST00000540168 CEMIPQ8WUJ3 1361 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 CHL1O00533 1208 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 RARSP54136 660 aaKnown RBP9.56□□□□□ -0.88
KDM5A-206ENST00000540168 EVA1CP58658 441 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 IRX6P78412 446 aaPredicted RBP9.56□□□□□ -0.88
KDM5A-206ENST00000540168 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 VPS72Q15906 364 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 ALDH1L2Q3SY69 923 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 TOM1L2Q6ZVM7 507 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 MCM10Q7L590 875 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
KDM5A-206ENST00000540168 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
KDM5A-206ENST00000540168 HSP90AB1P08238 724 aaKnown RBP9.55□□□□□ -0.88
KDM5A-206ENST00000540168 MS4A1P11836 297 aa9.55□□□□□ -0.88
KDM5A-206ENST00000540168 CANXP27824 592 aaKnown RBP9.55□□□□□ -0.88
KDM5A-206ENST00000540168 USP21Q9UK80 565 aa9.55□□□□□ -0.88
KDM5A-206ENST00000540168 TNS2Q63HR2 1409 aa9.55□□□□□ -0.88
KDM5A-206ENST00000540168 KIF16BQ96L93 1317 aa9.55□□□□□ -0.88
KDM5A-206ENST00000540168 TOGARAM1Q9Y4F4 1720 aa9.54□□□□□ -0.88
KDM5A-206ENST00000540168 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
KDM5A-206ENST00000540168 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
KDM5A-206ENST00000540168 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
KDM5A-206ENST00000540168 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
KDM5A-206ENST00000540168 TSPYL4Q9UJ04 414 aa9.54□□□□□ -0.88
KDM5A-206ENST00000540168 KAT6BQ8WYB5 2073 aa9.54□□□□□ -0.88
KDM5A-206ENST00000540168 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms