RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 EFCAB2Q5VUJ9 269 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 SUPT6HQ7KZ85 1726 aaKnown RBP6.72□□□□□ -1.33
C2CD3-214ENST00000540057 ZNF142P52746 1687 aaPredicted RBP6.71□□□□□ -1.33
C2CD3-214ENST00000540057 LINC01559Q495D7 138 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 MYSM1Q5VVJ2 828 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 LYPD8Q6UX82 237 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 RIC3Q7Z5B4 369 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 CABLES1Q8TDN4 633 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 MROH2AA6NES4 1674 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 CPS1P31327 1500 aa6.71□□□□□ -1.34
C2CD3-214ENST00000540057 MYO5CQ9NQX4 1742 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 MYO3AQ8NEV4 1616 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 F12P00748 615 aaPredicted RBP6.7□□□□□ -1.34
C2CD3-214ENST00000540057 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
C2CD3-214ENST00000540057 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
C2CD3-214ENST00000540057 EHBP1Q8NDI1 1231 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 ZBTB3Q9H5J0 574 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 ATP13A2Q9NQ11 1180 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 MLH3Q9UHC1 1453 aa6.7□□□□□ -1.34
C2CD3-214ENST00000540057 CDK13Q14004 1512 aaKnown RBP6.7□□□□□ -1.34
C2CD3-214ENST00000540057 ZMYM3Q14202 1370 aa6.69□□□□□ -1.34
C2CD3-214ENST00000540057 CEP170BQ9Y4F5 1589 aaPredicted RBP6.69□□□□□ -1.34
C2CD3-214ENST00000540057 ALDH1A1P00352 501 aa6.69□□□□□ -1.34
C2CD3-214ENST00000540057 QPCTQ16769 361 aa6.69□□□□□ -1.34
C2CD3-214ENST00000540057 ZNF511Q8NB15 262 aa6.69□□□□□ -1.34
C2CD3-214ENST00000540057 BAP1Q92560 729 aa6.69□□□□□ -1.34
C2CD3-214ENST00000540057 PTPRKQ15262 1439 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 SHANK2Q9UPX8 1470 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 TUSC1Q2TAM9 212 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 POTEAQ6S8J7 498 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 MAP10Q9P2G4 905 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 TLL2Q9Y6L7 1015 aa6.68□□□□□ -1.34
C2CD3-214ENST00000540057 PER1O15534 1290 aaPredicted RBP6.67□□□□□ -1.34
C2CD3-214ENST00000540057 RANGAP1P46060 587 aaPredicted RBP6.67□□□□□ -1.34
C2CD3-214ENST00000540057 CSPP1Q1MSJ5 1256 aa6.67□□□□□ -1.34
C2CD3-214ENST00000540057 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
C2CD3-214ENST00000540057 ARHGAP5Q13017 1502 aa6.66□□□□□ -1.34
C2CD3-214ENST00000540057 NEURL4Q96JN8 1562 aa6.66□□□□□ -1.34
C2CD3-214ENST00000540057 KIF14Q15058 1648 aa6.66□□□□□ -1.34
C2CD3-214ENST00000540057 C11orf95C9JLR9 678 aaPredicted RBP6.66□□□□□ -1.34
C2CD3-214ENST00000540057 LILRB3O75022 631 aa6.66□□□□□ -1.34
C2CD3-214ENST00000540057 SNRPBP14678 240 aaKnown RBP6.66□□□□□ -1.34
C2CD3-214ENST00000540057 TRIM47Q96LD4 638 aa6.66□□□□□ -1.34
C2CD3-214ENST00000540057 POLR1AO95602 1720 aaPredicted RBP6.66□□□□□ -1.34
C2CD3-214ENST00000540057 VWDEQ8N2E2 1590 aa6.65□□□□□ -1.34
C2CD3-214ENST00000540057 DNMT1P26358 1616 aaKnown RBP6.65□□□□□ -1.34
C2CD3-214ENST00000540057 CLTCQ00610 1675 aaKnown RBP6.65□□□□□ -1.34
C2CD3-214ENST00000540057 SETD1AO15047 1707 aaKnown RBP6.65□□□□□ -1.34
C2CD3-214ENST00000540057 CDC42BPBQ9Y5S2 1711 aa6.64□□□□□ -1.35
C2CD3-214ENST00000540057 VARSP26640 1264 aaKnown RBP6.64□□□□□ -1.35
C2CD3-214ENST00000540057 CTHP32929 405 aa6.64□□□□□ -1.35
C2CD3-214ENST00000540057 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-214ENST00000540057 TREML4Q6UXN2 200 aa6.64□□□□□ -1.35
C2CD3-214ENST00000540057 MPNDQ8N594 471 aa6.64□□□□□ -1.35
C2CD3-214ENST00000540057 A2ML1A8K2U0 1454 aa6.64□□□□□ -1.35
C2CD3-214ENST00000540057 ABCC1P33527 1531 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 CLK2P49760 499 aaKnown RBP6.63□□□□□ -1.35
C2CD3-214ENST00000540057 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 TRIM46Q7Z4K8 759 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 ITSN2Q9NZM3 1697 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
C2CD3-214ENST00000540057 STRCP1A6NGW2 1772 aa6.62□□□□□ -1.35
C2CD3-214ENST00000540057 BMP1P13497 986 aa6.62□□□□□ -1.35
C2CD3-214ENST00000540057 NFX1Q12986 1120 aaKnown RBP6.62□□□□□ -1.35
C2CD3-214ENST00000540057 FBXO31Q5XUX0 539 aaPredicted RBP6.62□□□□□ -1.35
C2CD3-214ENST00000540057 SENP2Q9HC62 589 aa6.62□□□□□ -1.35
C2CD3-214ENST00000540057 RNF17Q9BXT8 1623 aaKnown RBP6.61□□□□□ -1.35
C2CD3-214ENST00000540057 LRRC7Q96NW7 1537 aa6.61□□□□□ -1.35
C2CD3-214ENST00000540057 TROQ12816 1431 aaPredicted RBP6.61□□□□□ -1.35
C2CD3-214ENST00000540057 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
C2CD3-214ENST00000540057 NUTM2BA6NNL0 878 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 NUTM2EB1AL46 878 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 NNTQ13423 1086 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 NUTM2DQ5VT03 806 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 GGT6Q6P531 493 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 NUTM2AQ8IVF1 878 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 TSC1Q92574 1164 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 CDK15Q96Q40 435 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 KLF16Q9BXK1 252 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 CDK11AQ9UQ88 783 aaPredicted RBP6.6□□□□□ -1.35
C2CD3-214ENST00000540057 PREX2Q70Z35 1606 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 SAMD9LQ8IVG5 1584 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 MED14O60244 1454 aa6.6□□□□□ -1.35
C2CD3-214ENST00000540057 NPHP4O75161 1426 aaPredicted RBP6.59□□□□□ -1.35
C2CD3-214ENST00000540057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.59□□□□□ -1.35
C2CD3-214ENST00000540057 WFS1O76024 890 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 ADH1CP00326 375 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 TIMP2P16035 220 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 ANKLE2Q86XL3 938 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 FAM174AQ8TBP5 190 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 KIFC2Q96AC6 838 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 C1QTNF2Q9BXJ5 285 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 KDM4CQ9H3R0 1056 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms