RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
CCDC60-204ENST00000539847 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
CCDC60-204ENST00000539847 GPHNQ9NQX3 736 aaPredicted RBP10.11□□□□□ -0.79
CCDC60-204ENST00000539847 TRIM35Q9UPQ4 493 aa10.11□□□□□ -0.79
CCDC60-204ENST00000539847 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
CCDC60-204ENST00000539847 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 PLCH1Q4KWH8 1693 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
CCDC60-204ENST00000539847 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
CCDC60-204ENST00000539847 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 POGKQ9P215 609 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 PARD3Q8TEW0 1356 aa10.1□□□□□ -0.79
CCDC60-204ENST00000539847 SPATA31A5Q5VU36 1347 aa10.09□□□□□ -0.79
CCDC60-204ENST00000539847 SPATA31A7Q8IWB4 1347 aa10.09□□□□□ -0.79
CCDC60-204ENST00000539847 POTEHQ6S545 545 aa10.09□□□□□ -0.79
CCDC60-204ENST00000539847 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
CCDC60-204ENST00000539847 ABCA3Q99758 1704 aa10.09□□□□□ -0.79
CCDC60-204ENST00000539847 COL14A1Q05707 1796 aaKnown RBP10.09□□□□□ -0.79
CCDC60-204ENST00000539847 FAM98CQ17RN3 349 aaKnown RBP10.08□□□□□ -0.8
CCDC60-204ENST00000539847 RBM26Q5T8P6 1007 aaKnown RBP10.08□□□□□ -0.8
CCDC60-204ENST00000539847 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
CCDC60-204ENST00000539847 ADGRB1O14514 1584 aa10.08□□□□□ -0.8
CCDC60-204ENST00000539847 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 RALBP1Q15311 655 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 NBPF8Q3BBV2 869 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 AK7Q96M32 723 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
CCDC60-204ENST00000539847 TRPM3Q9HCF6 1732 aaPredicted RBP10.07□□□□□ -0.8
CCDC60-204ENST00000539847 ALS2Q96Q42 1657 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
CCDC60-204ENST00000539847 A0A0G2JS52 829 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
CCDC60-204ENST00000539847 DSG2Q14126 1118 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 FAM196AQ6ZSG2 479 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 PMFBP1Q8TBY8 1022 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 PRDM11Q9NQV5 511 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 THSD7AQ9UPZ6 1657 aa10.06□□□□□ -0.8
CCDC60-204ENST00000539847 ATP7BP35670 1465 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 RGPD1P0DJD0 1748 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 DPYSL4O14531 572 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 EVX2Q03828 476 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 MICALL2Q8IY33 904 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 PRR36Q9H6K5 1346 aa10.05□□□□□ -0.8
CCDC60-204ENST00000539847 RGPD8O14715 1765 aaPredicted RBP10.04□□□□□ -0.8
CCDC60-204ENST00000539847 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
CCDC60-204ENST00000539847 SAFB2Q14151 953 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC60-204ENST00000539847 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
CCDC60-204ENST00000539847 DDRGK1Q96HY6 314 aa10.04□□□□□ -0.8
CCDC60-204ENST00000539847 PSDA5PKW4 1024 aaPredicted RBP10.03□□□□□ -0.8
CCDC60-204ENST00000539847 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
CCDC60-204ENST00000539847 CAMKK2Q96RR4 588 aa10.03□□□□□ -0.8
CCDC60-204ENST00000539847 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
CCDC60-204ENST00000539847 POLR3AO14802 1390 aaPredicted RBP10.02□□□□□ -0.8
CCDC60-204ENST00000539847 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
CCDC60-204ENST00000539847 R3HDM1Q15032 1099 aaKnown RBP10.02□□□□□ -0.81
CCDC60-204ENST00000539847 BACH2Q9BYV9 841 aa10.02□□□□□ -0.81
CCDC60-204ENST00000539847 TRAK1Q9UPV9 953 aa10.02□□□□□ -0.81
CCDC60-204ENST00000539847 MINK1Q8N4C8 1332 aaPredicted RBP10.02□□□□□ -0.81
CCDC60-204ENST00000539847 CPDO75976 1380 aa10.01□□□□□ -0.81
CCDC60-204ENST00000539847 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
CCDC60-204ENST00000539847 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
CCDC60-204ENST00000539847 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
CCDC60-204ENST00000539847 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
CCDC60-204ENST00000539847 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
CCDC60-204ENST00000539847 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
CCDC60-204ENST00000539847 RRP1P56182 461 aaKnown RBP10□□□□□ -0.81
CCDC60-204ENST00000539847 GPIHBP1Q8IV16 184 aa10□□□□□ -0.81
CCDC60-204ENST00000539847 IL27Q8NEV9 243 aa10□□□□□ -0.81
CCDC60-204ENST00000539847 TMC2Q8TDI7 906 aa10□□□□□ -0.81
CCDC60-204ENST00000539847 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
CCDC60-204ENST00000539847 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 TNS1Q9HBL0 1735 aaKnown RBP9.99□□□□□ -0.81
CCDC60-204ENST00000539847 HAX1O00165 279 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 FOXK1P85037 733 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 EZH2Q15910 746 aaKnown RBP9.99□□□□□ -0.81
CCDC60-204ENST00000539847 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 KRI1Q8N9T8 703 aaKnown RBP9.99□□□□□ -0.81
CCDC60-204ENST00000539847 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 USP19O94966 1318 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 MYBBP1AQ9BQG0 1328 aaKnown RBP9.99□□□□□ -0.81
CCDC60-204ENST00000539847 ITSN1Q15811 1721 aa9.99□□□□□ -0.81
CCDC60-204ENST00000539847 TRIM37O94972 964 aa9.98□□□□□ -0.81
CCDC60-204ENST00000539847 APBA3O96018 575 aa9.98□□□□□ -0.81
CCDC60-204ENST00000539847 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
CCDC60-204ENST00000539847 DCAF11Q8TEB1 546 aa9.98□□□□□ -0.81
CCDC60-204ENST00000539847 USP47Q96K76 1375 aa9.98□□□□□ -0.81
CCDC60-204ENST00000539847 ATMINO43313 823 aaPredicted RBP9.97□□□□□ -0.81
CCDC60-204ENST00000539847 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
CCDC60-204ENST00000539847 PDIA6Q15084 440 aa9.97□□□□□ -0.81
CCDC60-204ENST00000539847 FAM182BQ5T319 152 aa9.97□□□□□ -0.81
CCDC60-204ENST00000539847 RCAN3Q9UKA8 241 aa9.97□□□□□ -0.81
CCDC60-204ENST00000539847 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
CCDC60-204ENST00000539847 EVA1CP58658 441 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms