RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 A0A0G2JS52 829 aa20.45■□□□□ 0.86
DDB1-216ENST00000539739 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
DDB1-216ENST00000539739 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
DDB1-216ENST00000539739 GLI3P10071 1580 aa20.43■□□□□ 0.86
DDB1-216ENST00000539739 AMOTQ4VCS5 1084 aa20.43■□□□□ 0.86
DDB1-216ENST00000539739 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
DDB1-216ENST00000539739 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
DDB1-216ENST00000539739 EXOC5O00471 708 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 ONECUT3O60422 494 aaPredicted RBP20.42■□□□□ 0.86
DDB1-216ENST00000539739 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 SPG7Q9UQ90 795 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 DISP2A7MBM2 1401 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 MEGF6O75095 1541 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 PLEKHF1Q96S99 279 aa20.42■□□□□ 0.86
DDB1-216ENST00000539739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.86
DDB1-216ENST00000539739 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
DDB1-216ENST00000539739 DDB1Q16531 1140 aa20.41■□□□□ 0.86
DDB1-216ENST00000539739 ZCRB1Q8TBF4 217 aaKnown RBP20.41■□□□□ 0.86
DDB1-216ENST00000539739 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.86
DDB1-216ENST00000539739 SEPT12Q8IYM1 358 aa20.39■□□□□ 0.86
DDB1-216ENST00000539739 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.86
DDB1-216ENST00000539739 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.85
DDB1-216ENST00000539739 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
DDB1-216ENST00000539739 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
DDB1-216ENST00000539739 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
DDB1-216ENST00000539739 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
DDB1-216ENST00000539739 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
DDB1-216ENST00000539739 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
DDB1-216ENST00000539739 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
DDB1-216ENST00000539739 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
DDB1-216ENST00000539739 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
DDB1-216ENST00000539739 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
DDB1-216ENST00000539739 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
DDB1-216ENST00000539739 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
DDB1-216ENST00000539739 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
DDB1-216ENST00000539739 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
DDB1-216ENST00000539739 APAF1O14727 1248 aa20.34■□□□□ 0.85
DDB1-216ENST00000539739 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
DDB1-216ENST00000539739 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
DDB1-216ENST00000539739 PKD1L3Q7Z443 1732 aa20.32■□□□□ 0.84
DDB1-216ENST00000539739 CYP27B1O15528 508 aa20.31■□□□□ 0.84
DDB1-216ENST00000539739 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
DDB1-216ENST00000539739 PHKG2P15735 406 aa20.31■□□□□ 0.84
DDB1-216ENST00000539739 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
DDB1-216ENST00000539739 RIPK4P57078 832 aa20.31■□□□□ 0.84
DDB1-216ENST00000539739 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
DDB1-216ENST00000539739 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
DDB1-216ENST00000539739 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
DDB1-216ENST00000539739 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
DDB1-216ENST00000539739 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
DDB1-216ENST00000539739 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
DDB1-216ENST00000539739 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
DDB1-216ENST00000539739 RGS12O14924 1447 aa20.29■□□□□ 0.84
DDB1-216ENST00000539739 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
DDB1-216ENST00000539739 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
DDB1-216ENST00000539739 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
DDB1-216ENST00000539739 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.83
DDB1-216ENST00000539739 DCAF5Q96JK2 942 aa20.27■□□□□ 0.83
DDB1-216ENST00000539739 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
DDB1-216ENST00000539739 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
DDB1-216ENST00000539739 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
DDB1-216ENST00000539739 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
DDB1-216ENST00000539739 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
DDB1-216ENST00000539739 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
DDB1-216ENST00000539739 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
DDB1-216ENST00000539739 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDB1-216ENST00000539739 FAM196AQ6ZSG2 479 aa20.22■□□□□ 0.83
DDB1-216ENST00000539739 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
DDB1-216ENST00000539739 FAM182BQ5T319 152 aa20.21■□□□□ 0.83
DDB1-216ENST00000539739 MCM10Q7L590 875 aa20.21■□□□□ 0.83
DDB1-216ENST00000539739 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
DDB1-216ENST00000539739 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
DDB1-216ENST00000539739 TRIM35Q9UPQ4 493 aa20.21■□□□□ 0.83
DDB1-216ENST00000539739 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
DDB1-216ENST00000539739 DCTN1Q14203 1278 aa20.2■□□□□ 0.82
DDB1-216ENST00000539739 BCL9O00512 1426 aa20.2■□□□□ 0.82
DDB1-216ENST00000539739 TEFQ10587 303 aa20.2■□□□□ 0.82
DDB1-216ENST00000539739 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
DDB1-216ENST00000539739 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
DDB1-216ENST00000539739 CABP4P57796 275 aa20.19■□□□□ 0.82
DDB1-216ENST00000539739 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
DDB1-216ENST00000539739 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
DDB1-216ENST00000539739 CEMIPQ8WUJ3 1361 aa20.18■□□□□ 0.82
DDB1-216ENST00000539739 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
DDB1-216ENST00000539739 SYTL4Q96C24 671 aaPredicted RBP20.17■□□□□ 0.82
DDB1-216ENST00000539739 PRIM1P49642 420 aaKnown RBP20.16■□□□□ 0.82
DDB1-216ENST00000539739 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
DDB1-216ENST00000539739 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
DDB1-216ENST00000539739 KAT6BQ8WYB5 2073 aa20.16■□□□□ 0.82
DDB1-216ENST00000539739 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
DDB1-216ENST00000539739 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
DDB1-216ENST00000539739 NFATC2IPQ8NCF5 419 aa20.15■□□□□ 0.82
DDB1-216ENST00000539739 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.82
DDB1-216ENST00000539739 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
DDB1-216ENST00000539739 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
DDB1-216ENST00000539739 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
DDB1-216ENST00000539739 KCNQ2O43526 872 aa20.12■□□□□ 0.81
DDB1-216ENST00000539739 PIGBQ92521 554 aa20.12■□□□□ 0.81
DDB1-216ENST00000539739 BCL11BQ9C0K0 894 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms