RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.33
SPARC-209ENST00000539687 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
SPARC-209ENST00000539687 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
SPARC-209ENST00000539687 IP6K1Q92551 441 aa12.96□□□□□ -0.33
SPARC-209ENST00000539687 SOX12O15370 315 aa12.95□□□□□ -0.34
SPARC-209ENST00000539687 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
SPARC-209ENST00000539687 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
SPARC-209ENST00000539687 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
SPARC-209ENST00000539687 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
SPARC-209ENST00000539687 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
SPARC-209ENST00000539687 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
SPARC-209ENST00000539687 CHL1O00533 1208 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 VAMP4O75379 141 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 EYA1Q99502 592 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 MSH6P52701 1360 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
SPARC-209ENST00000539687 USP19O94966 1318 aa12.93□□□□□ -0.34
SPARC-209ENST00000539687 TRIM27P14373 513 aa12.93□□□□□ -0.34
SPARC-209ENST00000539687 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
SPARC-209ENST00000539687 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
SPARC-209ENST00000539687 LTN1O94822 1766 aa12.93□□□□□ -0.34
SPARC-209ENST00000539687 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
SPARC-209ENST00000539687 TMEM94Q12767 1356 aa12.93□□□□□ -0.34
SPARC-209ENST00000539687 ABCC6O95255 1503 aa12.93□□□□□ -0.34
SPARC-209ENST00000539687 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 CRB1P82279 1406 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 CAPN15O75808 1086 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
SPARC-209ENST00000539687 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
SPARC-209ENST00000539687 RLBP1P12271 317 aa12.9□□□□□ -0.34
SPARC-209ENST00000539687 PDE4AP27815 886 aa12.9□□□□□ -0.34
SPARC-209ENST00000539687 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
SPARC-209ENST00000539687 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
SPARC-209ENST00000539687 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
SPARC-209ENST00000539687 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
SPARC-209ENST00000539687 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
SPARC-209ENST00000539687 PTPRCP08575 1304 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 FOXO3O43524 673 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 GCP02774 474 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 ORAI2Q96SN7 254 aa12.89□□□□□ -0.35
SPARC-209ENST00000539687 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
SPARC-209ENST00000539687 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
SPARC-209ENST00000539687 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
SPARC-209ENST00000539687 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
SPARC-209ENST00000539687 ABCC4O15439 1325 aa12.88□□□□□ -0.35
SPARC-209ENST00000539687 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
SPARC-209ENST00000539687 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
SPARC-209ENST00000539687 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
SPARC-209ENST00000539687 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
SPARC-209ENST00000539687 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
SPARC-209ENST00000539687 MCM10Q7L590 875 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 ZBTB40Q9NUA8 1239 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
SPARC-209ENST00000539687 IGHDP01880 384 aa12.85□□□□□ -0.35
SPARC-209ENST00000539687 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
SPARC-209ENST00000539687 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
SPARC-209ENST00000539687 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
SPARC-209ENST00000539687 DSG3P32926 999 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SPARC-209ENST00000539687 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
SPARC-209ENST00000539687 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
SPARC-209ENST00000539687 HOXB7P09629 217 aa12.83□□□□□ -0.36
SPARC-209ENST00000539687 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
SPARC-209ENST00000539687 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
SPARC-209ENST00000539687 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
SPARC-209ENST00000539687 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
SPARC-209ENST00000539687 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
SPARC-209ENST00000539687 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
SPARC-209ENST00000539687 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
SPARC-209ENST00000539687 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
SPARC-209ENST00000539687 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
SPARC-209ENST00000539687 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
SPARC-209ENST00000539687 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
SPARC-209ENST00000539687 RGS3P49796 1198 aa12.81□□□□□ -0.36
SPARC-209ENST00000539687 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
SPARC-209ENST00000539687 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
SPARC-209ENST00000539687 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
SPARC-209ENST00000539687 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
SPARC-209ENST00000539687 CPDO75976 1380 aa12.81□□□□□ -0.36
SPARC-209ENST00000539687 PXDNQ92626 1479 aa12.8□□□□□ -0.36
SPARC-209ENST00000539687 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
SPARC-209ENST00000539687 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
SPARC-209ENST00000539687 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
SPARC-209ENST00000539687 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms