RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
CD4-209ENST00000539492 SLC16A10Q8TF71 515 aa11.44□□□□□ -0.58
CD4-209ENST00000539492 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
CD4-209ENST00000539492 MEGF6O75095 1541 aa11.44□□□□□ -0.58
CD4-209ENST00000539492 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
CD4-209ENST00000539492 TAF1LQ8IZX4 1826 aa11.43□□□□□ -0.58
CD4-209ENST00000539492 NSD2O96028 1365 aa11.42□□□□□ -0.58
CD4-209ENST00000539492 POLD1P28340 1107 aa11.42□□□□□ -0.58
CD4-209ENST00000539492 ITGB4P16144 1822 aa11.42□□□□□ -0.58
CD4-209ENST00000539492 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
CD4-209ENST00000539492 PNPLA7Q6ZV29 1317 aa11.41□□□□□ -0.58
CD4-209ENST00000539492 C5P01031 1676 aa11.41□□□□□ -0.58
CD4-209ENST00000539492 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
CD4-209ENST00000539492 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
CD4-209ENST00000539492 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
CD4-209ENST00000539492 TFCP2L1Q9NZI6 479 aa11.41□□□□□ -0.58
CD4-209ENST00000539492 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
CD4-209ENST00000539492 FBLN1P23142 703 aa11.4□□□□□ -0.58
CD4-209ENST00000539492 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
CD4-209ENST00000539492 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
CD4-209ENST00000539492 PKD1L3Q7Z443 1732 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 KCNQ4P56696 695 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 TMF1P82094 1093 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 GPR162Q16538 588 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
CD4-209ENST00000539492 USP47Q96K76 1375 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 TOGARAM1Q9Y4F4 1720 aa11.38□□□□□ -0.59
CD4-209ENST00000539492 FYB1O15117 783 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 GGNBP2Q9H3C7 697 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 INSRP06213 1382 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 FLT4P35916 1363 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 ANKRD26Q9UPS8 1709 aa11.37□□□□□ -0.59
CD4-209ENST00000539492 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
CD4-209ENST00000539492 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
CD4-209ENST00000539492 UBR3Q6ZT12 1888 aa11.36□□□□□ -0.59
CD4-209ENST00000539492 TATP17735 454 aaPredicted RBP11.36□□□□□ -0.59
CD4-209ENST00000539492 HMGB2P26583 209 aaKnown RBP11.36□□□□□ -0.59
CD4-209ENST00000539492 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
CD4-209ENST00000539492 CDCA8Q53HL2 280 aa11.35□□□□□ -0.59
CD4-209ENST00000539492 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
CD4-209ENST00000539492 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
CD4-209ENST00000539492 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
CD4-209ENST00000539492 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
CD4-209ENST00000539492 C4BP0C0L5 1744 aa11.34□□□□□ -0.59
CD4-209ENST00000539492 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
CD4-209ENST00000539492 MSH5O43196 834 aa11.33□□□□□ -0.6
CD4-209ENST00000539492 C1QTNF8P60827 252 aa11.33□□□□□ -0.6
CD4-209ENST00000539492 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
CD4-209ENST00000539492 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
CD4-209ENST00000539492 FLAD1Q8NFF5 587 aa11.32□□□□□ -0.6
CD4-209ENST00000539492 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
CD4-209ENST00000539492 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
CD4-209ENST00000539492 CYP27B1O15528 508 aa11.31□□□□□ -0.6
CD4-209ENST00000539492 MSL1Q68DK7 614 aa11.31□□□□□ -0.6
CD4-209ENST00000539492 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
CD4-209ENST00000539492 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
CD4-209ENST00000539492 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
CD4-209ENST00000539492 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
CD4-209ENST00000539492 YBX3P16989 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
CD4-209ENST00000539492 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
CD4-209ENST00000539492 CEP350Q5VT06 3117 aa11.28□□□□□ -0.6
CD4-209ENST00000539492 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
CD4-209ENST00000539492 AK7Q96M32 723 aa11.28□□□□□ -0.6
CD4-209ENST00000539492 CARD14Q9BXL6 1004 aa11.28□□□□□ -0.6
CD4-209ENST00000539492 PIGBQ92521 554 aa11.27□□□□□ -0.61
CD4-209ENST00000539492 SPG7Q9UQ90 795 aa11.27□□□□□ -0.61
CD4-209ENST00000539492 WASHC2AQ641Q2 1341 aa11.27□□□□□ -0.61
CD4-209ENST00000539492 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
CD4-209ENST00000539492 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
CD4-209ENST00000539492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
CD4-209ENST00000539492 PLEKHG2Q9H7P9 1386 aa11.26□□□□□ -0.61
CD4-209ENST00000539492 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
CD4-209ENST00000539492 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 LOC102724428A0A0B4J2F2 783 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 SSFA2P28290 1259 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 SIK1P57059 783 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 EYA1Q99502 592 aa11.25□□□□□ -0.61
CD4-209ENST00000539492 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
CD4-209ENST00000539492 COL5A3P25940 1745 aaPredicted RBP11.24□□□□□ -0.61
CD4-209ENST00000539492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
CD4-209ENST00000539492 PHF14O94880 888 aa11.24□□□□□ -0.61
CD4-209ENST00000539492 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
CD4-209ENST00000539492 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
CD4-209ENST00000539492 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
CD4-209ENST00000539492 TMOD3Q9NYL9 352 aa11.24□□□□□ -0.61
CD4-209ENST00000539492 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
CD4-209ENST00000539492 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
CD4-209ENST00000539492 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
CD4-209ENST00000539492 ADCY9O60503 1353 aa11.23□□□□□ -0.61
CD4-209ENST00000539492 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
CD4-209ENST00000539492 PHKG2P15735 406 aa11.22□□□□□ -0.61
CD4-209ENST00000539492 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
CD4-209ENST00000539492 CICQ96RK0 1608 aaPredicted RBP11.22□□□□□ -0.61
CD4-209ENST00000539492 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms