RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 TMF1P82094 1093 aa15.26■□□□□ 0.03
DDB1-214ENST00000539426 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
DDB1-214ENST00000539426 TRIM26Q12899 539 aaPredicted RBP15.25■□□□□ 0.03
DDB1-214ENST00000539426 NBPF6Q5VWK0 638 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 NBPF4Q96M43 638 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 SYT17Q9BSW7 474 aa15.25■□□□□ 0.03
DDB1-214ENST00000539426 COL24A1Q17RW2 1714 aa15.24■□□□□ 0.03
DDB1-214ENST00000539426 KCNQ4P56696 695 aa15.24■□□□□ 0.03
DDB1-214ENST00000539426 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
DDB1-214ENST00000539426 SYTL4Q96C24 671 aaPredicted RBP15.24■□□□□ 0.03
DDB1-214ENST00000539426 SLC27A3Q5K4L6 730 aa15.23■□□□□ 0.03
DDB1-214ENST00000539426 CHD4Q14839 1912 aa15.23■□□□□ 0.03
DDB1-214ENST00000539426 ARXQ96QS3 562 aa15.22■□□□□ 0.03
DDB1-214ENST00000539426 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
DDB1-214ENST00000539426 HSP90AB2PQ58FF8 381 aa15.21■□□□□ 0.03
DDB1-214ENST00000539426 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
DDB1-214ENST00000539426 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
DDB1-214ENST00000539426 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
DDB1-214ENST00000539426 INSRP06213 1382 aa15.2■□□□□ 0.02
DDB1-214ENST00000539426 FLT4P35916 1363 aa15.2■□□□□ 0.02
DDB1-214ENST00000539426 MAP3K5Q99683 1374 aa15.2■□□□□ 0.02
DDB1-214ENST00000539426 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
DDB1-214ENST00000539426 TOGARAM1Q9Y4F4 1720 aa15.19■□□□□ 0.02
DDB1-214ENST00000539426 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
DDB1-214ENST00000539426 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
DDB1-214ENST00000539426 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
DDB1-214ENST00000539426 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
DDB1-214ENST00000539426 EMILIN1Q9Y6C2 1016 aa15.18■□□□□ 0.02
DDB1-214ENST00000539426 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 MAP2P11137 1827 aaKnown RBP15.17■□□□□ 0.02
DDB1-214ENST00000539426 ITGB4P16144 1822 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 C5P01031 1676 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 SLC16A10Q8TF71 515 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 TAF1LQ8IZX4 1826 aa15.17■□□□□ 0.02
DDB1-214ENST00000539426 TATP17735 454 aaPredicted RBP15.16■□□□□ 0.02
DDB1-214ENST00000539426 CYP27B1O15528 508 aa15.15■□□□□ 0.02
DDB1-214ENST00000539426 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
DDB1-214ENST00000539426 NCAPD2Q15021 1401 aa15.15■□□□□ 0.02
DDB1-214ENST00000539426 PCDH11XQ9BZA7 1347 aa15.15■□□□□ 0.02
DDB1-214ENST00000539426 PCDH11YQ9BZA8 1340 aa15.15■□□□□ 0.02
DDB1-214ENST00000539426 POLD1P28340 1107 aa15.14■□□□□ 0.01
DDB1-214ENST00000539426 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
DDB1-214ENST00000539426 COL23A1Q86Y22 540 aaPredicted RBP15.13■□□□□ 0.01
DDB1-214ENST00000539426 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
DDB1-214ENST00000539426 PPM1GO15355 546 aaPredicted RBP15.11■□□□□ 0.01
DDB1-214ENST00000539426 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
DDB1-214ENST00000539426 C4BP0C0L5 1744 aa15.1■□□□□ 0.01
DDB1-214ENST00000539426 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
DDB1-214ENST00000539426 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
DDB1-214ENST00000539426 TIMELESSQ9UNS1 1208 aa15.1■□□□□ 0.01
DDB1-214ENST00000539426 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
DDB1-214ENST00000539426 MSH5O43196 834 aa15.09■□□□□ 0.01
DDB1-214ENST00000539426 GPR162Q16538 588 aa15.09■□□□□ 0.01
DDB1-214ENST00000539426 EYA1Q99502 592 aa15.09■□□□□ 0.01
DDB1-214ENST00000539426 WASHC2AQ641Q2 1341 aa15.09■□□□□ 0.01
DDB1-214ENST00000539426 POLKQ9UBT6 870 aa15.08■□□□□ 0
DDB1-214ENST00000539426 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
DDB1-214ENST00000539426 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
DDB1-214ENST00000539426 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
DDB1-214ENST00000539426 PIGBQ92521 554 aa15.07■□□□□ 0
DDB1-214ENST00000539426 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
DDB1-214ENST00000539426 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
DDB1-214ENST00000539426 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
DDB1-214ENST00000539426 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -04e-9■■■□□ 14.8
DDB1-214ENST00000539426 SMIM5Q71RC9 77 aa15.05■□□□□ -0
DDB1-214ENST00000539426 SPG7Q9UQ90 795 aa15.05■□□□□ -0
DDB1-214ENST00000539426 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
DDB1-214ENST00000539426 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
DDB1-214ENST00000539426 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
DDB1-214ENST00000539426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -0
DDB1-214ENST00000539426 HSPA5P11021 654 aaKnown RBP15.02■□□□□ -0
DDB1-214ENST00000539426 PHKG2P15735 406 aa15.02■□□□□ -0
DDB1-214ENST00000539426 LINC00116Q8NCU8 138 aa15.02■□□□□ -0
DDB1-214ENST00000539426 FLAD1Q8NFF5 587 aa15.02■□□□□ -0
DDB1-214ENST00000539426 AK7Q96M32 723 aa15.02■□□□□ -0
DDB1-214ENST00000539426 LOC102724428A0A0B4J2F2 783 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 PHF14O94880 888 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 SIK1P57059 783 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
DDB1-214ENST00000539426 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
DDB1-214ENST00000539426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
DDB1-214ENST00000539426 ITPK1Q13572 414 aa15□□□□□ -0.01
DDB1-214ENST00000539426 PANK3Q9H999 370 aa15□□□□□ -0.01
DDB1-214ENST00000539426 HMGB2P26583 209 aaKnown RBP14.99□□□□□ -0.01
DDB1-214ENST00000539426 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
DDB1-214ENST00000539426 CD2APQ9Y5K6 639 aa14.99□□□□□ -0.01
DDB1-214ENST00000539426 C1QTNF8P60827 252 aa14.98□□□□□ -0.01
DDB1-214ENST00000539426 ATG3Q9NT62 314 aa14.98□□□□□ -0.01
DDB1-214ENST00000539426 KDRP35968 1356 aa14.98□□□□□ -0.01
DDB1-214ENST00000539426 PLEKHG2Q9H7P9 1386 aa14.98□□□□□ -0.01
DDB1-214ENST00000539426 GRIN3BO60391 1043 aa14.97□□□□□ -0.01
DDB1-214ENST00000539426 SSFA2P28290 1259 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms