RNA–Protein interactions for RNA: ENST00000539408.5

GABARAPL1-207, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-207ENST00000539408 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
GABARAPL1-207ENST00000539408 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
GABARAPL1-207ENST00000539408 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
GABARAPL1-207ENST00000539408 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
GABARAPL1-207ENST00000539408 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
GABARAPL1-207ENST00000539408 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
GABARAPL1-207ENST00000539408 IFFO2Q5TF58 517 aa17.27■□□□□ 0.36
GABARAPL1-207ENST00000539408 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
GABARAPL1-207ENST00000539408 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
GABARAPL1-207ENST00000539408 COL24A1Q17RW2 1714 aa17.25■□□□□ 0.35
GABARAPL1-207ENST00000539408 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
GABARAPL1-207ENST00000539408 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
GABARAPL1-207ENST00000539408 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
GABARAPL1-207ENST00000539408 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
GABARAPL1-207ENST00000539408 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
GABARAPL1-207ENST00000539408 LTN1O94822 1766 aa17.23■□□□□ 0.35
GABARAPL1-207ENST00000539408 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
GABARAPL1-207ENST00000539408 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
GABARAPL1-207ENST00000539408 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
GABARAPL1-207ENST00000539408 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
GABARAPL1-207ENST00000539408 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
GABARAPL1-207ENST00000539408 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
GABARAPL1-207ENST00000539408 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
GABARAPL1-207ENST00000539408 COG3Q96JB2 828 aa17.21■□□□□ 0.35
GABARAPL1-207ENST00000539408 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
GABARAPL1-207ENST00000539408 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
GABARAPL1-207ENST00000539408 USP47Q96K76 1375 aa17.2■□□□□ 0.34
GABARAPL1-207ENST00000539408 AMPHP49418 695 aa17.2■□□□□ 0.34
GABARAPL1-207ENST00000539408 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
GABARAPL1-207ENST00000539408 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
GABARAPL1-207ENST00000539408 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
GABARAPL1-207ENST00000539408 ABCB7O75027 752 aa17.18■□□□□ 0.34
GABARAPL1-207ENST00000539408 HOXC9P31274 260 aa17.18■□□□□ 0.34
GABARAPL1-207ENST00000539408 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
GABARAPL1-207ENST00000539408 NSD2O96028 1365 aa17.17■□□□□ 0.34
GABARAPL1-207ENST00000539408 LY75O60449 1722 aa17.17■□□□□ 0.34
GABARAPL1-207ENST00000539408 YBX3P16989 372 aaKnown RBP eCLIP17.17■□□□□ 0.34
GABARAPL1-207ENST00000539408 KCNQ4P56696 695 aa17.17■□□□□ 0.34
GABARAPL1-207ENST00000539408 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
GABARAPL1-207ENST00000539408 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
GABARAPL1-207ENST00000539408 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
GABARAPL1-207ENST00000539408 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
GABARAPL1-207ENST00000539408 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
GABARAPL1-207ENST00000539408 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
GABARAPL1-207ENST00000539408 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
GABARAPL1-207ENST00000539408 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
GABARAPL1-207ENST00000539408 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
GABARAPL1-207ENST00000539408 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 HSPA6P17066 643 aa17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
GABARAPL1-207ENST00000539408 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
GABARAPL1-207ENST00000539408 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
GABARAPL1-207ENST00000539408 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
GABARAPL1-207ENST00000539408 MEGF6O75095 1541 aa17.1■□□□□ 0.33
GABARAPL1-207ENST00000539408 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
GABARAPL1-207ENST00000539408 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
GABARAPL1-207ENST00000539408 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
GABARAPL1-207ENST00000539408 ADCY9O60503 1353 aa17.07■□□□□ 0.32
GABARAPL1-207ENST00000539408 AK7Q96M32 723 aa17.07■□□□□ 0.32
GABARAPL1-207ENST00000539408 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
GABARAPL1-207ENST00000539408 TESK2Q96S53 571 aa17.06■□□□□ 0.32
GABARAPL1-207ENST00000539408 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
GABARAPL1-207ENST00000539408 INSRP06213 1382 aa17.05■□□□□ 0.32
GABARAPL1-207ENST00000539408 FYB1O15117 783 aa17.05■□□□□ 0.32
GABARAPL1-207ENST00000539408 SSFA2P28290 1259 aa17.05■□□□□ 0.32
GABARAPL1-207ENST00000539408 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
GABARAPL1-207ENST00000539408 FBLN1P23142 703 aa17.04■□□□□ 0.32
GABARAPL1-207ENST00000539408 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
GABARAPL1-207ENST00000539408 C5P01031 1676 aa17.04■□□□□ 0.32
GABARAPL1-207ENST00000539408 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
GABARAPL1-207ENST00000539408 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
GABARAPL1-207ENST00000539408 NKX1-1Q15270 411 aaPredicted RBP17.02■□□□□ 0.32
GABARAPL1-207ENST00000539408 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
GABARAPL1-207ENST00000539408 FLT4P35916 1363 aa17.02■□□□□ 0.31
GABARAPL1-207ENST00000539408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
GABARAPL1-207ENST00000539408 CYP27B1O15528 508 aa17.01■□□□□ 0.31
GABARAPL1-207ENST00000539408 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
GABARAPL1-207ENST00000539408 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
GABARAPL1-207ENST00000539408 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
GABARAPL1-207ENST00000539408 TMF1P82094 1093 aa17■□□□□ 0.31
GABARAPL1-207ENST00000539408 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
GABARAPL1-207ENST00000539408 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
GABARAPL1-207ENST00000539408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
GABARAPL1-207ENST00000539408 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
GABARAPL1-207ENST00000539408 C4BP0C0L5 1744 aa16.99■□□□□ 0.31
GABARAPL1-207ENST00000539408 APLP1P51693 650 aa16.99■□□□□ 0.31
GABARAPL1-207ENST00000539408 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
GABARAPL1-207ENST00000539408 SIK1P57059 783 aa16.98■□□□□ 0.31
GABARAPL1-207ENST00000539408 TGFB2P61812 414 aa16.98■□□□□ 0.31
GABARAPL1-207ENST00000539408 PIGBQ92521 554 aa16.98■□□□□ 0.31
GABARAPL1-207ENST00000539408 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
GABARAPL1-207ENST00000539408 KIF3CO14782 793 aa16.97■□□□□ 0.31
GABARAPL1-207ENST00000539408 PHF14O94880 888 aa16.97■□□□□ 0.31
GABARAPL1-207ENST00000539408 TOMM70O94826 608 aa16.96■□□□□ 0.31
GABARAPL1-207ENST00000539408 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
GABARAPL1-207ENST00000539408 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms