RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 NSD3Q9BZ95 1437 aa24.11■■□□□ 1.45
PDCD2-207ENST00000539212 KCNQ4P56696 695 aa24.11■■□□□ 1.45
PDCD2-207ENST00000539212 SYTL4Q96C24 671 aaPredicted RBP24.11■■□□□ 1.45
PDCD2-207ENST00000539212 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
PDCD2-207ENST00000539212 MTFR1LQ9H019 292 aa24.1■■□□□ 1.45
PDCD2-207ENST00000539212 YY1P25490 414 aa24.09■■□□□ 1.45
PDCD2-207ENST00000539212 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
PDCD2-207ENST00000539212 ZCRB1Q8TBF4 217 aaKnown RBP24.09■■□□□ 1.45
PDCD2-207ENST00000539212 CARD14Q9BXL6 1004 aa24.09■■□□□ 1.45
PDCD2-207ENST00000539212 UTRNP46939 3433 aa24.09■■□□□ 1.45
PDCD2-207ENST00000539212 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
PDCD2-207ENST00000539212 SMG6Q86US8 1419 aaKnown RBP24.09■■□□□ 1.45
PDCD2-207ENST00000539212 HSP90AB2PQ58FF8 381 aa24.08■■□□□ 1.45
PDCD2-207ENST00000539212 SGIP1Q9BQI5 828 aa24.08■■□□□ 1.45
PDCD2-207ENST00000539212 COL24A1Q17RW2 1714 aa24.07■■□□□ 1.44
PDCD2-207ENST00000539212 FHDC1Q9C0D6 1143 aaPredicted RBP24.07■■□□□ 1.44
PDCD2-207ENST00000539212 MAP2P11137 1827 aaKnown RBP24.07■■□□□ 1.44
PDCD2-207ENST00000539212 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
PDCD2-207ENST00000539212 PKD1L3Q7Z443 1732 aa24.06■■□□□ 1.44
PDCD2-207ENST00000539212 ITGB4P16144 1822 aa24.05■■□□□ 1.44
PDCD2-207ENST00000539212 INSRP06213 1382 aa24.05■■□□□ 1.44
PDCD2-207ENST00000539212 FLT4P35916 1363 aa24.05■■□□□ 1.44
PDCD2-207ENST00000539212 CDCA8Q53HL2 280 aa24.05■■□□□ 1.44
PDCD2-207ENST00000539212 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
PDCD2-207ENST00000539212 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
PDCD2-207ENST00000539212 C5P01031 1676 aa24.04■■□□□ 1.44
PDCD2-207ENST00000539212 SLC27A3Q5K4L6 730 aa24.02■■□□□ 1.44
PDCD2-207ENST00000539212 SYT17Q9BSW7 474 aa24.02■■□□□ 1.44
PDCD2-207ENST00000539212 TAF1LQ8IZX4 1826 aa24.02■■□□□ 1.44
PDCD2-207ENST00000539212 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
PDCD2-207ENST00000539212 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
PDCD2-207ENST00000539212 RAPGEF4Q8WZA2 1011 aa24.01■■□□□ 1.43
PDCD2-207ENST00000539212 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
PDCD2-207ENST00000539212 ARXQ96QS3 562 aa23.99■■□□□ 1.43
PDCD2-207ENST00000539212 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
PDCD2-207ENST00000539212 KIF24Q5T7B8 1368 aa23.98■■□□□ 1.43
PDCD2-207ENST00000539212 CHD4Q14839 1912 aa23.98■■□□□ 1.43
PDCD2-207ENST00000539212 CGNL1Q0VF96 1302 aa23.97■■□□□ 1.43
PDCD2-207ENST00000539212 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
PDCD2-207ENST00000539212 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
PDCD2-207ENST00000539212 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
PDCD2-207ENST00000539212 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
PDCD2-207ENST00000539212 TFCP2L1Q9NZI6 479 aa23.96■■□□□ 1.43
PDCD2-207ENST00000539212 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
PDCD2-207ENST00000539212 NCAPD2Q15021 1401 aa23.94■■□□□ 1.42
PDCD2-207ENST00000539212 CYP27B1O15528 508 aa23.94■■□□□ 1.42
PDCD2-207ENST00000539212 KLHL34Q8N239 644 aa23.93■■□□□ 1.42
PDCD2-207ENST00000539212 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
PDCD2-207ENST00000539212 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
PDCD2-207ENST00000539212 GOLGB1Q14789 3259 aaKnown RBP23.91■■□□□ 1.42
PDCD2-207ENST00000539212 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
PDCD2-207ENST00000539212 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
PDCD2-207ENST00000539212 PALLDQ8WX93 1383 aa23.9■■□□□ 1.42
PDCD2-207ENST00000539212 SLC16A10Q8TF71 515 aa23.89■■□□□ 1.41
PDCD2-207ENST00000539212 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
PDCD2-207ENST00000539212 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
PDCD2-207ENST00000539212 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
PDCD2-207ENST00000539212 POLD1P28340 1107 aa23.87■■□□□ 1.41
PDCD2-207ENST00000539212 COL23A1Q86Y22 540 aaPredicted RBP23.87■■□□□ 1.41
PDCD2-207ENST00000539212 EYA1Q99502 592 aa23.87■■□□□ 1.41
PDCD2-207ENST00000539212 POLKQ9UBT6 870 aa23.87■■□□□ 1.41
PDCD2-207ENST00000539212 MSH5O43196 834 aa23.86■■□□□ 1.41
PDCD2-207ENST00000539212 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
PDCD2-207ENST00000539212 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
PDCD2-207ENST00000539212 NLGN2Q8NFZ4 835 aa23.85■■□□□ 1.41
PDCD2-207ENST00000539212 PIGBQ92521 554 aa23.82■■□□□ 1.4
PDCD2-207ENST00000539212 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDCD2-207ENST00000539212 EIF4A2Q14240 407 aaKnown RBP23.81■■□□□ 1.4
PDCD2-207ENST00000539212 SMIM5Q71RC9 77 aa23.81■■□□□ 1.4
PDCD2-207ENST00000539212 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
PDCD2-207ENST00000539212 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
PDCD2-207ENST00000539212 ZNF784Q8NCA9 323 aaPredicted RBP23.81■■□□□ 1.4
PDCD2-207ENST00000539212 GPR162Q16538 588 aa23.8■■□□□ 1.4
PDCD2-207ENST00000539212 SPG7Q9UQ90 795 aa23.8■■□□□ 1.4
PDCD2-207ENST00000539212 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
PDCD2-207ENST00000539212 PANK3Q9H999 370 aa23.79■■□□□ 1.4
PDCD2-207ENST00000539212 PHKG2P15735 406 aa23.77■■□□□ 1.4
PDCD2-207ENST00000539212 CCER1Q8TC90 406 aaPredicted RBP23.77■■□□□ 1.4
PDCD2-207ENST00000539212 SMARCC1Q92922 1105 aaPredicted RBP23.76■■□□□ 1.39
PDCD2-207ENST00000539212 PHF14O94880 888 aa23.75■■□□□ 1.39
PDCD2-207ENST00000539212 AK7Q96M32 723 aa23.75■■□□□ 1.39
PDCD2-207ENST00000539212 LINC00116Q8NCU8 138 aa23.74■■□□□ 1.39
PDCD2-207ENST00000539212 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
PDCD2-207ENST00000539212 ASAP1Q9ULH1 1129 aa23.74■■□□□ 1.39
PDCD2-207ENST00000539212 IGSF1Q8N6C5 1336 aa23.74■■□□□ 1.39
PDCD2-207ENST00000539212 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
PDCD2-207ENST00000539212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.73■■□□□ 1.39
PDCD2-207ENST00000539212 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
PDCD2-207ENST00000539212 YBX3P16989 372 aaKnown RBP eCLIP23.72■■□□□ 1.39
PDCD2-207ENST00000539212 SIK1P57059 783 aa23.72■■□□□ 1.39
PDCD2-207ENST00000539212 COL5A3P25940 1745 aaPredicted RBP23.72■■□□□ 1.39
PDCD2-207ENST00000539212 ITPK1Q13572 414 aa23.71■■□□□ 1.39
PDCD2-207ENST00000539212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.69■■□□□ 1.38
PDCD2-207ENST00000539212 FLAD1Q8NFF5 587 aa23.69■■□□□ 1.38
PDCD2-207ENST00000539212 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
PDCD2-207ENST00000539212 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
PDCD2-207ENST00000539212 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
PDCD2-207ENST00000539212 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
PDCD2-207ENST00000539212 KDRP35968 1356 aa23.67■■□□□ 1.38
PDCD2-207ENST00000539212 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms