RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
CCDC7-209ENST00000539197 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
CCDC7-209ENST00000539197 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
CCDC7-209ENST00000539197 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
CCDC7-209ENST00000539197 SOCS7O14512 581 aa12.53□□□□□ -0.4
CCDC7-209ENST00000539197 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
CCDC7-209ENST00000539197 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
CCDC7-209ENST00000539197 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
CCDC7-209ENST00000539197 MEN1O00255 615 aa12.52□□□□□ -0.41
CCDC7-209ENST00000539197 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
CCDC7-209ENST00000539197 A0A1W2PRU2 124 aa12.51□□□□□ -0.41
CCDC7-209ENST00000539197 APBB1O00213 710 aa12.51□□□□□ -0.41
CCDC7-209ENST00000539197 PCDHB11Q9Y5F2 797 aa12.51□□□□□ -0.41
CCDC7-209ENST00000539197 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
CCDC7-209ENST00000539197 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CCDC7-209ENST00000539197 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
CCDC7-209ENST00000539197 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
CCDC7-209ENST00000539197 WHAMMQ8TF30 809 aa12.47□□□□□ -0.41
CCDC7-209ENST00000539197 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
CCDC7-209ENST00000539197 GPC1P35052 558 aa12.45□□□□□ -0.42
CCDC7-209ENST00000539197 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
CCDC7-209ENST00000539197 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
CCDC7-209ENST00000539197 TRAK2O60296 914 aa12.44□□□□□ -0.42
CCDC7-209ENST00000539197 POU4F2Q12837 409 aa12.44□□□□□ -0.42
CCDC7-209ENST00000539197 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
CCDC7-209ENST00000539197 ZNF385CQ66K41 422 aaPredicted RBP12.44□□□□□ -0.42
CCDC7-209ENST00000539197 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
CCDC7-209ENST00000539197 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
CCDC7-209ENST00000539197 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
CCDC7-209ENST00000539197 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
CCDC7-209ENST00000539197 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
CCDC7-209ENST00000539197 IRF5Q13568 498 aa12.42□□□□□ -0.42
CCDC7-209ENST00000539197 GAS6Q14393 721 aa12.42□□□□□ -0.42
CCDC7-209ENST00000539197 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
CCDC7-209ENST00000539197 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
CCDC7-209ENST00000539197 GPR25O00155 361 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 GSK3AP49840 483 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 CLN3Q13286 438 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 SLC27A3Q5K4L6 730 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
CCDC7-209ENST00000539197 KCNMA1Q12791 1236 aa12.39□□□□□ -0.43
CCDC7-209ENST00000539197 DBN1Q16643 649 aa12.39□□□□□ -0.43
CCDC7-209ENST00000539197 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
CCDC7-209ENST00000539197 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
CCDC7-209ENST00000539197 ZNF837Q96EG3 531 aaPredicted RBP12.38□□□□□ -0.43
CCDC7-209ENST00000539197 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
CCDC7-209ENST00000539197 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
CCDC7-209ENST00000539197 IL2RAP01589 272 aa12.37□□□□□ -0.43
CCDC7-209ENST00000539197 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
CCDC7-209ENST00000539197 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
CCDC7-209ENST00000539197 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
CCDC7-209ENST00000539197 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
CCDC7-209ENST00000539197 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
CCDC7-209ENST00000539197 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
CCDC7-209ENST00000539197 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
CCDC7-209ENST00000539197 DYRK1BQ9Y463 629 aa12.36□□□□□ -0.43
CCDC7-209ENST00000539197 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
CCDC7-209ENST00000539197 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
CCDC7-209ENST00000539197 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
CCDC7-209ENST00000539197 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
CCDC7-209ENST00000539197 SRSF11Q05519 484 aaKnown RBP12.34□□□□□ -0.43
CCDC7-209ENST00000539197 LYPD4Q6UWN0 246 aa12.34□□□□□ -0.43
CCDC7-209ENST00000539197 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
CCDC7-209ENST00000539197 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
CCDC7-209ENST00000539197 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
CCDC7-209ENST00000539197 H7C1W4 665 aa12.32□□□□□ -0.44
CCDC7-209ENST00000539197 GNRH1P01148 92 aa12.32□□□□□ -0.44
CCDC7-209ENST00000539197 CENPCQ03188 943 aa12.32□□□□□ -0.44
CCDC7-209ENST00000539197 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
CCDC7-209ENST00000539197 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
CCDC7-209ENST00000539197 ABL2P42684 1182 aa12.31□□□□□ -0.44
CCDC7-209ENST00000539197 PHKA2P46019 1235 aa12.31□□□□□ -0.44
CCDC7-209ENST00000539197 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC7-209ENST00000539197 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
CCDC7-209ENST00000539197 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
CCDC7-209ENST00000539197 TAS1R3Q7RTX0 852 aa12.3□□□□□ -0.44
CCDC7-209ENST00000539197 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
CCDC7-209ENST00000539197 HRH3Q9Y5N1 445 aa12.3□□□□□ -0.44
CCDC7-209ENST00000539197 THBS1P07996 1170 aa12.29□□□□□ -0.44
CCDC7-209ENST00000539197 MAP3K10Q02779 954 aa12.29□□□□□ -0.44
CCDC7-209ENST00000539197 TMEM151AQ8N4L1 468 aa12.29□□□□□ -0.44
CCDC7-209ENST00000539197 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
CCDC7-209ENST00000539197 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
CCDC7-209ENST00000539197 RASSF7Q02833 373 aa12.28□□□□□ -0.44
CCDC7-209ENST00000539197 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
CCDC7-209ENST00000539197 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
CCDC7-209ENST00000539197 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 RNF135Q8IUD6 432 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 TRERF1Q96PN7 1200 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
CCDC7-209ENST00000539197 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
CCDC7-209ENST00000539197 GDF11O95390 407 aa12.26□□□□□ -0.45
CCDC7-209ENST00000539197 F11P03951 625 aa12.26□□□□□ -0.45
CCDC7-209ENST00000539197 CELA2BP08218 269 aaPredicted RBP12.26□□□□□ -0.45
CCDC7-209ENST00000539197 ETNK1Q9HBU6 452 aa12.26□□□□□ -0.45
CCDC7-209ENST00000539197 MCM6Q14566 821 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms