RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 MCM10Q7L590 875 aa32.86■■■□□ 2.85
KLHL42-202ENST00000539176 LAS1LQ9Y4W2 734 aaKnown RBP32.86■■■□□ 2.85
KLHL42-202ENST00000539176 FANCIQ9NVI1 1328 aa32.85■■■□□ 2.85
KLHL42-202ENST00000539176 GAS2L2Q8NHY3 880 aa32.85■■■□□ 2.85
KLHL42-202ENST00000539176 FAM208AQ9UK61 1670 aaKnown RBP32.84■■■□□ 2.85
KLHL42-202ENST00000539176 COL5A2P05997 1499 aaPredicted RBP32.8■■■□□ 2.84
KLHL42-202ENST00000539176 CT47B1P0C2W7 299 aaPredicted RBP32.78■■■□□ 2.84
KLHL42-202ENST00000539176 C20orf194Q5TEA3 1177 aa32.78■■■□□ 2.84
KLHL42-202ENST00000539176 CALD1Q05682 793 aaKnown RBP32.78■■■□□ 2.84
KLHL42-202ENST00000539176 STRN4Q9NRL3 753 aa32.78■■■□□ 2.84
KLHL42-202ENST00000539176 EXOSC9Q06265 439 aaKnown RBP32.76■■■□□ 2.84
KLHL42-202ENST00000539176 RTF1Q92541 710 aaKnown RBP32.76■■■□□ 2.84
KLHL42-202ENST00000539176 MAP3K5Q99683 1374 aa32.76■■■□□ 2.83
KLHL42-202ENST00000539176 WDR17Q8IZU2 1322 aa32.76■■■□□ 2.83
KLHL42-202ENST00000539176 GNAT3A8MTJ3 354 aa32.75■■■□□ 2.83
KLHL42-202ENST00000539176 IFT57Q9NWB7 429 aa32.75■■■□□ 2.83
KLHL42-202ENST00000539176 ZNF853P0CG23 659 aa32.74■■■□□ 2.83
KLHL42-202ENST00000539176 PDE3AQ14432 1141 aa32.74■■■□□ 2.83
KLHL42-202ENST00000539176 MEGF6O75095 1541 aa32.74■■■□□ 2.83
KLHL42-202ENST00000539176 GNAI1P63096 354 aa32.74■■■□□ 2.83
KLHL42-202ENST00000539176 PLEKHO1Q53GL0 409 aaPredicted RBP32.74■■■□□ 2.83
KLHL42-202ENST00000539176 TOM1L2Q6ZVM7 507 aa32.74■■■□□ 2.83
KLHL42-202ENST00000539176 NUTM2BA6NNL0 878 aaPredicted RBP32.73■■■□□ 2.83
KLHL42-202ENST00000539176 NUTM2EB1AL46 878 aaPredicted RBP32.73■■■□□ 2.83
KLHL42-202ENST00000539176 ZNF530Q6P9A1 599 aaPredicted RBP32.73■■■□□ 2.83
KLHL42-202ENST00000539176 NUTM2AQ8IVF1 878 aaPredicted RBP32.73■■■□□ 2.83
KLHL42-202ENST00000539176 MBIPQ9NS73 344 aa32.73■■■□□ 2.83
KLHL42-202ENST00000539176 COL14A1Q05707 1796 aaKnown RBP32.73■■■□□ 2.83
KLHL42-202ENST00000539176 ADAMTS2O95450 1211 aa32.72■■■□□ 2.83
KLHL42-202ENST00000539176 RAPGEF4Q8WZA2 1011 aa32.72■■■□□ 2.83
KLHL42-202ENST00000539176 BTG4Q9NY30 223 aa32.72■■■□□ 2.83
KLHL42-202ENST00000539176 CRB1P82279 1406 aa32.72■■■□□ 2.83
KLHL42-202ENST00000539176 BCAR3O75815 825 aa32.71■■■□□ 2.83
KLHL42-202ENST00000539176 EVA1CP58658 441 aa32.71■■■□□ 2.83
KLHL42-202ENST00000539176 LARP1Q6PKG0 1096 aaKnown RBP32.71■■■□□ 2.83
KLHL42-202ENST00000539176 CFAP44Q96MT7 982 aa32.71■■■□□ 2.83
KLHL42-202ENST00000539176 RARSP54136 660 aaKnown RBP32.69■■■□□ 2.82
KLHL42-202ENST00000539176 IL17REQ8NFR9 667 aa32.69■■■□□ 2.82
KLHL42-202ENST00000539176 TATP17735 454 aaPredicted RBP32.69■■■□□ 2.82
KLHL42-202ENST00000539176 AMOTQ4VCS5 1084 aa32.69■■■□□ 2.82
KLHL42-202ENST00000539176 LRRC37A3O60309 1634 aa32.68■■■□□ 2.82
KLHL42-202ENST00000539176 HTATSF1O43719 755 aaKnown RBP32.68■■■□□ 2.82
KLHL42-202ENST00000539176 MIS18AQ9NYP9 233 aa32.66■■■□□ 2.82
KLHL42-202ENST00000539176 CANXP27824 592 aaKnown RBP32.64■■■□□ 2.82
KLHL42-202ENST00000539176 AKAP4Q5JQC9 854 aa32.64■■■□□ 2.82
KLHL42-202ENST00000539176 BCL2L13Q9BXK5 485 aa32.64■■■□□ 2.82
KLHL42-202ENST00000539176 LGR6Q9HBX8 967 aa32.64■■■□□ 2.82
KLHL42-202ENST00000539176 PLCH1Q4KWH8 1693 aa32.64■■■□□ 2.81
KLHL42-202ENST00000539176 CHL1O00533 1208 aa32.63■■■□□ 2.81
KLHL42-202ENST00000539176 TCERG1O14776 1098 aaKnown RBP32.63■■■□□ 2.81
KLHL42-202ENST00000539176 VIRMAQ69YN4 1812 aaKnown RBP32.63■■■□□ 2.81
KLHL42-202ENST00000539176 AAMPQ13685 434 aa32.63■■■□□ 2.81
KLHL42-202ENST00000539176 C1orf141Q5JVX7 400 aa32.63■■■□□ 2.81
KLHL42-202ENST00000539176 CARD10Q9BWT7 1032 aa32.63■■■□□ 2.81
KLHL42-202ENST00000539176 MPRIPQ6WCQ1 1025 aa32.62■■■□□ 2.81
KLHL42-202ENST00000539176 CENPQQ7L2Z9 268 aaPredicted RBP32.62■■■□□ 2.81
KLHL42-202ENST00000539176 TSPYL6Q8N831 410 aa32.61■■■□□ 2.81
KLHL42-202ENST00000539176 USP35Q9P2H5 1018 aa32.61■■■□□ 2.81
KLHL42-202ENST00000539176 KDM2BQ8NHM5 1336 aa32.61■■■□□ 2.81
KLHL42-202ENST00000539176 ELL2O00472 640 aaPredicted RBP32.6■■■□□ 2.81
KLHL42-202ENST00000539176 PKD1L3Q7Z443 1732 aa32.59■■■□□ 2.81
KLHL42-202ENST00000539176 JCADQ9P266 1359 aa32.59■■■□□ 2.81
KLHL42-202ENST00000539176 C8orf58Q8NAV2 365 aa32.59■■■□□ 2.81
KLHL42-202ENST00000539176 CEMIPQ8WUJ3 1361 aa32.58■■■□□ 2.81
KLHL42-202ENST00000539176 PARP4Q9UKK3 1724 aaKnown RBP32.58■■■□□ 2.81
KLHL42-202ENST00000539176 KRT24Q2M2I5 525 aa32.58■■■□□ 2.81
KLHL42-202ENST00000539176 SPG7Q9UQ90 795 aa32.58■■■□□ 2.81
KLHL42-202ENST00000539176 OVOS2A0A0G2JMS6 1433 aa32.57■■■□□ 2.81
KLHL42-202ENST00000539176 MS4A1P11836 297 aa32.57■■■□□ 2.8
KLHL42-202ENST00000539176 TSPYL4Q9UJ04 414 aa32.57■■■□□ 2.8
KLHL42-202ENST00000539176 HSPA1LP34931 641 aa32.56■■■□□ 2.8
KLHL42-202ENST00000539176 RNMTO43148 476 aaKnown RBP32.55■■■□□ 2.8
KLHL42-202ENST00000539176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.54■■■□□ 2.8
KLHL42-202ENST00000539176 NRAPQ86VF7 1730 aa32.53■■■□□ 2.8
KLHL42-202ENST00000539176 VAMP4O75379 141 aa32.53■■■□□ 2.8
KLHL42-202ENST00000539176 IL2RBP14784 551 aa32.53■■■□□ 2.8
KLHL42-202ENST00000539176 PHKG2P15735 406 aa32.53■■■□□ 2.8
KLHL42-202ENST00000539176 SSH1Q8WYL5 1049 aa32.53■■■□□ 2.8
KLHL42-202ENST00000539176 CYP27B1O15528 508 aa32.52■■■□□ 2.8
KLHL42-202ENST00000539176 TAF7Q15545 349 aaPredicted RBP32.52■■■□□ 2.8
KLHL42-202ENST00000539176 TWISTNBQ3B726 338 aaPredicted RBP32.52■■■□□ 2.8
KLHL42-202ENST00000539176 FRAT1Q92837 279 aaPredicted RBP32.52■■■□□ 2.8
KLHL42-202ENST00000539176 SMC4Q9NTJ3 1288 aa32.51■■■□□ 2.79
KLHL42-202ENST00000539176 ZNF428Q96B54 188 aa32.5■■■□□ 2.79
KLHL42-202ENST00000539176 ADAMTS7Q9UKP4 1686 aa32.49■■■□□ 2.79
KLHL42-202ENST00000539176 KDM6AO15550 1401 aaPredicted RBP32.49■■■□□ 2.79
KLHL42-202ENST00000539176 TEFQ10587 303 aa32.48■■■□□ 2.79
KLHL42-202ENST00000539176 IFNL2Q8IZJ0 200 aa32.48■■■□□ 2.79
KLHL42-202ENST00000539176 ZCRB1Q8TBF4 217 aaKnown RBP32.48■■■□□ 2.79
KLHL42-202ENST00000539176 SCN11AQ9UI33 1791 aa32.48■■■□□ 2.79
KLHL42-202ENST00000539176 PLEKHG2Q9H7P9 1386 aa32.48■■■□□ 2.79
KLHL42-202ENST00000539176 SHANK3Q9BYB0 1731 aa32.47■■■□□ 2.79
KLHL42-202ENST00000539176 LRP6O75581 1613 aa32.47■■■□□ 2.79
KLHL42-202ENST00000539176 CLUAP1Q96AJ1 413 aa32.46■■■□□ 2.79
KLHL42-202ENST00000539176 TNNQ9UQP3 1299 aa32.46■■■□□ 2.79
KLHL42-202ENST00000539176 SLIT2O94813 1529 aa32.45■■■□□ 2.79
KLHL42-202ENST00000539176 ZKSCAN2Q63HK3 967 aa32.45■■■□□ 2.79
KLHL42-202ENST00000539176 PANK1Q8TE04 598 aa32.45■■■□□ 2.79
KLHL42-202ENST00000539176 C8orf37Q96NL8 207 aa32.45■■■□□ 2.79
KLHL42-202ENST00000539176 NWD2Q9ULI1 1742 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms