RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 RNF217Q8TC41 542 aa10.11□□□□□ -0.79
SSPN-206ENST00000539019 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
SSPN-206ENST00000539019 MYO15BQ96JP2 1530 aa10.09□□□□□ -0.79
SSPN-206ENST00000539019 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
SSPN-206ENST00000539019 SLC35F4A4IF30 521 aa10.08□□□□□ -0.8
SSPN-206ENST00000539019 VSIG8P0DPA2 414 aa10.08□□□□□ -0.8
SSPN-206ENST00000539019 INSM1Q01101 510 aaPredicted RBP10.08□□□□□ -0.8
SSPN-206ENST00000539019 CCDC155Q8N6L0 562 aa10.08□□□□□ -0.8
SSPN-206ENST00000539019 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
SSPN-206ENST00000539019 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
SSPN-206ENST00000539019 A0A1W2PRU2 124 aa10.07□□□□□ -0.8
SSPN-206ENST00000539019 TSGA10IPQ3SY00 556 aa10.07□□□□□ -0.8
SSPN-206ENST00000539019 PHTF2Q8N3S3 785 aa10.07□□□□□ -0.8
SSPN-206ENST00000539019 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
SSPN-206ENST00000539019 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
SSPN-206ENST00000539019 MEN1O00255 615 aa10.06□□□□□ -0.8
SSPN-206ENST00000539019 RNF144AP50876 292 aaPredicted RBP10.06□□□□□ -0.8
SSPN-206ENST00000539019 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
SSPN-206ENST00000539019 ESF1Q9H501 851 aaKnown RBP10.06□□□□□ -0.8
SSPN-206ENST00000539019 TRAK2O60296 914 aa10.05□□□□□ -0.8
SSPN-206ENST00000539019 CYP2U1Q7Z449 544 aa10.05□□□□□ -0.8
SSPN-206ENST00000539019 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
SSPN-206ENST00000539019 PRICKLE2Q7Z3G6 844 aa10.04□□□□□ -0.8
SSPN-206ENST00000539019 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
SSPN-206ENST00000539019 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
SSPN-206ENST00000539019 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
SSPN-206ENST00000539019 POM121Q96HA1 1249 aa10.02□□□□□ -0.8
SSPN-206ENST00000539019 NACADO15069 1562 aa10.02□□□□□ -0.81
SSPN-206ENST00000539019 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
SSPN-206ENST00000539019 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
SSPN-206ENST00000539019 GPC1P35052 558 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 NLRP3Q96P20 1036 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 RHOQP17081 205 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 ITGA6P23229 1130 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 CLN3Q13286 438 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
SSPN-206ENST00000539019 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
SSPN-206ENST00000539019 GNRH1P01148 92 aa10□□□□□ -0.81
SSPN-206ENST00000539019 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
SSPN-206ENST00000539019 STK17AQ9UEE5 414 aa10□□□□□ -0.81
SSPN-206ENST00000539019 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
SSPN-206ENST00000539019 FLIIQ13045 1269 aa9.99□□□□□ -0.81
SSPN-206ENST00000539019 USP4Q13107 963 aa9.99□□□□□ -0.81
SSPN-206ENST00000539019 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
SSPN-206ENST00000539019 VWA5B2Q8N398 1253 aa9.99□□□□□ -0.81
SSPN-206ENST00000539019 GRIP2Q9C0E4 1043 aa9.99□□□□□ -0.81
SSPN-206ENST00000539019 SOX11P35716 441 aa9.98□□□□□ -0.81
SSPN-206ENST00000539019 POU4F2Q12837 409 aa9.98□□□□□ -0.81
SSPN-206ENST00000539019 ZSCAN1Q8NBB4 408 aa9.98□□□□□ -0.81
SSPN-206ENST00000539019 IL2RAP01589 272 aa9.97□□□□□ -0.81
SSPN-206ENST00000539019 OXLD1Q5BKU9 147 aa9.97□□□□□ -0.81
SSPN-206ENST00000539019 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
SSPN-206ENST00000539019 CDC14CA4D256 554 aa9.96□□□□□ -0.82
SSPN-206ENST00000539019 RAD21O60216 631 aa9.96□□□□□ -0.82
SSPN-206ENST00000539019 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
SSPN-206ENST00000539019 SV2AQ7L0J3 742 aa9.96□□□□□ -0.82
SSPN-206ENST00000539019 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.82
SSPN-206ENST00000539019 KRT76Q01546 638 aa9.95□□□□□ -0.82
SSPN-206ENST00000539019 CENPCQ03188 943 aa9.95□□□□□ -0.82
SSPN-206ENST00000539019 PLPP7Q8NBV4 271 aa9.95□□□□□ -0.82
SSPN-206ENST00000539019 XAGE2Q96GT9 111 aa9.95□□□□□ -0.82
SSPN-206ENST00000539019 CUEDC1Q9NWM3 386 aaPredicted RBP9.95□□□□□ -0.82
SSPN-206ENST00000539019 MAP7D1Q3KQU3 841 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 WWC1Q8IX03 1113 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 CNTNAP3BQ96NU0 1288 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
SSPN-206ENST00000539019 CNTNAP3Q9BZ76 1288 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 ALG2Q9H553 416 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 HRH3Q9Y5N1 445 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 RB1CC1Q8TDY2 1594 aa9.94□□□□□ -0.82
SSPN-206ENST00000539019 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
SSPN-206ENST00000539019 STAU1O95793 577 aaKnown RBP9.93□□□□□ -0.82
SSPN-206ENST00000539019 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
SSPN-206ENST00000539019 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
SSPN-206ENST00000539019 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
SSPN-206ENST00000539019 SPATA31C2B4DYI2 1134 aa9.92□□□□□ -0.82
SSPN-206ENST00000539019 ESCO1Q5FWF5 840 aa9.91□□□□□ -0.82
SSPN-206ENST00000539019 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
SSPN-206ENST00000539019 ETNK1Q9HBU6 452 aa9.91□□□□□ -0.82
SSPN-206ENST00000539019 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
SSPN-206ENST00000539019 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
SSPN-206ENST00000539019 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
SSPN-206ENST00000539019 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
SSPN-206ENST00000539019 POM121CA8CG34 1229 aa9.89□□□□□ -0.83
SSPN-206ENST00000539019 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
SSPN-206ENST00000539019 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
SSPN-206ENST00000539019 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
SSPN-206ENST00000539019 FHDC1Q9C0D6 1143 aaPredicted RBP9.89□□□□□ -0.83
SSPN-206ENST00000539019 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 DBN1Q16643 649 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 TIMMDC1Q9NPL8 285 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 SKIP12755 728 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 PHKA2P46019 1235 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
SSPN-206ENST00000539019 ZNF837Q96EG3 531 aaPredicted RBP9.88□□□□□ -0.83
SSPN-206ENST00000539019 SCNN1DP51172 638 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms