RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
GCSHP4-201ENST00000538792 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
GCSHP4-201ENST00000538792 ZNF592Q92610 1267 aa9.49□□□□□ -0.89
GCSHP4-201ENST00000538792 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
GCSHP4-201ENST00000538792 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
GCSHP4-201ENST00000538792 PTGIRP43119 386 aa9.48□□□□□ -0.89
GCSHP4-201ENST00000538792 FLIIQ13045 1269 aa9.48□□□□□ -0.89
GCSHP4-201ENST00000538792 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
GCSHP4-201ENST00000538792 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
GCSHP4-201ENST00000538792 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
GCSHP4-201ENST00000538792 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
GCSHP4-201ENST00000538792 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
GCSHP4-201ENST00000538792 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
GCSHP4-201ENST00000538792 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.9
GCSHP4-201ENST00000538792 UBTFP17480 764 aaKnown RBP9.45□□□□□ -0.9
GCSHP4-201ENST00000538792 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
GCSHP4-201ENST00000538792 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
GCSHP4-201ENST00000538792 HMGXB3Q12766 1538 aa9.45□□□□□ -0.9
GCSHP4-201ENST00000538792 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
GCSHP4-201ENST00000538792 TRAK2O60296 914 aa9.44□□□□□ -0.9
GCSHP4-201ENST00000538792 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
GCSHP4-201ENST00000538792 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
GCSHP4-201ENST00000538792 H3BM21 787 aa9.43□□□□□ -0.9
GCSHP4-201ENST00000538792 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.43□□□□□ -0.9
GCSHP4-201ENST00000538792 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
GCSHP4-201ENST00000538792 RNF135Q8IUD6 432 aa9.42□□□□□ -0.9
GCSHP4-201ENST00000538792 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
GCSHP4-201ENST00000538792 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
GCSHP4-201ENST00000538792 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 RAD21O60216 631 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 PTSQ03393 145 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 SEMA3FQ13275 785 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 CLUAP1Q96AJ1 413 aa9.41□□□□□ -0.9
GCSHP4-201ENST00000538792 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 WIZO95785 1651 aa9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 ALG2Q9H553 416 aa9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
GCSHP4-201ENST00000538792 MEN1O00255 615 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 SOX11P35716 441 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 CYP2U1Q7Z449 544 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 ADAMTS19Q8TE59 1207 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 TRIM52Q96A61 297 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
GCSHP4-201ENST00000538792 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
GCSHP4-201ENST00000538792 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
GCSHP4-201ENST00000538792 NESP48681 1621 aa9.38□□□□□ -0.91
GCSHP4-201ENST00000538792 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
GCSHP4-201ENST00000538792 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
GCSHP4-201ENST00000538792 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
GCSHP4-201ENST00000538792 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 WIPF1O43516 503 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 MYCP01106 439 aaPredicted RBP9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 GMPRP36959 345 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 CLN3Q13286 438 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 IRF7Q92985 503 aa9.36□□□□□ -0.91
GCSHP4-201ENST00000538792 IL2RAP01589 272 aa9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 FNBP4Q8N3X1 1017 aaPredicted RBP9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 CCDC155Q8N6L0 562 aa9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 ESF1Q9H501 851 aaKnown RBP9.35□□□□□ -0.91
GCSHP4-201ENST00000538792 GNRH1P01148 92 aa9.34□□□□□ -0.91
GCSHP4-201ENST00000538792 RHOQP17081 205 aa9.34□□□□□ -0.91
GCSHP4-201ENST00000538792 USP4Q13107 963 aa9.34□□□□□ -0.91
GCSHP4-201ENST00000538792 VSIG8P0DPA2 414 aa9.33□□□□□ -0.92
GCSHP4-201ENST00000538792 GPC1P35052 558 aa9.33□□□□□ -0.92
GCSHP4-201ENST00000538792 NLRP3Q96P20 1036 aa9.33□□□□□ -0.92
GCSHP4-201ENST00000538792 GRIP2Q9C0E4 1043 aa9.33□□□□□ -0.92
GCSHP4-201ENST00000538792 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
GCSHP4-201ENST00000538792 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
GCSHP4-201ENST00000538792 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
GCSHP4-201ENST00000538792 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
GCSHP4-201ENST00000538792 SKIP12755 728 aa9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 UCN2Q96RP3 112 aa9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 ESYT1Q9BSJ8 1104 aa9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
GCSHP4-201ENST00000538792 ITGA6P23229 1130 aa9.3□□□□□ -0.92
GCSHP4-201ENST00000538792 POU4F2Q12837 409 aa9.3□□□□□ -0.92
GCSHP4-201ENST00000538792 SLC27A3Q5K4L6 730 aa9.3□□□□□ -0.92
GCSHP4-201ENST00000538792 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
GCSHP4-201ENST00000538792 SCNN1DP51172 638 aa9.29□□□□□ -0.92
GCSHP4-201ENST00000538792 CENPCQ03188 943 aa9.29□□□□□ -0.92
GCSHP4-201ENST00000538792 FHDC1Q9C0D6 1143 aaPredicted RBP9.29□□□□□ -0.92
GCSHP4-201ENST00000538792 CUEDC1Q9NWM3 386 aaPredicted RBP9.29□□□□□ -0.92
GCSHP4-201ENST00000538792 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
GCSHP4-201ENST00000538792 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
GCSHP4-201ENST00000538792 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
GCSHP4-201ENST00000538792 A6NJR5 290 aa9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 NCOA4Q13772 614 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms