RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
ATL3-203ENST00000538786 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
ATL3-203ENST00000538786 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
ATL3-203ENST00000538786 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
ATL3-203ENST00000538786 ELL2O00472 640 aaPredicted RBP18.9■□□□□ 0.62
ATL3-203ENST00000538786 PCDHB15Q9Y5E8 787 aa18.9■□□□□ 0.62
ATL3-203ENST00000538786 ARHGEF25Q86VW2 580 aa18.9■□□□□ 0.62
ATL3-203ENST00000538786 SKAP1Q86WV1 359 aa18.9■□□□□ 0.62
ATL3-203ENST00000538786 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
ATL3-203ENST00000538786 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
ATL3-203ENST00000538786 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
ATL3-203ENST00000538786 MSH6P52701 1360 aa18.88■□□□□ 0.61
ATL3-203ENST00000538786 GNAT3A8MTJ3 354 aa18.87■□□□□ 0.61
ATL3-203ENST00000538786 PDE4AP27815 886 aa18.87■□□□□ 0.61
ATL3-203ENST00000538786 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
ATL3-203ENST00000538786 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
ATL3-203ENST00000538786 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
ATL3-203ENST00000538786 RWDD1Q9H446 243 aaPredicted RBP18.86■□□□□ 0.61
ATL3-203ENST00000538786 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
ATL3-203ENST00000538786 BACH2Q9BYV9 841 aa18.86■□□□□ 0.61
ATL3-203ENST00000538786 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
ATL3-203ENST00000538786 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
ATL3-203ENST00000538786 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
ATL3-203ENST00000538786 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
ATL3-203ENST00000538786 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
ATL3-203ENST00000538786 TSPYL4Q9UJ04 414 aa18.84■□□□□ 0.61
ATL3-203ENST00000538786 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.6
ATL3-203ENST00000538786 ZBTB40Q9NUA8 1239 aa18.83■□□□□ 0.6
ATL3-203ENST00000538786 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
ATL3-203ENST00000538786 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
ATL3-203ENST00000538786 ABCC4O15439 1325 aa18.82■□□□□ 0.6
ATL3-203ENST00000538786 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
ATL3-203ENST00000538786 MIS18AQ9NYP9 233 aa18.81■□□□□ 0.6
ATL3-203ENST00000538786 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
ATL3-203ENST00000538786 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
ATL3-203ENST00000538786 RGS3P49796 1198 aa18.8■□□□□ 0.6
ATL3-203ENST00000538786 HDAC1Q13547 482 aaPredicted RBP18.8■□□□□ 0.6
ATL3-203ENST00000538786 IL17REQ8NFR9 667 aa18.8■□□□□ 0.6
ATL3-203ENST00000538786 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
ATL3-203ENST00000538786 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
ATL3-203ENST00000538786 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
ATL3-203ENST00000538786 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
ATL3-203ENST00000538786 TNS3Q68CZ2 1445 aa18.79■□□□□ 0.6
ATL3-203ENST00000538786 PXDNQ92626 1479 aa18.78■□□□□ 0.6
ATL3-203ENST00000538786 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
ATL3-203ENST00000538786 AXIN2Q9Y2T1 843 aa18.78■□□□□ 0.6
ATL3-203ENST00000538786 XIRP1Q702N8 1843 aaKnown RBP18.77■□□□□ 0.6
ATL3-203ENST00000538786 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.6
ATL3-203ENST00000538786 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
ATL3-203ENST00000538786 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
ATL3-203ENST00000538786 PLEKHO1Q53GL0 409 aaPredicted RBP18.76■□□□□ 0.59
ATL3-203ENST00000538786 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
ATL3-203ENST00000538786 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
ATL3-203ENST00000538786 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
ATL3-203ENST00000538786 PTPRCP08575 1304 aa18.76■□□□□ 0.59
ATL3-203ENST00000538786 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
ATL3-203ENST00000538786 SPATA31A3Q5VYP0 1347 aa18.76■□□□□ 0.59
ATL3-203ENST00000538786 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
ATL3-203ENST00000538786 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
ATL3-203ENST00000538786 BRINP3Q76B58 766 aa18.75■□□□□ 0.59
ATL3-203ENST00000538786 ERBB3P21860 1342 aa18.75■□□□□ 0.59
ATL3-203ENST00000538786 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
ATL3-203ENST00000538786 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
ATL3-203ENST00000538786 RGPD2P0DJD1 1756 aa18.74■□□□□ 0.59
ATL3-203ENST00000538786 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
ATL3-203ENST00000538786 ZNF530Q6P9A1 599 aaPredicted RBP18.73■□□□□ 0.59
ATL3-203ENST00000538786 RGS12O14924 1447 aa18.73■□□□□ 0.59
ATL3-203ENST00000538786 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
ATL3-203ENST00000538786 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
ATL3-203ENST00000538786 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
ATL3-203ENST00000538786 ABCC6O95255 1503 aa18.72■□□□□ 0.59
ATL3-203ENST00000538786 MSH5O43196 834 aa18.71■□□□□ 0.59
ATL3-203ENST00000538786 SLAIN2Q9P270 581 aa18.71■□□□□ 0.59
ATL3-203ENST00000538786 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
ATL3-203ENST00000538786 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 LGR6Q9HBX8 967 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
ATL3-203ENST00000538786 CPDO75976 1380 aa18.69■□□□□ 0.58
ATL3-203ENST00000538786 SOS2Q07890 1332 aaPredicted RBP18.67■□□□□ 0.58
ATL3-203ENST00000538786 CRYBG1Q9Y4K1 1723 aa18.67■□□□□ 0.58
ATL3-203ENST00000538786 COL18A1P39060 1754 aa18.67■□□□□ 0.58
ATL3-203ENST00000538786 TEFQ10587 303 aa18.66■□□□□ 0.58
ATL3-203ENST00000538786 IPO9Q96P70 1041 aaKnown RBP18.66■□□□□ 0.58
ATL3-203ENST00000538786 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
ATL3-203ENST00000538786 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
ATL3-203ENST00000538786 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
ATL3-203ENST00000538786 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
ATL3-203ENST00000538786 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
ATL3-203ENST00000538786 G2E3Q7L622 706 aa18.65■□□□□ 0.58
ATL3-203ENST00000538786 RAPGEF4Q8WZA2 1011 aa18.65■□□□□ 0.58
ATL3-203ENST00000538786 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
ATL3-203ENST00000538786 HOXB7P09629 217 aa18.64■□□□□ 0.58
ATL3-203ENST00000538786 EIF4A1P60842 406 aaKnown RBP18.64■□□□□ 0.58
ATL3-203ENST00000538786 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.58
ATL3-203ENST00000538786 GCC1Q96CN9 775 aa18.64■□□□□ 0.58
ATL3-203ENST00000538786 NUCB1Q02818 461 aa18.64■□□□□ 0.57
ATL3-203ENST00000538786 CHMP4AQ9BY43 222 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms