RNA–Protein interactions for RNA: ENST00000538715.5

PTPN6-211, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-211ENST00000538715 LRRC4BQ9NT99 713 aa22.14■■□□□ 1.13
PTPN6-211ENST00000538715 TMF1P82094 1093 aa22.13■■□□□ 1.13
PTPN6-211ENST00000538715 ZNF827Q17R98 1081 aa22.13■■□□□ 1.13
PTPN6-211ENST00000538715 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
PTPN6-211ENST00000538715 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
PTPN6-211ENST00000538715 LTV1Q96GA3 475 aaPredicted RBP22.12■■□□□ 1.13
PTPN6-211ENST00000538715 RGPD2P0DJD1 1756 aa22.11■■□□□ 1.13
PTPN6-211ENST00000538715 POLD1P28340 1107 aa22.1■■□□□ 1.13
PTPN6-211ENST00000538715 MEGF6O75095 1541 aa22.1■■□□□ 1.13
PTPN6-211ENST00000538715 KIF20BQ96Q89 1820 aa22.09■■□□□ 1.13
PTPN6-211ENST00000538715 NSD2O96028 1365 aa22.09■■□□□ 1.13
PTPN6-211ENST00000538715 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.13
PTPN6-211ENST00000538715 PNPLA7Q6ZV29 1317 aa22.07■■□□□ 1.12
PTPN6-211ENST00000538715 FYB1O15117 783 aa22.07■■□□□ 1.12
PTPN6-211ENST00000538715 PRIM1P49642 420 aaKnown RBP22.07■■□□□ 1.12
PTPN6-211ENST00000538715 SYTL4Q96C24 671 aaPredicted RBP22.07■■□□□ 1.12
PTPN6-211ENST00000538715 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
PTPN6-211ENST00000538715 INSRP06213 1382 aa22.07■■□□□ 1.12
PTPN6-211ENST00000538715 USP47Q96K76 1375 aa22.07■■□□□ 1.12
PTPN6-211ENST00000538715 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
PTPN6-211ENST00000538715 RAPGEF4Q8WZA2 1011 aa22.06■■□□□ 1.12
PTPN6-211ENST00000538715 FLT4P35916 1363 aa22.06■■□□□ 1.12
PTPN6-211ENST00000538715 PCDH11XQ9BZA7 1347 aa22.05■■□□□ 1.12
PTPN6-211ENST00000538715 PCDH11YQ9BZA8 1340 aa22.05■■□□□ 1.12
PTPN6-211ENST00000538715 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
PTPN6-211ENST00000538715 NBPF6Q5VWK0 638 aa22.03■■□□□ 1.12
PTPN6-211ENST00000538715 NBPF4Q96M43 638 aa22.03■■□□□ 1.12
PTPN6-211ENST00000538715 CCNL1Q9UK58 526 aaPredicted RBP22.03■■□□□ 1.12
PTPN6-211ENST00000538715 RRS1Q15050 365 aaKnown RBP22.02■■□□□ 1.12
PTPN6-211ENST00000538715 GGNBP2Q9H3C7 697 aa22.02■■□□□ 1.12
PTPN6-211ENST00000538715 C5P01031 1676 aa22.01■■□□□ 1.11
PTPN6-211ENST00000538715 FLAD1Q8NFF5 587 aa22■■□□□ 1.11
PTPN6-211ENST00000538715 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
PTPN6-211ENST00000538715 FBLN1P23142 703 aa21.99■■□□□ 1.11
PTPN6-211ENST00000538715 GPR162Q16538 588 aa21.99■■□□□ 1.11
PTPN6-211ENST00000538715 ANKRD26Q9UPS8 1709 aa21.99■■□□□ 1.11
PTPN6-211ENST00000538715 PKD1L3Q7Z443 1732 aa21.98■■□□□ 1.11
PTPN6-211ENST00000538715 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
PTPN6-211ENST00000538715 TAF1LQ8IZX4 1826 aa21.97■■□□□ 1.11
PTPN6-211ENST00000538715 PLEKHG2Q9H7P9 1386 aa21.97■■□□□ 1.11
PTPN6-211ENST00000538715 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
PTPN6-211ENST00000538715 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
PTPN6-211ENST00000538715 SMARCC1Q92922 1105 aaPredicted RBP21.95■■□□□ 1.1
PTPN6-211ENST00000538715 TRIM26Q12899 539 aaPredicted RBP21.94■■□□□ 1.1
PTPN6-211ENST00000538715 PALLDQ8WX93 1383 aa21.94■■□□□ 1.1
PTPN6-211ENST00000538715 GOLGB1Q14789 3259 aaKnown RBP21.94■■□□□ 1.1
PTPN6-211ENST00000538715 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
PTPN6-211ENST00000538715 ITGB4P16144 1822 aa21.93■■□□□ 1.1
PTPN6-211ENST00000538715 USHBP1Q8N6Y0 703 aa21.93■■□□□ 1.1
PTPN6-211ENST00000538715 KCNQ4P56696 695 aa21.92■■□□□ 1.1
PTPN6-211ENST00000538715 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
PTPN6-211ENST00000538715 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
PTPN6-211ENST00000538715 KLHL34Q8N239 644 aa21.91■■□□□ 1.1
PTPN6-211ENST00000538715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.91■■□□□ 1.1
PTPN6-211ENST00000538715 TOGARAM1Q9Y4F4 1720 aa21.9■■□□□ 1.1
PTPN6-211ENST00000538715 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
PTPN6-211ENST00000538715 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
PTPN6-211ENST00000538715 WASHC2AQ641Q2 1341 aa21.89■■□□□ 1.1
PTPN6-211ENST00000538715 CYP27B1O15528 508 aa21.89■■□□□ 1.09
PTPN6-211ENST00000538715 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
PTPN6-211ENST00000538715 CD2APQ9Y5K6 639 aa21.89■■□□□ 1.09
PTPN6-211ENST00000538715 MSH5O43196 834 aa21.88■■□□□ 1.09
PTPN6-211ENST00000538715 C1QTNF8P60827 252 aa21.88■■□□□ 1.09
PTPN6-211ENST00000538715 CARD14Q9BXL6 1004 aa21.88■■□□□ 1.09
PTPN6-211ENST00000538715 MAP2P11137 1827 aaKnown RBP21.87■■□□□ 1.09
PTPN6-211ENST00000538715 MPRIPQ6WCQ1 1025 aa21.87■■□□□ 1.09
PTPN6-211ENST00000538715 NLGN2Q8NFZ4 835 aa21.87■■□□□ 1.09
PTPN6-211ENST00000538715 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
PTPN6-211ENST00000538715 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
PTPN6-211ENST00000538715 AK7Q96M32 723 aa21.85■■□□□ 1.09
PTPN6-211ENST00000538715 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
PTPN6-211ENST00000538715 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.09
PTPN6-211ENST00000538715 SSFA2P28290 1259 aa21.83■■□□□ 1.09
PTPN6-211ENST00000538715 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
PTPN6-211ENST00000538715 PIGBQ92521 554 aa21.81■■□□□ 1.08
PTPN6-211ENST00000538715 ZNF831Q5JPB2 1677 aa21.8■■□□□ 1.08
PTPN6-211ENST00000538715 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
PTPN6-211ENST00000538715 LOC102724428A0A0B4J2F2 783 aa21.79■■□□□ 1.08
PTPN6-211ENST00000538715 PPM1GO15355 546 aaPredicted RBP21.79■■□□□ 1.08
PTPN6-211ENST00000538715 YBX3P16989 372 aaKnown RBP eCLIP21.79■■□□□ 1.08
PTPN6-211ENST00000538715 SIK1P57059 783 aa21.79■■□□□ 1.08
PTPN6-211ENST00000538715 EYA1Q99502 592 aa21.79■■□□□ 1.08
PTPN6-211ENST00000538715 TMOD3Q9NYL9 352 aa21.79■■□□□ 1.08
PTPN6-211ENST00000538715 MSL1Q68DK7 614 aa21.78■■□□□ 1.08
PTPN6-211ENST00000538715 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
PTPN6-211ENST00000538715 PHKG2P15735 406 aa21.77■■□□□ 1.08
PTPN6-211ENST00000538715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.76■■□□□ 1.07
PTPN6-211ENST00000538715 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
PTPN6-211ENST00000538715 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
PTPN6-211ENST00000538715 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
PTPN6-211ENST00000538715 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
PTPN6-211ENST00000538715 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
PTPN6-211ENST00000538715 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
PTPN6-211ENST00000538715 ADCY9O60503 1353 aa21.71■■□□□ 1.07
PTPN6-211ENST00000538715 KDRP35968 1356 aa21.71■■□□□ 1.07
PTPN6-211ENST00000538715 ATP10DQ9P241 1426 aa21.71■■□□□ 1.07
PTPN6-211ENST00000538715 PHF14O94880 888 aa21.7■■□□□ 1.06
PTPN6-211ENST00000538715 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
PTPN6-211ENST00000538715 KIF13BQ9NQT8 1826 aa21.7■■□□□ 1.06
PTPN6-211ENST00000538715 GNPATO15228 680 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms