RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 POLD1P28340 1107 aa21.37■■□□□ 1.01
PPP1CA-209ENST00000537694 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
PPP1CA-209ENST00000537694 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
PPP1CA-209ENST00000537694 USP54Q70EL1 1684 aa21.37■■□□□ 1.01
PPP1CA-209ENST00000537694 BTAF1O14981 1849 aa21.36■■□□□ 1.01
PPP1CA-209ENST00000537694 TMF1P82094 1093 aa21.36■■□□□ 1.01
PPP1CA-209ENST00000537694 USHBP1Q8N6Y0 703 aa21.35■■□□□ 1.01
PPP1CA-209ENST00000537694 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
PPP1CA-209ENST00000537694 MSH5O43196 834 aa21.34■■□□□ 1.01
PPP1CA-209ENST00000537694 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
PPP1CA-209ENST00000537694 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
PPP1CA-209ENST00000537694 ANKRD36BQ8N2N9 1353 aa21.34■■□□□ 1.01
PPP1CA-209ENST00000537694 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
PPP1CA-209ENST00000537694 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1.01
PPP1CA-209ENST00000537694 TIMELESSQ9UNS1 1208 aa21.32■■□□□ 1
PPP1CA-209ENST00000537694 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
PPP1CA-209ENST00000537694 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
PPP1CA-209ENST00000537694 USP47Q96K76 1375 aa21.29■■□□□ 1
PPP1CA-209ENST00000537694 PAPPAQ13219 1627 aa21.29■■□□□ 1
PPP1CA-209ENST00000537694 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
PPP1CA-209ENST00000537694 MAP3K5Q99683 1374 aa21.28■■□□□ 1
PPP1CA-209ENST00000537694 CDCA8Q53HL2 280 aa21.28■■□□□ 1
PPP1CA-209ENST00000537694 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
PPP1CA-209ENST00000537694 MEGF6O75095 1541 aa21.26■□□□□ 0.99
PPP1CA-209ENST00000537694 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
PPP1CA-209ENST00000537694 COL23A1Q86Y22 540 aaPredicted RBP21.26■□□□□ 0.99
PPP1CA-209ENST00000537694 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
PPP1CA-209ENST00000537694 NSD2O96028 1365 aa21.25■□□□□ 0.99
PPP1CA-209ENST00000537694 SMG6Q86US8 1419 aaKnown RBP21.25■□□□□ 0.99
PPP1CA-209ENST00000537694 PPM1GO15355 546 aaPredicted RBP21.24■□□□□ 0.99
PPP1CA-209ENST00000537694 NLGN2Q8NFZ4 835 aa21.24■□□□□ 0.99
PPP1CA-209ENST00000537694 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
PPP1CA-209ENST00000537694 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
PPP1CA-209ENST00000537694 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
PPP1CA-209ENST00000537694 CARD14Q9BXL6 1004 aa21.22■□□□□ 0.99
PPP1CA-209ENST00000537694 INSRP06213 1382 aa21.22■□□□□ 0.99
PPP1CA-209ENST00000537694 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-209ENST00000537694 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
PPP1CA-209ENST00000537694 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
PPP1CA-209ENST00000537694 CYP27B1O15528 508 aa21.2■□□□□ 0.98
PPP1CA-209ENST00000537694 C1QTNF8P60827 252 aa21.2■□□□□ 0.98
PPP1CA-209ENST00000537694 EMILIN1Q9Y6C2 1016 aa21.2■□□□□ 0.98
PPP1CA-209ENST00000537694 CHD4Q14839 1912 aa21.19■□□□□ 0.98
PPP1CA-209ENST00000537694 GOLGB1Q14789 3259 aaKnown RBP21.19■□□□□ 0.98
PPP1CA-209ENST00000537694 FLT4P35916 1363 aa21.19■□□□□ 0.98
PPP1CA-209ENST00000537694 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
PPP1CA-209ENST00000537694 GRIN3BO60391 1043 aa21.18■□□□□ 0.98
PPP1CA-209ENST00000537694 FLAD1Q8NFF5 587 aa21.18■□□□□ 0.98
PPP1CA-209ENST00000537694 DOT1LQ8TEK3 1739 aa21.18■□□□□ 0.98
PPP1CA-209ENST00000537694 SMARCC1Q92922 1105 aaPredicted RBP21.17■□□□□ 0.98
PPP1CA-209ENST00000537694 PALLDQ8WX93 1383 aa21.16■□□□□ 0.98
PPP1CA-209ENST00000537694 KIF24Q5T7B8 1368 aa21.15■□□□□ 0.98
PPP1CA-209ENST00000537694 YBX3P16989 372 aaKnown RBP eCLIP21.15■□□□□ 0.986e-9■■■□□ 17.7
PPP1CA-209ENST00000537694 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
PPP1CA-209ENST00000537694 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
PPP1CA-209ENST00000537694 PIGBQ92521 554 aa21.14■□□□□ 0.97
PPP1CA-209ENST00000537694 AK7Q96M32 723 aa21.14■□□□□ 0.97
PPP1CA-209ENST00000537694 LY75O60449 1722 aa21.14■□□□□ 0.97
PPP1CA-209ENST00000537694 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 SHANK3Q9BYB0 1731 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 PHF14O94880 888 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
PPP1CA-209ENST00000537694 EYA1Q99502 592 aa21.11■□□□□ 0.97
PPP1CA-209ENST00000537694 WASHC2AQ641Q2 1341 aa21.1■□□□□ 0.97
PPP1CA-209ENST00000537694 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
PPP1CA-209ENST00000537694 NKX1-1Q15270 411 aaPredicted RBP21.1■□□□□ 0.97
PPP1CA-209ENST00000537694 TUBGCP6Q96RT7 1819 aa21.1■□□□□ 0.97
PPP1CA-209ENST00000537694 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
PPP1CA-209ENST00000537694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
PPP1CA-209ENST00000537694 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
PPP1CA-209ENST00000537694 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 SIK1P57059 783 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 AMIGO3Q86WK7 504 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 COL24A1Q17RW2 1714 aa21.07■□□□□ 0.96
PPP1CA-209ENST00000537694 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
PPP1CA-209ENST00000537694 WWC3Q9ULE0 1092 aa21.05■□□□□ 0.96
PPP1CA-209ENST00000537694 LINC00116Q8NCU8 138 aa21.04■□□□□ 0.96
PPP1CA-209ENST00000537694 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
PPP1CA-209ENST00000537694 PHKG2P15735 406 aa21.03■□□□□ 0.96
PPP1CA-209ENST00000537694 SSFA2P28290 1259 aa21.03■□□□□ 0.96
PPP1CA-209ENST00000537694 GNPATO15228 680 aa21.02■□□□□ 0.96
PPP1CA-209ENST00000537694 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
PPP1CA-209ENST00000537694 C5P01031 1676 aa21.02■□□□□ 0.95
PPP1CA-209ENST00000537694 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.95
PPP1CA-209ENST00000537694 ITPK1Q13572 414 aa21.01■□□□□ 0.95
PPP1CA-209ENST00000537694 ATG3Q9NT62 314 aa21.01■□□□□ 0.95
PPP1CA-209ENST00000537694 RBM42Q9BTD8 480 aaKnown RBP20.99■□□□□ 0.95
PPP1CA-209ENST00000537694 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
PPP1CA-209ENST00000537694 IGSF1Q8N6C5 1336 aa20.99■□□□□ 0.95
PPP1CA-209ENST00000537694 ZNF526Q8TF50 670 aaPredicted RBP20.98■□□□□ 0.95
PPP1CA-209ENST00000537694 ITGB4P16144 1822 aa20.98■□□□□ 0.95
PPP1CA-209ENST00000537694 C4BP0C0L5 1744 aa20.98■□□□□ 0.95
PPP1CA-209ENST00000537694 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
PPP1CA-209ENST00000537694 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms