RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
CCDC170-202ENST00000537358 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
CCDC170-202ENST00000537358 FYB1O15117 783 aa13.65□□□□□ -0.22
CCDC170-202ENST00000537358 RGPD2P0DJD1 1756 aa13.65□□□□□ -0.22
CCDC170-202ENST00000537358 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
CCDC170-202ENST00000537358 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
CCDC170-202ENST00000537358 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
CCDC170-202ENST00000537358 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
CCDC170-202ENST00000537358 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
CCDC170-202ENST00000537358 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
CCDC170-202ENST00000537358 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
CCDC170-202ENST00000537358 FLT4P35916 1363 aa13.62□□□□□ -0.23
CCDC170-202ENST00000537358 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
CCDC170-202ENST00000537358 FBLN1P23142 703 aa13.62□□□□□ -0.23
CCDC170-202ENST00000537358 MTFR1LQ9H019 292 aa13.62□□□□□ -0.23
CCDC170-202ENST00000537358 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
CCDC170-202ENST00000537358 MYOM1P52179 1685 aa13.61□□□□□ -0.23
CCDC170-202ENST00000537358 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
CCDC170-202ENST00000537358 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
CCDC170-202ENST00000537358 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
CCDC170-202ENST00000537358 INSRP06213 1382 aa13.6□□□□□ -0.23
CCDC170-202ENST00000537358 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
CCDC170-202ENST00000537358 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
CCDC170-202ENST00000537358 NSD3Q9BZ95 1437 aa13.6□□□□□ -0.23
CCDC170-202ENST00000537358 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
CCDC170-202ENST00000537358 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
CCDC170-202ENST00000537358 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
CCDC170-202ENST00000537358 NBPF6Q5VWK0 638 aa13.59□□□□□ -0.23
CCDC170-202ENST00000537358 NBPF4Q96M43 638 aa13.59□□□□□ -0.23
CCDC170-202ENST00000537358 PDGFDQ9GZP0 370 aaPredicted RBP13.59□□□□□ -0.23
CCDC170-202ENST00000537358 MEGF6O75095 1541 aa13.59□□□□□ -0.23
CCDC170-202ENST00000537358 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
CCDC170-202ENST00000537358 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
CCDC170-202ENST00000537358 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
CCDC170-202ENST00000537358 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
CCDC170-202ENST00000537358 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
CCDC170-202ENST00000537358 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
CCDC170-202ENST00000537358 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
CCDC170-202ENST00000537358 YY1P25490 414 aa13.57□□□□□ -0.24
CCDC170-202ENST00000537358 PTGER2P43116 358 aa13.57□□□□□ -0.24
CCDC170-202ENST00000537358 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
CCDC170-202ENST00000537358 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
CCDC170-202ENST00000537358 LY75O60449 1722 aa13.56□□□□□ -0.24
CCDC170-202ENST00000537358 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC170-202ENST00000537358 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
CCDC170-202ENST00000537358 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
CCDC170-202ENST00000537358 LRRC4BQ9NT99 713 aa13.56□□□□□ -0.24
CCDC170-202ENST00000537358 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
CCDC170-202ENST00000537358 POLD1P28340 1107 aa13.55□□□□□ -0.24
CCDC170-202ENST00000537358 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
CCDC170-202ENST00000537358 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
CCDC170-202ENST00000537358 ARXQ96QS3 562 aa13.54□□□□□ -0.24
CCDC170-202ENST00000537358 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
CCDC170-202ENST00000537358 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
CCDC170-202ENST00000537358 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
CCDC170-202ENST00000537358 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
CCDC170-202ENST00000537358 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
CCDC170-202ENST00000537358 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
CCDC170-202ENST00000537358 SYT17Q9BSW7 474 aa13.52□□□□□ -0.25
CCDC170-202ENST00000537358 NSD2O96028 1365 aa13.52□□□□□ -0.25
CCDC170-202ENST00000537358 PKD1L3Q7Z443 1732 aa13.51□□□□□ -0.25
CCDC170-202ENST00000537358 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
CCDC170-202ENST00000537358 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
CCDC170-202ENST00000537358 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
CCDC170-202ENST00000537358 KCNQ4P56696 695 aa13.5□□□□□ -0.25
CCDC170-202ENST00000537358 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
CCDC170-202ENST00000537358 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
CCDC170-202ENST00000537358 ITGB4P16144 1822 aa13.5□□□□□ -0.25
CCDC170-202ENST00000537358 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
CCDC170-202ENST00000537358 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
CCDC170-202ENST00000537358 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
CCDC170-202ENST00000537358 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
CCDC170-202ENST00000537358 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
CCDC170-202ENST00000537358 C5P01031 1676 aa13.49□□□□□ -0.25
CCDC170-202ENST00000537358 CHD4Q14839 1912 aa13.49□□□□□ -0.25
CCDC170-202ENST00000537358 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
CCDC170-202ENST00000537358 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CCDC170-202ENST00000537358 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
CCDC170-202ENST00000537358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC170-202ENST00000537358 POLKQ9UBT6 870 aa13.48□□□□□ -0.25
CCDC170-202ENST00000537358 EYA1Q99502 592 aa13.47□□□□□ -0.25
CCDC170-202ENST00000537358 PANK3Q9H999 370 aa13.47□□□□□ -0.25
CCDC170-202ENST00000537358 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
CCDC170-202ENST00000537358 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.25
CCDC170-202ENST00000537358 GPR162Q16538 588 aa13.46□□□□□ -0.25
CCDC170-202ENST00000537358 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
CCDC170-202ENST00000537358 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
CCDC170-202ENST00000537358 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
CCDC170-202ENST00000537358 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
CCDC170-202ENST00000537358 TOGARAM1Q9Y4F4 1720 aa13.45□□□□□ -0.26
CCDC170-202ENST00000537358 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
CCDC170-202ENST00000537358 AK7Q96M32 723 aa13.45□□□□□ -0.26
CCDC170-202ENST00000537358 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
CCDC170-202ENST00000537358 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
CCDC170-202ENST00000537358 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
CCDC170-202ENST00000537358 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
CCDC170-202ENST00000537358 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
CCDC170-202ENST00000537358 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
CCDC170-202ENST00000537358 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
CCDC170-202ENST00000537358 PHKG2P15735 406 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms