RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 SCLT1Q96NL6 688 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 CAVIN2O95810 425 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 ARID4AP29374 1257 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-216ENST00000537335 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 SCAND2PQ9GZW5 306 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-216ENST00000537335 VPS18Q9P253 973 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
POLR1B-216ENST00000537335 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 XBP1P17861 261 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■□□□□ 10.7
POLR1B-216ENST00000537335 SPECC1Q5M775 1068 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 KIF3BO15066 747 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 NEBLO76041 1014 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 GNG11P61952 73 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
POLR1B-216ENST00000537335 BCCIPQ9P287 314 aaKnown RBP eCLIP13.8□□□□□ -0.2
POLR1B-216ENST00000537335 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
POLR1B-216ENST00000537335 GTF3C6Q969F1 213 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 HCLS1P14317 486 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-216ENST00000537335 FAM114A1Q8IWE2 563 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 ATRIPQ8WXE1 791 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 C9orf78Q9NZ63 289 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-216ENST00000537335 ERICH2A1L162 156 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC6Q16204 474 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 CTAGE5O15320 804 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 STIM1Q13586 685 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 RNF168Q8IYW5 571 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-216ENST00000537335 FBF1Q8TES7 1133 aa13.79□□□□□ -0.2
POLR1B-216ENST00000537335 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-216ENST00000537335 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
POLR1B-216ENST00000537335 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
POLR1B-216ENST00000537335 GNAI1P63096 354 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 ZNF165P49910 485 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 STK26Q9P289 416 aa13.78□□□□□ -0.2
POLR1B-216ENST00000537335 SKILP12757 684 aa13.77□□□□□ -0.2
POLR1B-216ENST00000537335 HIP1O00291 1037 aa13.77□□□□□ -0.21
POLR1B-216ENST00000537335 CEP112Q8N8E3 955 aa13.77□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.21
POLR1B-216ENST00000537335 FAM177BA6PVY3 158 aa13.77□□□□□ -0.21
POLR1B-216ENST00000537335 HSF2BPO75031 334 aa13.77□□□□□ -0.21
POLR1B-216ENST00000537335 ATP2B1P20020 1258 aa13.77□□□□□ -0.21
POLR1B-216ENST00000537335 MVPQ14764 893 aaKnown RBP13.77□□□□□ -0.21
POLR1B-216ENST00000537335 C6orf163Q5TEZ5 329 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 DNAI1Q9UI46 699 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 OPA1O60313 960 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
POLR1B-216ENST00000537335 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR1B-216ENST00000537335 TUBB4BP68371 445 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-216ENST00000537335 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
POLR1B-216ENST00000537335 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
POLR1B-216ENST00000537335 MAATS1Q7Z4T9 603 aa13.75□□□□□ -0.21
POLR1B-216ENST00000537335 ERO1AQ96HE7 468 aa13.75□□□□□ -0.21
POLR1B-216ENST00000537335 SPA17Q15506 151 aa13.75□□□□□ -0.21
POLR1B-216ENST00000537335 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
POLR1B-216ENST00000537335 GCKP35557 465 aa13.75□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 INPP5BP32019 993 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
POLR1B-216ENST00000537335 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
POLR1B-216ENST00000537335 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 CTAGE15A4D2H0 777 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 TUBBP07437 444 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 CTAGE8P0CG41 777 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
POLR1B-216ENST00000537335 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 CTAGE6Q86UF2 777 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 CTAGE4Q8IX94 777 aa13.74□□□□□ -0.21
POLR1B-216ENST00000537335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■■■■ 96.1
POLR1B-216ENST00000537335 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-216ENST00000537335 STK3Q13188 491 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 UBE2HP62256 183 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
POLR1B-216ENST00000537335 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 PDRG1Q9NUG6 133 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 SYCP1Q15431 976 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 FERMT3Q86UX7 667 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 ANKS4BQ8N8V4 417 aa13.73□□□□□ -0.21
POLR1B-216ENST00000537335 KIF3CO14782 793 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms