RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
CCDC7-208ENST00000537047 KCNMA1Q12791 1236 aa12.53□□□□□ -0.4
CCDC7-208ENST00000537047 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
CCDC7-208ENST00000537047 MEN1O00255 615 aa12.52□□□□□ -0.41
CCDC7-208ENST00000537047 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
CCDC7-208ENST00000537047 A0A1W2PRU2 124 aa12.51□□□□□ -0.41
CCDC7-208ENST00000537047 ZNF385CQ66K41 422 aaPredicted RBP12.51□□□□□ -0.41
CCDC7-208ENST00000537047 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
CCDC7-208ENST00000537047 PCDHB11Q9Y5F2 797 aa12.51□□□□□ -0.41
CCDC7-208ENST00000537047 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
CCDC7-208ENST00000537047 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CCDC7-208ENST00000537047 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
CCDC7-208ENST00000537047 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
CCDC7-208ENST00000537047 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
CCDC7-208ENST00000537047 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
CCDC7-208ENST00000537047 SOCS7O14512 581 aa12.47□□□□□ -0.41
CCDC7-208ENST00000537047 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
CCDC7-208ENST00000537047 SVOPQ8N4V2 548 aa12.46□□□□□ -0.41
CCDC7-208ENST00000537047 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
CCDC7-208ENST00000537047 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
CCDC7-208ENST00000537047 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
CCDC7-208ENST00000537047 TRAK2O60296 914 aa12.44□□□□□ -0.42
CCDC7-208ENST00000537047 POU4F2Q12837 409 aa12.44□□□□□ -0.42
CCDC7-208ENST00000537047 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
CCDC7-208ENST00000537047 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
CCDC7-208ENST00000537047 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
CCDC7-208ENST00000537047 ARHGEF15O94989 841 aa12.43□□□□□ -0.42
CCDC7-208ENST00000537047 MCCD1P59942 119 aaPredicted RBP12.43□□□□□ -0.42
CCDC7-208ENST00000537047 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
CCDC7-208ENST00000537047 IRF5Q13568 498 aa12.42□□□□□ -0.42
CCDC7-208ENST00000537047 GAS6Q14393 721 aa12.42□□□□□ -0.42
CCDC7-208ENST00000537047 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
CCDC7-208ENST00000537047 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
CCDC7-208ENST00000537047 RASSF7Q02833 373 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
CCDC7-208ENST00000537047 GPR25O00155 361 aa12.4□□□□□ -0.42
CCDC7-208ENST00000537047 GPC1P35052 558 aa12.4□□□□□ -0.42
CCDC7-208ENST00000537047 CLN3Q13286 438 aa12.4□□□□□ -0.42
CCDC7-208ENST00000537047 SLC27A3Q5K4L6 730 aa12.4□□□□□ -0.42
CCDC7-208ENST00000537047 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
CCDC7-208ENST00000537047 DBN1Q16643 649 aa12.39□□□□□ -0.43
CCDC7-208ENST00000537047 LYPD4Q6UWN0 246 aa12.39□□□□□ -0.43
CCDC7-208ENST00000537047 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
CCDC7-208ENST00000537047 TMEM151AQ8N4L1 468 aa12.39□□□□□ -0.43
CCDC7-208ENST00000537047 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
CCDC7-208ENST00000537047 APBB1O00213 710 aa12.38□□□□□ -0.43
CCDC7-208ENST00000537047 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
CCDC7-208ENST00000537047 SRSF11Q05519 484 aaKnown RBP12.38□□□□□ -0.43
CCDC7-208ENST00000537047 GDF11O95390 407 aa12.37□□□□□ -0.43
CCDC7-208ENST00000537047 IL2RAP01589 272 aa12.37□□□□□ -0.43
CCDC7-208ENST00000537047 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
CCDC7-208ENST00000537047 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
CCDC7-208ENST00000537047 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
CCDC7-208ENST00000537047 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
CCDC7-208ENST00000537047 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
CCDC7-208ENST00000537047 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
CCDC7-208ENST00000537047 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
CCDC7-208ENST00000537047 ZNF592Q92610 1267 aa12.35□□□□□ -0.43
CCDC7-208ENST00000537047 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
CCDC7-208ENST00000537047 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
CCDC7-208ENST00000537047 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
CCDC7-208ENST00000537047 GMCL1Q96IK5 515 aa12.34□□□□□ -0.43
CCDC7-208ENST00000537047 DYRK1BQ9Y463 629 aa12.34□□□□□ -0.43
CCDC7-208ENST00000537047 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
CCDC7-208ENST00000537047 CELA2BP08218 269 aaPredicted RBP12.32□□□□□ -0.44
CCDC7-208ENST00000537047 CENPCQ03188 943 aa12.32□□□□□ -0.44
CCDC7-208ENST00000537047 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
CCDC7-208ENST00000537047 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
CCDC7-208ENST00000537047 GNRH1P01148 92 aa12.31□□□□□ -0.44
CCDC7-208ENST00000537047 ABL2P42684 1182 aa12.31□□□□□ -0.44
CCDC7-208ENST00000537047 PHKA2P46019 1235 aa12.31□□□□□ -0.44
CCDC7-208ENST00000537047 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
CCDC7-208ENST00000537047 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
CCDC7-208ENST00000537047 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
CCDC7-208ENST00000537047 IRS1P35568 1242 aa12.3□□□□□ -0.44
CCDC7-208ENST00000537047 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC7-208ENST00000537047 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
CCDC7-208ENST00000537047 HRH3Q9Y5N1 445 aa12.3□□□□□ -0.44
CCDC7-208ENST00000537047 THBS1P07996 1170 aa12.29□□□□□ -0.44
CCDC7-208ENST00000537047 MARSP56192 900 aaKnown RBP12.29□□□□□ -0.44
CCDC7-208ENST00000537047 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
CCDC7-208ENST00000537047 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
CCDC7-208ENST00000537047 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
CCDC7-208ENST00000537047 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 RNF135Q8IUD6 432 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
CCDC7-208ENST00000537047 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 IGF1RP08069 1367 aa12.27□□□□□ -0.45
CCDC7-208ENST00000537047 LOC100996750A0A140TA64 210 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 H7C1W4 665 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 MAP3K10Q02779 954 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 WDR44Q5JSH3 913 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 KRTAP4-6Q9BYQ5 205 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 ETNK1Q9HBU6 452 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms