RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 DEFB132Q7Z7B7 95 aa25.92■■□□□ 1.74
COPS7A-205ENST00000536872 AEBP1Q8IUX7 1158 aa25.92■■□□□ 1.74
COPS7A-205ENST00000536872 ACSBG1Q96GR2 724 aa25.91■■□□□ 1.74
COPS7A-205ENST00000536872 U2SURPO15042 1029 aaKnown RBP25.9■■□□□ 1.74
COPS7A-205ENST00000536872 APBA3O96018 575 aa25.89■■□□□ 1.74
COPS7A-205ENST00000536872 HMOX1P09601 288 aa25.89■■□□□ 1.74
COPS7A-205ENST00000536872 PARD3Q8TEW0 1356 aa25.88■■□□□ 1.73
COPS7A-205ENST00000536872 RALBP1Q15311 655 aa25.88■■□□□ 1.73
COPS7A-205ENST00000536872 PTF1AQ7RTS3 328 aa25.87■■□□□ 1.73
COPS7A-205ENST00000536872 SPG7Q9UQ90 795 aa25.87■■□□□ 1.73
COPS7A-205ENST00000536872 BAG6P46379 1132 aa25.86■■□□□ 1.73
COPS7A-205ENST00000536872 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
COPS7A-205ENST00000536872 KCNQ2O43526 872 aa25.85■■□□□ 1.73
COPS7A-205ENST00000536872 EN1Q05925 392 aaPredicted RBP25.85■■□□□ 1.73
COPS7A-205ENST00000536872 CYP27B1O15528 508 aa25.83■■□□□ 1.73
COPS7A-205ENST00000536872 SYTL4Q96C24 671 aaPredicted RBP25.83■■□□□ 1.73
COPS7A-205ENST00000536872 BCL11BQ9C0K0 894 aaPredicted RBP25.83■■□□□ 1.73
COPS7A-205ENST00000536872 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
COPS7A-205ENST00000536872 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
COPS7A-205ENST00000536872 PLEKHO1Q53GL0 409 aaPredicted RBP25.82■■□□□ 1.72
COPS7A-205ENST00000536872 NUDCQ9Y266 331 aa25.82■■□□□ 1.72
COPS7A-205ENST00000536872 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
COPS7A-205ENST00000536872 PRIM1P49642 420 aaKnown RBP25.8■■□□□ 1.72
COPS7A-205ENST00000536872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.8■■□□□ 1.72
COPS7A-205ENST00000536872 RGPD1P0DJD0 1748 aa25.8■■□□□ 1.72
COPS7A-205ENST00000536872 BCL9O00512 1426 aa25.79■■□□□ 1.72
COPS7A-205ENST00000536872 U2AF1L5P0DN76 240 aaPredicted RBP25.78■■□□□ 1.72
COPS7A-205ENST00000536872 U2AF1Q01081 240 aaKnown RBP eCLIP25.78■■□□□ 1.72
COPS7A-205ENST00000536872 EZH2Q15910 746 aaKnown RBP25.78■■□□□ 1.72
COPS7A-205ENST00000536872 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
COPS7A-205ENST00000536872 SBF2Q86WG5 1849 aa25.78■■□□□ 1.72
COPS7A-205ENST00000536872 IFNL2Q8IZJ0 200 aa25.77■■□□□ 1.72
COPS7A-205ENST00000536872 PRKRIP1Q9H875 184 aaPredicted RBP25.77■■□□□ 1.72
COPS7A-205ENST00000536872 SHANK3Q9BYB0 1731 aa25.77■■□□□ 1.72
COPS7A-205ENST00000536872 AMOTQ4VCS5 1084 aa25.76■■□□□ 1.71
COPS7A-205ENST00000536872 MYBBP1AQ9BQG0 1328 aaKnown RBP25.76■■□□□ 1.71
COPS7A-205ENST00000536872 KDRP35968 1356 aa25.76■■□□□ 1.71
COPS7A-205ENST00000536872 PHKG2P15735 406 aa25.75■■□□□ 1.71
COPS7A-205ENST00000536872 TNS1Q9HBL0 1735 aaKnown RBP25.74■■□□□ 1.71
COPS7A-205ENST00000536872 CAMKK2Q96RR4 588 aa25.74■■□□□ 1.71
COPS7A-205ENST00000536872 C1orf141Q5JVX7 400 aa25.73■■□□□ 1.71
COPS7A-205ENST00000536872 PKD1L3Q7Z443 1732 aa25.72■■□□□ 1.71
COPS7A-205ENST00000536872 MPRIPQ6WCQ1 1025 aa25.71■■□□□ 1.71
COPS7A-205ENST00000536872 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
COPS7A-205ENST00000536872 NKX1-1Q15270 411 aaPredicted RBP25.7■■□□□ 1.7
COPS7A-205ENST00000536872 PLSCR1O15162 318 aa25.68■■□□□ 1.7
COPS7A-205ENST00000536872 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
COPS7A-205ENST00000536872 RSPH6AQ9H0K4 717 aa25.68■■□□□ 1.7
COPS7A-205ENST00000536872 ANP32CO43423 234 aa25.67■■□□□ 1.7
COPS7A-205ENST00000536872 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
COPS7A-205ENST00000536872 NHSQ6T4R5 1651 aa25.67■■□□□ 1.7
COPS7A-205ENST00000536872 DOT1LQ8TEK3 1739 aa25.66■■□□□ 1.7
COPS7A-205ENST00000536872 PHACTR3Q96KR7 559 aa25.66■■□□□ 1.7
COPS7A-205ENST00000536872 FCHSD2O94868 740 aa25.65■■□□□ 1.7
COPS7A-205ENST00000536872 DCAF5Q96JK2 942 aa25.65■■□□□ 1.7
COPS7A-205ENST00000536872 PLEKHG2Q9H7P9 1386 aa25.65■■□□□ 1.7
COPS7A-205ENST00000536872 AKAP4Q5JQC9 854 aa25.64■■□□□ 1.7
COPS7A-205ENST00000536872 TMOD3Q9NYL9 352 aa25.64■■□□□ 1.7
COPS7A-205ENST00000536872 BTAF1O14981 1849 aa25.63■■□□□ 1.69
COPS7A-205ENST00000536872 TXNRD1Q16881 649 aa25.63■■□□□ 1.69
COPS7A-205ENST00000536872 PROM2Q8N271 834 aa25.63■■□□□ 1.69
COPS7A-205ENST00000536872 PIGBQ92521 554 aa25.63■■□□□ 1.69
COPS7A-205ENST00000536872 CABP4P57796 275 aa25.62■■□□□ 1.69
COPS7A-205ENST00000536872 LGR6Q9HBX8 967 aa25.61■■□□□ 1.69
COPS7A-205ENST00000536872 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
COPS7A-205ENST00000536872 ERVV-2B6SEH9 535 aa25.59■■□□□ 1.69
COPS7A-205ENST00000536872 NEFMP07197 916 aa25.59■■□□□ 1.69
COPS7A-205ENST00000536872 KCNQ4P56696 695 aa25.59■■□□□ 1.69
COPS7A-205ENST00000536872 WDR43Q15061 677 aaKnown RBP eCLIP25.59■■□□□ 1.69
COPS7A-205ENST00000536872 TOGARAM1Q9Y4F4 1720 aa25.58■■□□□ 1.69
COPS7A-205ENST00000536872 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
COPS7A-205ENST00000536872 KDM6AO15550 1401 aaPredicted RBP25.57■■□□□ 1.68
COPS7A-205ENST00000536872 PSDA5PKW4 1024 aaPredicted RBP25.57■■□□□ 1.68
COPS7A-205ENST00000536872 RNMTO43148 476 aaKnown RBP25.57■■□□□ 1.68
COPS7A-205ENST00000536872 ITGB4P16144 1822 aa25.57■■□□□ 1.68
COPS7A-205ENST00000536872 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
COPS7A-205ENST00000536872 CCDC184Q52MB2 194 aa25.56■■□□□ 1.68
COPS7A-205ENST00000536872 NFATC2IPQ8NCF5 419 aa25.56■■□□□ 1.68
COPS7A-205ENST00000536872 R3HDM1Q15032 1099 aaKnown RBP25.55■■□□□ 1.68
COPS7A-205ENST00000536872 PNNQ9H307 717 aaKnown RBP25.55■■□□□ 1.68
COPS7A-205ENST00000536872 ASAP1Q9ULH1 1129 aa25.55■■□□□ 1.68
COPS7A-205ENST00000536872 SMARCC1Q92922 1105 aaPredicted RBP25.54■■□□□ 1.68
COPS7A-205ENST00000536872 LRRC4BQ9NT99 713 aa25.53■■□□□ 1.68
COPS7A-205ENST00000536872 CCNL1Q9UK58 526 aaPredicted RBP25.53■■□□□ 1.68
COPS7A-205ENST00000536872 MAP3K5Q99683 1374 aa25.53■■□□□ 1.68
COPS7A-205ENST00000536872 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
COPS7A-205ENST00000536872 PLEKHF1Q96S99 279 aa25.52■■□□□ 1.68
COPS7A-205ENST00000536872 ADAMTS8Q9UP79 889 aa25.52■■□□□ 1.68
COPS7A-205ENST00000536872 MAPK8IP3Q9UPT6 1336 aa25.52■■□□□ 1.68
COPS7A-205ENST00000536872 PALLDQ8WX93 1383 aa25.52■■□□□ 1.68
COPS7A-205ENST00000536872 SLC27A3Q5K4L6 730 aa25.51■■□□□ 1.67
COPS7A-205ENST00000536872 IL17REQ8NFR9 667 aa25.51■■□□□ 1.67
COPS7A-205ENST00000536872 ATG3Q9NT62 314 aa25.51■■□□□ 1.67
COPS7A-205ENST00000536872 RTF1Q92541 710 aaKnown RBP25.5■■□□□ 1.67
COPS7A-205ENST00000536872 RREB1Q92766 1687 aa25.5■■□□□ 1.67
COPS7A-205ENST00000536872 SLC52A2Q9HAB3 445 aa25.5■■□□□ 1.67
COPS7A-205ENST00000536872 ANO8Q9HCE9 1232 aaPredicted RBP25.5■■□□□ 1.67
COPS7A-205ENST00000536872 RBM42Q9BTD8 480 aaKnown RBP25.49■■□□□ 1.67
COPS7A-205ENST00000536872 MRS2Q9HD23 443 aa25.49■■□□□ 1.67
COPS7A-205ENST00000536872 STK32BQ9NY57 414 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms