RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
TNFRSF1B-204ENST00000536782 NBPF6Q5VWK0 638 aa27.41■■□□□ 1.98
TNFRSF1B-204ENST00000536782 SYTL4Q96C24 671 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF1B-204ENST00000536782 NBPF4Q96M43 638 aa27.41■■□□□ 1.98
TNFRSF1B-204ENST00000536782 MEGF6O75095 1541 aa27.41■■□□□ 1.98
TNFRSF1B-204ENST00000536782 ZNF827Q17R98 1081 aa27.4■■□□□ 1.98
TNFRSF1B-204ENST00000536782 LY75O60449 1722 aa27.39■■□□□ 1.98
TNFRSF1B-204ENST00000536782 PRIM1P49642 420 aaKnown RBP27.39■■□□□ 1.98
TNFRSF1B-204ENST00000536782 SLC27A3Q5K4L6 730 aa27.39■■□□□ 1.98
TNFRSF1B-204ENST00000536782 COL24A1Q17RW2 1714 aa27.38■■□□□ 1.97
TNFRSF1B-204ENST00000536782 CGNL1Q0VF96 1302 aa27.38■■□□□ 1.97
TNFRSF1B-204ENST00000536782 USHBP1Q8N6Y0 703 aa27.37■■□□□ 1.97
TNFRSF1B-204ENST00000536782 RAPGEF4Q8WZA2 1011 aa27.37■■□□□ 1.97
TNFRSF1B-204ENST00000536782 KIF20BQ96Q89 1820 aa27.37■■□□□ 1.97
TNFRSF1B-204ENST00000536782 INSRP06213 1382 aa27.36■■□□□ 1.97
TNFRSF1B-204ENST00000536782 HSP90AB2PQ58FF8 381 aa27.36■■□□□ 1.97
TNFRSF1B-204ENST00000536782 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
TNFRSF1B-204ENST00000536782 FHDC1Q9C0D6 1143 aaPredicted RBP27.36■■□□□ 1.97
TNFRSF1B-204ENST00000536782 CLSPNQ9HAW4 1339 aa27.36■■□□□ 1.97
TNFRSF1B-204ENST00000536782 FLT4P35916 1363 aa27.35■■□□□ 1.97
TNFRSF1B-204ENST00000536782 KIF24Q5T7B8 1368 aa27.35■■□□□ 1.97
TNFRSF1B-204ENST00000536782 SYT17Q9BSW7 474 aa27.35■■□□□ 1.97
TNFRSF1B-204ENST00000536782 CHD4Q14839 1912 aa27.35■■□□□ 1.97
TNFRSF1B-204ENST00000536782 NSD2O96028 1365 aa27.35■■□□□ 1.97
TNFRSF1B-204ENST00000536782 AKT1S1Q96B36 256 aa27.34■■□□□ 1.97
TNFRSF1B-204ENST00000536782 NSD3Q9BZ95 1437 aa27.33■■□□□ 1.97
TNFRSF1B-204ENST00000536782 TATP17735 454 aaPredicted RBP27.33■■□□□ 1.97
TNFRSF1B-204ENST00000536782 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
TNFRSF1B-204ENST00000536782 ARXQ96QS3 562 aa27.3■■□□□ 1.96
TNFRSF1B-204ENST00000536782 KCNQ4P56696 695 aa27.29■■□□□ 1.96
TNFRSF1B-204ENST00000536782 SLC16A10Q8TF71 515 aa27.28■■□□□ 1.96
TNFRSF1B-204ENST00000536782 TFCP2L1Q9NZI6 479 aa27.28■■□□□ 1.96
TNFRSF1B-204ENST00000536782 EMILIN1Q9Y6C2 1016 aa27.28■■□□□ 1.96
TNFRSF1B-204ENST00000536782 PCDH11XQ9BZA7 1347 aa27.27■■□□□ 1.96
TNFRSF1B-204ENST00000536782 PCDH11YQ9BZA8 1340 aa27.27■■□□□ 1.96
TNFRSF1B-204ENST00000536782 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
TNFRSF1B-204ENST00000536782 PNPLA7Q6ZV29 1317 aa27.26■■□□□ 1.95
TNFRSF1B-204ENST00000536782 CCNL1Q9UK58 526 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF1B-204ENST00000536782 GOLGB1Q14789 3259 aaKnown RBP27.25■■□□□ 1.95
TNFRSF1B-204ENST00000536782 PPM1GO15355 546 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF1B-204ENST00000536782 POLR3GLQ9BT43 218 aa27.22■■□□□ 1.95
TNFRSF1B-204ENST00000536782 TAF1LQ8IZX4 1826 aa27.21■■□□□ 1.95
TNFRSF1B-204ENST00000536782 POLD1P28340 1107 aa27.21■■□□□ 1.95
TNFRSF1B-204ENST00000536782 ITGB4P16144 1822 aa27.2■■□□□ 1.95
TNFRSF1B-204ENST00000536782 CYP27B1O15528 508 aa27.2■■□□□ 1.94
TNFRSF1B-204ENST00000536782 WASHC2AQ641Q2 1341 aa27.19■■□□□ 1.94
TNFRSF1B-204ENST00000536782 TOGARAM1Q9Y4F4 1720 aa27.19■■□□□ 1.94
TNFRSF1B-204ENST00000536782 ANKRD26Q9UPS8 1709 aa27.19■■□□□ 1.94
TNFRSF1B-204ENST00000536782 MAP2P11137 1827 aaKnown RBP27.18■■□□□ 1.94
TNFRSF1B-204ENST00000536782 C5P01031 1676 aa27.17■■□□□ 1.94
TNFRSF1B-204ENST00000536782 PKD1L3Q7Z443 1732 aa27.17■■□□□ 1.94
TNFRSF1B-204ENST00000536782 MPRIPQ6WCQ1 1025 aa27.17■■□□□ 1.94
TNFRSF1B-204ENST00000536782 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
TNFRSF1B-204ENST00000536782 HMGB2P26583 209 aaKnown RBP27.16■■□□□ 1.94
TNFRSF1B-204ENST00000536782 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.94
TNFRSF1B-204ENST00000536782 ZNF784Q8NCA9 323 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF1B-204ENST00000536782 KLHL34Q8N239 644 aa27.15■■□□□ 1.94
TNFRSF1B-204ENST00000536782 POLKQ9UBT6 870 aa27.15■■□□□ 1.94
TNFRSF1B-204ENST00000536782 SPG7Q9UQ90 795 aa27.15■■□□□ 1.94
TNFRSF1B-204ENST00000536782 PALLDQ8WX93 1383 aa27.14■■□□□ 1.94
TNFRSF1B-204ENST00000536782 MSH5O43196 834 aa27.14■■□□□ 1.94
TNFRSF1B-204ENST00000536782 EYA1Q99502 592 aa27.14■■□□□ 1.94
TNFRSF1B-204ENST00000536782 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
TNFRSF1B-204ENST00000536782 COL23A1Q86Y22 540 aaPredicted RBP27.12■■□□□ 1.93
TNFRSF1B-204ENST00000536782 SMARCC1Q92922 1105 aaPredicted RBP27.12■■□□□ 1.93
TNFRSF1B-204ENST00000536782 NKX1-1Q15270 411 aaPredicted RBP27.11■■□□□ 1.93
TNFRSF1B-204ENST00000536782 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF1B-204ENST00000536782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.1■■□□□ 1.93
TNFRSF1B-204ENST00000536782 GPR162Q16538 588 aa27.09■■□□□ 1.93
TNFRSF1B-204ENST00000536782 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF1B-204ENST00000536782 PIGBQ92521 554 aa27.08■■□□□ 1.93
TNFRSF1B-204ENST00000536782 FLAD1Q8NFF5 587 aa27.07■■□□□ 1.92
TNFRSF1B-204ENST00000536782 NLGN2Q8NFZ4 835 aa27.07■■□□□ 1.92
TNFRSF1B-204ENST00000536782 PANK3Q9H999 370 aa27.07■■□□□ 1.92
TNFRSF1B-204ENST00000536782 EIF4A2Q14240 407 aaKnown RBP27.06■■□□□ 1.92
TNFRSF1B-204ENST00000536782 UBR3Q6ZT12 1888 aa27.06■■□□□ 1.92
TNFRSF1B-204ENST00000536782 IFNL2Q8IZJ0 200 aa27.05■■□□□ 1.92
TNFRSF1B-204ENST00000536782 C4BP0C0L5 1744 aa27.04■■□□□ 1.92
TNFRSF1B-204ENST00000536782 PHKG2P15735 406 aa27.03■■□□□ 1.92
TNFRSF1B-204ENST00000536782 MSL1Q68DK7 614 aa27.03■■□□□ 1.92
TNFRSF1B-204ENST00000536782 TMOD3Q9NYL9 352 aa27.03■■□□□ 1.92
TNFRSF1B-204ENST00000536782 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
TNFRSF1B-204ENST00000536782 AK7Q96M32 723 aa27.02■■□□□ 1.92
TNFRSF1B-204ENST00000536782 PLEKHG2Q9H7P9 1386 aa27■■□□□ 1.91
TNFRSF1B-204ENST00000536782 AMIGO3Q86WK7 504 aa27■■□□□ 1.91
TNFRSF1B-204ENST00000536782 IGSF1Q8N6C5 1336 aa26.98■■□□□ 1.91
TNFRSF1B-204ENST00000536782 LOC102724428A0A0B4J2F2 783 aa26.98■■□□□ 1.91
TNFRSF1B-204ENST00000536782 SIK1P57059 783 aa26.98■■□□□ 1.91
TNFRSF1B-204ENST00000536782 ASAP1Q9ULH1 1129 aa26.97■■□□□ 1.91
TNFRSF1B-204ENST00000536782 YBX3P16989 372 aaKnown RBP eCLIP26.96■■□□□ 1.91
TNFRSF1B-204ENST00000536782 MORC1Q86VD1 984 aa26.96■■□□□ 1.91
TNFRSF1B-204ENST00000536782 PHF14O94880 888 aa26.95■■□□□ 1.9
TNFRSF1B-204ENST00000536782 LINC00116Q8NCU8 138 aa26.94■■□□□ 1.9
TNFRSF1B-204ENST00000536782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 SSFA2P28290 1259 aa26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 ATP6V1AP38606 617 aa26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 SMIM5Q71RC9 77 aa26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 KNSTRNQ9Y448 316 aa26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 CD2APQ9Y5K6 639 aa26.93■■□□□ 1.9
TNFRSF1B-204ENST00000536782 PLEKHO1Q53GL0 409 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms