RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 PANK3Q9H999 370 aa20.63■□□□□ 0.89
UBC-204ENST00000536661 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
UBC-204ENST00000536661 DDX54Q8TDD1 881 aaKnown RBP20.62■□□□□ 0.89
UBC-204ENST00000536661 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
UBC-204ENST00000536661 PKD1L3Q7Z443 1732 aa20.61■□□□□ 0.89
UBC-204ENST00000536661 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
UBC-204ENST00000536661 PPM1GO15355 546 aaPredicted RBP20.6■□□□□ 0.89
UBC-204ENST00000536661 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
UBC-204ENST00000536661 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
UBC-204ENST00000536661 NCAPD2Q15021 1401 aa20.59■□□□□ 0.89
UBC-204ENST00000536661 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
UBC-204ENST00000536661 NSD2O96028 1365 aa20.58■□□□□ 0.88
UBC-204ENST00000536661 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
UBC-204ENST00000536661 WASHC2AQ641Q2 1341 aa20.57■□□□□ 0.88
UBC-204ENST00000536661 LY75O60449 1722 aa20.57■□□□□ 0.88
UBC-204ENST00000536661 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
UBC-204ENST00000536661 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
UBC-204ENST00000536661 PDGFDQ9GZP0 370 aaPredicted RBP20.56■□□□□ 0.88
UBC-204ENST00000536661 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
UBC-204ENST00000536661 TATP17735 454 aaPredicted RBP20.55■□□□□ 0.88
UBC-204ENST00000536661 ITGB4P16144 1822 aa20.53■□□□□ 0.88
UBC-204ENST00000536661 SYTL4Q96C24 671 aaPredicted RBP20.52■□□□□ 0.88
UBC-204ENST00000536661 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
UBC-204ENST00000536661 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
UBC-204ENST00000536661 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
UBC-204ENST00000536661 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
UBC-204ENST00000536661 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
UBC-204ENST00000536661 EYA1Q99502 592 aa20.5■□□□□ 0.87
UBC-204ENST00000536661 SPON1Q9HCB6 807 aa20.5■□□□□ 0.87
UBC-204ENST00000536661 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
UBC-204ENST00000536661 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
UBC-204ENST00000536661 SLC15A2Q16348 729 aa20.49■□□□□ 0.87
UBC-204ENST00000536661 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
UBC-204ENST00000536661 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
UBC-204ENST00000536661 LRRC4BQ9NT99 713 aa20.48■□□□□ 0.87
UBC-204ENST00000536661 CYP27B1O15528 508 aa20.47■□□□□ 0.87
UBC-204ENST00000536661 AMER1Q5JTC6 1135 aaPredicted RBP20.46■□□□□ 0.87
UBC-204ENST00000536661 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
UBC-204ENST00000536661 ZNF827Q17R98 1081 aa20.45■□□□□ 0.86
UBC-204ENST00000536661 TAF1LQ8IZX4 1826 aa20.44■□□□□ 0.86
UBC-204ENST00000536661 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
UBC-204ENST00000536661 C5P01031 1676 aa20.44■□□□□ 0.86
UBC-204ENST00000536661 PTGER2P43116 358 aa20.43■□□□□ 0.86
UBC-204ENST00000536661 SLC27A3Q5K4L6 730 aa20.43■□□□□ 0.86
UBC-204ENST00000536661 KCNQ4P56696 695 aa20.42■□□□□ 0.86
UBC-204ENST00000536661 SPG7Q9UQ90 795 aa20.42■□□□□ 0.86
UBC-204ENST00000536661 PER1O15534 1290 aaPredicted RBP20.41■□□□□ 0.86
UBC-204ENST00000536661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
UBC-204ENST00000536661 PPP1R1BQ9UD71 204 aaPredicted RBP20.41■□□□□ 0.86
UBC-204ENST00000536661 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
UBC-204ENST00000536661 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
UBC-204ENST00000536661 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
UBC-204ENST00000536661 NKX1-1Q15270 411 aaPredicted RBP20.39■□□□□ 0.85
UBC-204ENST00000536661 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
UBC-204ENST00000536661 SGIP1Q9BQI5 828 aa20.38■□□□□ 0.85
UBC-204ENST00000536661 CCNL1Q9UK58 526 aaPredicted RBP20.38■□□□□ 0.85
UBC-204ENST00000536661 COL24A1Q17RW2 1714 aa20.38■□□□□ 0.85
UBC-204ENST00000536661 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
UBC-204ENST00000536661 PHKG2P15735 406 aa20.37■□□□□ 0.85
UBC-204ENST00000536661 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
UBC-204ENST00000536661 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
UBC-204ENST00000536661 MTFR1LQ9H019 292 aa20.36■□□□□ 0.85
UBC-204ENST00000536661 AEBP1Q8IUX7 1158 aa20.35■□□□□ 0.85
UBC-204ENST00000536661 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
UBC-204ENST00000536661 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
UBC-204ENST00000536661 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
UBC-204ENST00000536661 IL13P35225 146 aa20.34■□□□□ 0.85
UBC-204ENST00000536661 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
UBC-204ENST00000536661 KDRP35968 1356 aa20.34■□□□□ 0.85
UBC-204ENST00000536661 MTHFSP49914 203 aa20.33■□□□□ 0.85
UBC-204ENST00000536661 PIGBQ92521 554 aa20.33■□□□□ 0.85
UBC-204ENST00000536661 SCN11AQ9UI33 1791 aa20.31■□□□□ 0.84
UBC-204ENST00000536661 UBR3Q6ZT12 1888 aa20.31■□□□□ 0.84
UBC-204ENST00000536661 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
UBC-204ENST00000536661 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
UBC-204ENST00000536661 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
UBC-204ENST00000536661 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
UBC-204ENST00000536661 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
UBC-204ENST00000536661 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
UBC-204ENST00000536661 COL3A1P02461 1466 aaPredicted RBP20.3■□□□□ 0.84
UBC-204ENST00000536661 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
UBC-204ENST00000536661 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
UBC-204ENST00000536661 FHDC1Q9C0D6 1143 aaPredicted RBP20.29■□□□□ 0.84
UBC-204ENST00000536661 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
UBC-204ENST00000536661 SLC16A10Q8TF71 515 aa20.27■□□□□ 0.84
UBC-204ENST00000536661 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
UBC-204ENST00000536661 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
UBC-204ENST00000536661 UTRNP46939 3433 aa20.26■□□□□ 0.83
UBC-204ENST00000536661 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
UBC-204ENST00000536661 ASAP1Q9ULH1 1129 aa20.26■□□□□ 0.83
UBC-204ENST00000536661 COL5A3P25940 1745 aaPredicted RBP20.25■□□□□ 0.83
UBC-204ENST00000536661 DCAF5Q96JK2 942 aa20.25■□□□□ 0.83
UBC-204ENST00000536661 ARXQ96QS3 562 aa20.25■□□□□ 0.83
UBC-204ENST00000536661 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
UBC-204ENST00000536661 ERVV-2B6SEH9 535 aa20.24■□□□□ 0.83
UBC-204ENST00000536661 DIAPH1O60610 1272 aaKnown RBP20.24■□□□□ 0.83
UBC-204ENST00000536661 SIK1P57059 783 aa20.24■□□□□ 0.83
UBC-204ENST00000536661 COL23A1Q86Y22 540 aaPredicted RBP20.24■□□□□ 0.83
UBC-204ENST00000536661 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
UBC-204ENST00000536661 HMOX1P09601 288 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms