RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
RTN3P1-201ENST00000536295 STK32BQ9NY57 414 aa19.71■□□□□ 0.75
RTN3P1-201ENST00000536295 KAT6BQ8WYB5 2073 aa19.71■□□□□ 0.75
RTN3P1-201ENST00000536295 BTAF1O14981 1849 aa19.7■□□□□ 0.74
RTN3P1-201ENST00000536295 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
RTN3P1-201ENST00000536295 PANK3Q9H999 370 aa19.7■□□□□ 0.74
RTN3P1-201ENST00000536295 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
RTN3P1-201ENST00000536295 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
RTN3P1-201ENST00000536295 PDGFDQ9GZP0 370 aaPredicted RBP19.68■□□□□ 0.74
RTN3P1-201ENST00000536295 SPON1Q9HCB6 807 aa19.68■□□□□ 0.74
RTN3P1-201ENST00000536295 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
RTN3P1-201ENST00000536295 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
RTN3P1-201ENST00000536295 DOT1LQ8TEK3 1739 aa19.66■□□□□ 0.74
RTN3P1-201ENST00000536295 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
RTN3P1-201ENST00000536295 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
RTN3P1-201ENST00000536295 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
RTN3P1-201ENST00000536295 ZBTB7AO95365 584 aa19.64■□□□□ 0.73
RTN3P1-201ENST00000536295 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 PCDH11XQ9BZA7 1347 aa19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 PCDH11YQ9BZA8 1340 aa19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 LRRC4BQ9NT99 713 aa19.63■□□□□ 0.73
RTN3P1-201ENST00000536295 NSD2O96028 1365 aa19.61■□□□□ 0.73
RTN3P1-201ENST00000536295 KCNQ4P56696 695 aa19.61■□□□□ 0.73
RTN3P1-201ENST00000536295 EYA1Q99502 592 aa19.61■□□□□ 0.73
RTN3P1-201ENST00000536295 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
RTN3P1-201ENST00000536295 PAPPAQ13219 1627 aa19.61■□□□□ 0.73
RTN3P1-201ENST00000536295 ZNF827Q17R98 1081 aa19.6■□□□□ 0.73
RTN3P1-201ENST00000536295 CYP27B1O15528 508 aa19.59■□□□□ 0.73
RTN3P1-201ENST00000536295 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
RTN3P1-201ENST00000536295 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
RTN3P1-201ENST00000536295 KNSTRNQ9Y448 316 aa19.59■□□□□ 0.73
RTN3P1-201ENST00000536295 KIF7Q2M1P5 1343 aa19.58■□□□□ 0.73
RTN3P1-201ENST00000536295 EIF4A2Q14240 407 aaKnown RBP19.58■□□□□ 0.72
RTN3P1-201ENST00000536295 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
RTN3P1-201ENST00000536295 CCNL1Q9UK58 526 aaPredicted RBP19.56■□□□□ 0.72
RTN3P1-201ENST00000536295 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
RTN3P1-201ENST00000536295 PTGER2P43116 358 aa19.55■□□□□ 0.72
RTN3P1-201ENST00000536295 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
RTN3P1-201ENST00000536295 PKD1L3Q7Z443 1732 aa19.55■□□□□ 0.72
RTN3P1-201ENST00000536295 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
RTN3P1-201ENST00000536295 MTFR1LQ9H019 292 aa19.55■□□□□ 0.72
RTN3P1-201ENST00000536295 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
RTN3P1-201ENST00000536295 LY75O60449 1722 aa19.53■□□□□ 0.72
RTN3P1-201ENST00000536295 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
RTN3P1-201ENST00000536295 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
RTN3P1-201ENST00000536295 PALLDQ8WX93 1383 aa19.5■□□□□ 0.71
RTN3P1-201ENST00000536295 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
RTN3P1-201ENST00000536295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
RTN3P1-201ENST00000536295 PNPLA7Q6ZV29 1317 aa19.5■□□□□ 0.71
RTN3P1-201ENST00000536295 NKX1-1Q15270 411 aaPredicted RBP19.49■□□□□ 0.71
RTN3P1-201ENST00000536295 PHKG2P15735 406 aa19.48■□□□□ 0.71
RTN3P1-201ENST00000536295 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
RTN3P1-201ENST00000536295 PIGBQ92521 554 aa19.48■□□□□ 0.71
RTN3P1-201ENST00000536295 SGIP1Q9BQI5 828 aa19.48■□□□□ 0.71
RTN3P1-201ENST00000536295 ITGB4P16144 1822 aa19.47■□□□□ 0.71
RTN3P1-201ENST00000536295 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
RTN3P1-201ENST00000536295 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 MSH5O43196 834 aa19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 TUBGCP6Q96RT7 1819 aa19.46■□□□□ 0.71
RTN3P1-201ENST00000536295 AEBP1Q8IUX7 1158 aa19.45■□□□□ 0.7
RTN3P1-201ENST00000536295 ARXQ96QS3 562 aa19.45■□□□□ 0.7
RTN3P1-201ENST00000536295 QSER1Q2KHR3 1735 aa19.45■□□□□ 0.7
RTN3P1-201ENST00000536295 PLEKHO1Q53GL0 409 aaPredicted RBP19.44■□□□□ 0.7
RTN3P1-201ENST00000536295 SLC16A10Q8TF71 515 aa19.44■□□□□ 0.7
RTN3P1-201ENST00000536295 C5P01031 1676 aa19.43■□□□□ 0.7
RTN3P1-201ENST00000536295 PER1O15534 1290 aaPredicted RBP19.43■□□□□ 0.7
RTN3P1-201ENST00000536295 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
RTN3P1-201ENST00000536295 SYT17Q9BSW7 474 aa19.43■□□□□ 0.7
RTN3P1-201ENST00000536295 POLD1P28340 1107 aa19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 IL13P35225 146 aa19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 MTHFSP49914 203 aa19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
RTN3P1-201ENST00000536295 PLEKHG2Q9H7P9 1386 aa19.41■□□□□ 0.7
RTN3P1-201ENST00000536295 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
RTN3P1-201ENST00000536295 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.69
RTN3P1-201ENST00000536295 HSP90AB1P08238 724 aaKnown RBP19.39■□□□□ 0.69
RTN3P1-201ENST00000536295 SIK1P57059 783 aa19.39■□□□□ 0.69
RTN3P1-201ENST00000536295 AK7Q96M32 723 aa19.39■□□□□ 0.69
RTN3P1-201ENST00000536295 TAF1LQ8IZX4 1826 aa19.39■□□□□ 0.69
RTN3P1-201ENST00000536295 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
RTN3P1-201ENST00000536295 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
RTN3P1-201ENST00000536295 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
RTN3P1-201ENST00000536295 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
RTN3P1-201ENST00000536295 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
RTN3P1-201ENST00000536295 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
RTN3P1-201ENST00000536295 PHF14O94880 888 aa19.37■□□□□ 0.69
RTN3P1-201ENST00000536295 KDM6AO15550 1401 aaPredicted RBP19.36■□□□□ 0.69
RTN3P1-201ENST00000536295 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
RTN3P1-201ENST00000536295 YY1P25490 414 aa19.36■□□□□ 0.69
RTN3P1-201ENST00000536295 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
RTN3P1-201ENST00000536295 SMIM5Q71RC9 77 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms