RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 INSRP06213 1382 aa21.33■■□□□ 1.01
PAAF1-207ENST00000536003 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1
PAAF1-207ENST00000536003 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1
PAAF1-207ENST00000536003 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
PAAF1-207ENST00000536003 KIF24Q5T7B8 1368 aa21.3■■□□□ 1
PAAF1-207ENST00000536003 PKD1L3Q7Z443 1732 aa21.3■■□□□ 1
PAAF1-207ENST00000536003 LY75O60449 1722 aa21.29■■□□□ 1
PAAF1-207ENST00000536003 NSD2O96028 1365 aa21.29■■□□□ 1
PAAF1-207ENST00000536003 TOGARAM1Q9Y4F4 1720 aa21.28■■□□□ 1
PAAF1-207ENST00000536003 TUBGCP6Q96RT7 1819 aa21.28■■□□□ 1
PAAF1-207ENST00000536003 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
PAAF1-207ENST00000536003 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
PAAF1-207ENST00000536003 ZCRB1Q8TBF4 217 aaKnown RBP21.26■□□□□ 0.99
PAAF1-207ENST00000536003 UTRNP46939 3433 aa21.24■□□□□ 0.99
PAAF1-207ENST00000536003 PPM1GO15355 546 aaPredicted RBP21.24■□□□□ 0.99
PAAF1-207ENST00000536003 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
PAAF1-207ENST00000536003 SPON1Q9HCB6 807 aa21.24■□□□□ 0.99
PAAF1-207ENST00000536003 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
PAAF1-207ENST00000536003 STK32BQ9NY57 414 aa21.23■□□□□ 0.99
PAAF1-207ENST00000536003 QSER1Q2KHR3 1735 aa21.23■□□□□ 0.99
PAAF1-207ENST00000536003 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
PAAF1-207ENST00000536003 ITGB4P16144 1822 aa21.22■□□□□ 0.99
PAAF1-207ENST00000536003 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
PAAF1-207ENST00000536003 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
PAAF1-207ENST00000536003 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
PAAF1-207ENST00000536003 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
PAAF1-207ENST00000536003 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
PAAF1-207ENST00000536003 PANK3Q9H999 370 aa21.21■□□□□ 0.99
PAAF1-207ENST00000536003 WASHC2AQ641Q2 1341 aa21.2■□□□□ 0.98
PAAF1-207ENST00000536003 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
PAAF1-207ENST00000536003 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
PAAF1-207ENST00000536003 KCNQ4P56696 695 aa21.19■□□□□ 0.98
PAAF1-207ENST00000536003 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
PAAF1-207ENST00000536003 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
PAAF1-207ENST00000536003 CYP27B1O15528 508 aa21.17■□□□□ 0.98
PAAF1-207ENST00000536003 PTGER2P43116 358 aa21.17■□□□□ 0.98
PAAF1-207ENST00000536003 PPP1R1BQ9UD71 204 aaPredicted RBP21.17■□□□□ 0.98
PAAF1-207ENST00000536003 C5P01031 1676 aa21.17■□□□□ 0.98
PAAF1-207ENST00000536003 TAF1LQ8IZX4 1826 aa21.15■□□□□ 0.98
PAAF1-207ENST00000536003 EYA1Q99502 592 aa21.15■□□□□ 0.98
PAAF1-207ENST00000536003 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
PAAF1-207ENST00000536003 GOLGB1Q14789 3259 aaKnown RBP21.14■□□□□ 0.97
PAAF1-207ENST00000536003 AKT1S1Q96B36 256 aa21.14■□□□□ 0.97
PAAF1-207ENST00000536003 KIF7Q2M1P5 1343 aa21.13■□□□□ 0.97
PAAF1-207ENST00000536003 EIF4A2Q14240 407 aaKnown RBP21.13■□□□□ 0.97
PAAF1-207ENST00000536003 SLC27A3Q5K4L6 730 aa21.13■□□□□ 0.97
PAAF1-207ENST00000536003 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
PAAF1-207ENST00000536003 SGIP1Q9BQI5 828 aa21.11■□□□□ 0.97
PAAF1-207ENST00000536003 MTFR1LQ9H019 292 aa21.11■□□□□ 0.97
PAAF1-207ENST00000536003 PNPLA7Q6ZV29 1317 aa21.09■□□□□ 0.97
PAAF1-207ENST00000536003 CCNL1Q9UK58 526 aaPredicted RBP21.09■□□□□ 0.97
PAAF1-207ENST00000536003 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
PAAF1-207ENST00000536003 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
PAAF1-207ENST00000536003 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
PAAF1-207ENST00000536003 C4BP0C0L5 1744 aa21.06■□□□□ 0.96
PAAF1-207ENST00000536003 AMER1Q5JTC6 1135 aaPredicted RBP21.05■□□□□ 0.96
PAAF1-207ENST00000536003 MORC1Q86VD1 984 aa21.05■□□□□ 0.96
PAAF1-207ENST00000536003 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
PAAF1-207ENST00000536003 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
PAAF1-207ENST00000536003 TFCP2L1Q9NZI6 479 aa21.04■□□□□ 0.96
PAAF1-207ENST00000536003 KNSTRNQ9Y448 316 aa21.04■□□□□ 0.96
PAAF1-207ENST00000536003 FHDC1Q9C0D6 1143 aaPredicted RBP21.04■□□□□ 0.96
PAAF1-207ENST00000536003 PHKG2P15735 406 aa21.03■□□□□ 0.96
PAAF1-207ENST00000536003 PIGBQ92521 554 aa21.03■□□□□ 0.96
PAAF1-207ENST00000536003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
PAAF1-207ENST00000536003 UBR3Q6ZT12 1888 aa21.03■□□□□ 0.96
PAAF1-207ENST00000536003 AEBP1Q8IUX7 1158 aa21.01■□□□□ 0.95
PAAF1-207ENST00000536003 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
PAAF1-207ENST00000536003 SYT17Q9BSW7 474 aa21■□□□□ 0.95
PAAF1-207ENST00000536003 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
PAAF1-207ENST00000536003 ARXQ96QS3 562 aa20.99■□□□□ 0.95
PAAF1-207ENST00000536003 KDM6AO15550 1401 aaPredicted RBP20.98■□□□□ 0.95
PAAF1-207ENST00000536003 PER1O15534 1290 aaPredicted RBP20.98■□□□□ 0.95
PAAF1-207ENST00000536003 AMIGO3Q86WK7 504 aa20.97■□□□□ 0.95
PAAF1-207ENST00000536003 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
PAAF1-207ENST00000536003 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
PAAF1-207ENST00000536003 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
PAAF1-207ENST00000536003 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
PAAF1-207ENST00000536003 KDRP35968 1356 aa20.96■□□□□ 0.95
PAAF1-207ENST00000536003 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
PAAF1-207ENST00000536003 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
PAAF1-207ENST00000536003 IL13P35225 146 aa20.95■□□□□ 0.94
PAAF1-207ENST00000536003 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
PAAF1-207ENST00000536003 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
PAAF1-207ENST00000536003 CC2D1BQ5T0F9 858 aaKnown RBP20.94■□□□□ 0.94
PAAF1-207ENST00000536003 SMARCC1Q92922 1105 aaPredicted RBP20.94■□□□□ 0.94
PAAF1-207ENST00000536003 SMIM5Q71RC9 77 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 LOC102724428A0A0B4J2F2 783 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 MSH5O43196 834 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 SIK1P57059 783 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 MSL1Q68DK7 614 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 SULT6B1Q6IMI4 303 aa20.93■□□□□ 0.94
PAAF1-207ENST00000536003 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
PAAF1-207ENST00000536003 LINC00116Q8NCU8 138 aa20.92■□□□□ 0.94
PAAF1-207ENST00000536003 POLD1P28340 1107 aa20.91■□□□□ 0.94
PAAF1-207ENST00000536003 MTHFSP49914 203 aa20.91■□□□□ 0.94
PAAF1-207ENST00000536003 ITPK1Q13572 414 aa20.91■□□□□ 0.94
PAAF1-207ENST00000536003 ATG3Q9NT62 314 aa20.91■□□□□ 0.94
PAAF1-207ENST00000536003 COL3A1P02461 1466 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms