RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MSH5O43196 834 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
COL21A1-212ENST00000535941 MAPK8IP3Q9UPT6 1336 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 EXOC6Q8TAG9 804 aa10.4□□□□□ -0.74
COL21A1-212ENST00000535941 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
COL21A1-212ENST00000535941 ITGB4P16144 1822 aa10.4□□□□□ -0.74
COL21A1-212ENST00000535941 NLRP6P59044 892 aa10.4□□□□□ -0.74
COL21A1-212ENST00000535941 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
COL21A1-212ENST00000535941 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
COL21A1-212ENST00000535941 ZNF335Q9H4Z2 1342 aaPredicted RBP10.4□□□□□ -0.75
COL21A1-212ENST00000535941 BCAR3O75815 825 aa10.4□□□□□ -0.75
COL21A1-212ENST00000535941 AAMPQ13685 434 aa10.4□□□□□ -0.75
COL21A1-212ENST00000535941 BRINP3Q76B58 766 aa10.4□□□□□ -0.75
COL21A1-212ENST00000535941 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 HEG1Q9ULI3 1381 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 CHL1O00533 1208 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 LMOD3Q0VAK6 560 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 BABAM1Q9NWV8 329 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 ZNF831Q5JPB2 1677 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 RREB1Q92766 1687 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
COL21A1-212ENST00000535941 NPHP3Q7Z494 1330 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 HMOX1P09601 288 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 KRT28Q7Z3Y7 464 aa10.39□□□□□ -0.75
COL21A1-212ENST00000535941 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
COL21A1-212ENST00000535941 MAP3K5Q99683 1374 aa10.38□□□□□ -0.75
COL21A1-212ENST00000535941 MEGF6O75095 1541 aa10.38□□□□□ -0.75
COL21A1-212ENST00000535941 GCP02774 474 aa10.38□□□□□ -0.75
COL21A1-212ENST00000535941 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
COL21A1-212ENST00000535941 SULT6B1Q6IMI4 303 aa10.38□□□□□ -0.75
COL21A1-212ENST00000535941 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
COL21A1-212ENST00000535941 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
COL21A1-212ENST00000535941 PLIN1O60240 522 aa10.37□□□□□ -0.75
COL21A1-212ENST00000535941 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
COL21A1-212ENST00000535941 VAMP4O75379 141 aa10.37□□□□□ -0.75
COL21A1-212ENST00000535941 IBTKQ9P2D0 1353 aaPredicted RBP10.37□□□□□ -0.75
COL21A1-212ENST00000535941 ERBB3P21860 1342 aa10.36□□□□□ -0.75
COL21A1-212ENST00000535941 GNAI1P63096 354 aa10.36□□□□□ -0.75
COL21A1-212ENST00000535941 PSME1Q06323 249 aa10.36□□□□□ -0.75
COL21A1-212ENST00000535941 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
COL21A1-212ENST00000535941 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
COL21A1-212ENST00000535941 EXOSC9Q06265 439 aaKnown RBP10.35□□□□□ -0.75
COL21A1-212ENST00000535941 ABCC4O15439 1325 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 DISP2A7MBM2 1401 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 FOXO3O43524 673 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 ATF3P18847 181 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 NBPF6Q5VWK0 638 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
COL21A1-212ENST00000535941 NBPF4Q96M43 638 aa10.35□□□□□ -0.75
COL21A1-212ENST00000535941 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
COL21A1-212ENST00000535941 RLBP1P12271 317 aa10.34□□□□□ -0.75
COL21A1-212ENST00000535941 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.34□□□□□ -0.75
COL21A1-212ENST00000535941 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
COL21A1-212ENST00000535941 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
COL21A1-212ENST00000535941 SSH1Q8WYL5 1049 aa10.34□□□□□ -0.75
COL21A1-212ENST00000535941 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
COL21A1-212ENST00000535941 KCPQ6ZWJ8 1503 aa10.33□□□□□ -0.76
COL21A1-212ENST00000535941 TJP1Q07157 1748 aa10.33□□□□□ -0.76
COL21A1-212ENST00000535941 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-212ENST00000535941 AMPHP49418 695 aa10.32□□□□□ -0.76
COL21A1-212ENST00000535941 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
COL21A1-212ENST00000535941 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
COL21A1-212ENST00000535941 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
COL21A1-212ENST00000535941 TSPYL6Q8N831 410 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 TRIM27P14373 513 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 THUMPD2Q9BTF0 503 aaKnown RBP10.31□□□□□ -0.76
COL21A1-212ENST00000535941 NUTM2GQ5VZR2 741 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 IL17REQ8NFR9 667 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL21A1-212ENST00000535941 TNNQ9UQP3 1299 aa10.31□□□□□ -0.76
COL21A1-212ENST00000535941 DOT1LQ8TEK3 1739 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 MVPQ14764 893 aaKnown RBP10.3□□□□□ -0.76
COL21A1-212ENST00000535941 ANKRD36CQ5JPF3 1778 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
COL21A1-212ENST00000535941 THSD7AQ9UPZ6 1657 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 TNS2Q63HR2 1409 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 NBR1Q14596 966 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 ATP10DQ9P241 1426 aa10.3□□□□□ -0.76
COL21A1-212ENST00000535941 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
COL21A1-212ENST00000535941 AFDNP55196 1824 aaKnown RBP10.29□□□□□ -0.76
COL21A1-212ENST00000535941 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
COL21A1-212ENST00000535941 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
COL21A1-212ENST00000535941 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
COL21A1-212ENST00000535941 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-212ENST00000535941 DDX17Q92841 729 aaKnown RBP10.29□□□□□ -0.76
COL21A1-212ENST00000535941 CASZ1Q86V15 1759 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-212ENST00000535941 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 MCM10Q7L590 875 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 AMOTQ4VCS5 1084 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
COL21A1-212ENST00000535941 HOXB7P09629 217 aa10.27□□□□□ -0.77
COL21A1-212ENST00000535941 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
COL21A1-212ENST00000535941 PANK1Q8TE04 598 aa10.27□□□□□ -0.77
COL21A1-212ENST00000535941 ZBTB40Q9NUA8 1239 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms