RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 IL2RBP14784 551 aa21.47■■□□□ 1.03
VAMP1-205ENST00000535927 PLEKHO1Q53GL0 409 aaPredicted RBP21.47■■□□□ 1.03
VAMP1-205ENST00000535927 ATRNO75882 1429 aa21.46■■□□□ 1.03
VAMP1-205ENST00000535927 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
VAMP1-205ENST00000535927 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
VAMP1-205ENST00000535927 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
VAMP1-205ENST00000535927 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
VAMP1-205ENST00000535927 CCDC9Q9Y3X0 531 aaKnown RBP21.45■■□□□ 1.02
VAMP1-205ENST00000535927 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
VAMP1-205ENST00000535927 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
VAMP1-205ENST00000535927 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
VAMP1-205ENST00000535927 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
VAMP1-205ENST00000535927 USHBP1Q8N6Y0 703 aa21.41■■□□□ 1.02
VAMP1-205ENST00000535927 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
VAMP1-205ENST00000535927 DISP2A7MBM2 1401 aa21.4■■□□□ 1.02
VAMP1-205ENST00000535927 LMOD3Q0VAK6 560 aa21.4■■□□□ 1.02
VAMP1-205ENST00000535927 EXOC5O00471 708 aa21.39■■□□□ 1.01
VAMP1-205ENST00000535927 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
VAMP1-205ENST00000535927 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
VAMP1-205ENST00000535927 ZCRB1Q8TBF4 217 aaKnown RBP21.39■■□□□ 1.01
VAMP1-205ENST00000535927 USP35Q9P2H5 1018 aa21.39■■□□□ 1.01
VAMP1-205ENST00000535927 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
VAMP1-205ENST00000535927 WNK3Q9BYP7 1800 aa21.37■■□□□ 1.01
VAMP1-205ENST00000535927 APAF1O14727 1248 aa21.37■■□□□ 1.01
VAMP1-205ENST00000535927 TMPOP42166 694 aaKnown RBP21.37■■□□□ 1.01
VAMP1-205ENST00000535927 PHACTR3Q96KR7 559 aa21.37■■□□□ 1.01
VAMP1-205ENST00000535927 SRCAPQ6ZRS2 3230 aa21.37■■□□□ 1.01
VAMP1-205ENST00000535927 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
VAMP1-205ENST00000535927 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
VAMP1-205ENST00000535927 PKD1L3Q7Z443 1732 aa21.36■■□□□ 1.01
VAMP1-205ENST00000535927 AKAP4Q5JQC9 854 aa21.36■■□□□ 1.01
VAMP1-205ENST00000535927 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
VAMP1-205ENST00000535927 MEGF6O75095 1541 aa21.35■■□□□ 1.01
VAMP1-205ENST00000535927 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
VAMP1-205ENST00000535927 C1orf141Q5JVX7 400 aa21.35■■□□□ 1.01
VAMP1-205ENST00000535927 IFNL2Q8IZJ0 200 aa21.35■■□□□ 1.01
VAMP1-205ENST00000535927 DDB1Q16531 1140 aa21.34■■□□□ 1.01
VAMP1-205ENST00000535927 GNAT3A8MTJ3 354 aa21.33■■□□□ 1.01
VAMP1-205ENST00000535927 RIPK4P57078 832 aa21.33■■□□□ 1.01
VAMP1-205ENST00000535927 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1.01
VAMP1-205ENST00000535927 GLI3P10071 1580 aa21.32■■□□□ 1
VAMP1-205ENST00000535927 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
VAMP1-205ENST00000535927 FAM98CQ17RN3 349 aaKnown RBP21.32■■□□□ 1
VAMP1-205ENST00000535927 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
VAMP1-205ENST00000535927 RTF1Q92541 710 aaKnown RBP21.32■■□□□ 1
VAMP1-205ENST00000535927 TNS2Q63HR2 1409 aa21.3■■□□□ 1
VAMP1-205ENST00000535927 MAP3K5Q99683 1374 aa21.3■■□□□ 1
VAMP1-205ENST00000535927 THSD7AQ9UPZ6 1657 aa21.3■■□□□ 1
VAMP1-205ENST00000535927 PHKG2P15735 406 aa21.29■■□□□ 1
VAMP1-205ENST00000535927 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
VAMP1-205ENST00000535927 WDR63Q8IWG1 891 aa21.29■■□□□ 1
VAMP1-205ENST00000535927 DCAF5Q96JK2 942 aa21.29■■□□□ 1
VAMP1-205ENST00000535927 DLG5Q8TDM6 1919 aa21.28■■□□□ 1
VAMP1-205ENST00000535927 PDE3BQ13370 1112 aa21.28■■□□□ 1
VAMP1-205ENST00000535927 CCDC125Q86Z20 511 aa21.28■■□□□ 1
VAMP1-205ENST00000535927 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
VAMP1-205ENST00000535927 IL16Q14005 1332 aa21.27■□□□□ 0.99
VAMP1-205ENST00000535927 ZBED9Q6R2W3 1325 aa21.27■□□□□ 0.99
VAMP1-205ENST00000535927 CYP27B1O15528 508 aa21.26■□□□□ 0.99
VAMP1-205ENST00000535927 WWC1Q8IX03 1113 aa21.26■□□□□ 0.99
VAMP1-205ENST00000535927 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
VAMP1-205ENST00000535927 BCL9O00512 1426 aa21.26■□□□□ 0.99
VAMP1-205ENST00000535927 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
VAMP1-205ENST00000535927 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
VAMP1-205ENST00000535927 NEUROD2Q15784 382 aa21.24■□□□□ 0.99
VAMP1-205ENST00000535927 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
VAMP1-205ENST00000535927 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
VAMP1-205ENST00000535927 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
VAMP1-205ENST00000535927 A0A0G2JS52 829 aa21.23■□□□□ 0.99
VAMP1-205ENST00000535927 MYT1Q01538 1121 aa21.23■□□□□ 0.99
VAMP1-205ENST00000535927 SHANK3Q9BYB0 1731 aa21.23■□□□□ 0.99
VAMP1-205ENST00000535927 EP400Q96L91 3159 aa21.23■□□□□ 0.99
VAMP1-205ENST00000535927 ADAMTS7Q9UKP4 1686 aa21.22■□□□□ 0.99
VAMP1-205ENST00000535927 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
VAMP1-205ENST00000535927 RRP7AQ9Y3A4 280 aaKnown RBP21.22■□□□□ 0.99
VAMP1-205ENST00000535927 ZNF521Q96K83 1311 aa21.22■□□□□ 0.99
VAMP1-205ENST00000535927 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.99
VAMP1-205ENST00000535927 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
VAMP1-205ENST00000535927 IL17REQ8NFR9 667 aa21.2■□□□□ 0.98
VAMP1-205ENST00000535927 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
VAMP1-205ENST00000535927 MARCH10Q8NA82 808 aaPredicted RBP21.19■□□□□ 0.98
VAMP1-205ENST00000535927 GNAI1P63096 354 aa21.18■□□□□ 0.98
VAMP1-205ENST00000535927 TEFQ10587 303 aa21.18■□□□□ 0.98
VAMP1-205ENST00000535927 TAF7Q15545 349 aaPredicted RBP21.18■□□□□ 0.98
VAMP1-205ENST00000535927 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
VAMP1-205ENST00000535927 FAM196AQ6ZSG2 479 aa21.18■□□□□ 0.98
VAMP1-205ENST00000535927 VIRMAQ69YN4 1812 aaKnown RBP21.18■□□□□ 0.98
VAMP1-205ENST00000535927 E9PSI1 815 aa21.17■□□□□ 0.98
VAMP1-205ENST00000535927 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
VAMP1-205ENST00000535927 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
VAMP1-205ENST00000535927 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
VAMP1-205ENST00000535927 SLC52A2Q9HAB3 445 aa21.16■□□□□ 0.98
VAMP1-205ENST00000535927 CABP4P57796 275 aa21.15■□□□□ 0.98
VAMP1-205ENST00000535927 MCM10Q7L590 875 aa21.15■□□□□ 0.98
VAMP1-205ENST00000535927 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
VAMP1-205ENST00000535927 KAT6BQ8WYB5 2073 aa21.15■□□□□ 0.98
VAMP1-205ENST00000535927 MRC1P22897 1456 aa21.14■□□□□ 0.98
VAMP1-205ENST00000535927 KDM6AO15550 1401 aaPredicted RBP21.14■□□□□ 0.98
VAMP1-205ENST00000535927 ZNF853P0CG23 659 aa21.14■□□□□ 0.97
VAMP1-205ENST00000535927 SALL2Q9Y467 1007 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms