RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
CHFR-211ENST00000535897 IP6K1Q92551 441 aa11.37□□□□□ -0.59
CHFR-211ENST00000535897 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
CHFR-211ENST00000535897 NLGN2Q8NFZ4 835 aa11.36□□□□□ -0.59
CHFR-211ENST00000535897 COG3Q96JB2 828 aa11.36□□□□□ -0.59
CHFR-211ENST00000535897 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
CHFR-211ENST00000535897 LY75O60449 1722 aa11.35□□□□□ -0.59
CHFR-211ENST00000535897 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
CHFR-211ENST00000535897 USP47Q96K76 1375 aa11.34□□□□□ -0.59
CHFR-211ENST00000535897 HOXC9P31274 260 aa11.34□□□□□ -0.59
CHFR-211ENST00000535897 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
CHFR-211ENST00000535897 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
CHFR-211ENST00000535897 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
CHFR-211ENST00000535897 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
CHFR-211ENST00000535897 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
CHFR-211ENST00000535897 MEGF6O75095 1541 aa11.33□□□□□ -0.6
CHFR-211ENST00000535897 NSD2O96028 1365 aa11.32□□□□□ -0.6
CHFR-211ENST00000535897 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
CHFR-211ENST00000535897 FBLN1P23142 703 aa11.32□□□□□ -0.6
CHFR-211ENST00000535897 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
CHFR-211ENST00000535897 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
CHFR-211ENST00000535897 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
CHFR-211ENST00000535897 COL23A1Q86Y22 540 aaPredicted RBP11.31□□□□□ -0.6
CHFR-211ENST00000535897 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
CHFR-211ENST00000535897 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
CHFR-211ENST00000535897 C5P01031 1676 aa11.3□□□□□ -0.6
CHFR-211ENST00000535897 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHFR-211ENST00000535897 PUS7Q96PZ0 661 aaKnown RBP11.3□□□□□ -0.6
CHFR-211ENST00000535897 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
CHFR-211ENST00000535897 TATP17735 454 aaPredicted RBP11.29□□□□□ -0.6
CHFR-211ENST00000535897 RRS1Q15050 365 aaKnown RBP11.29□□□□□ -0.6
CHFR-211ENST00000535897 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
CHFR-211ENST00000535897 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
CHFR-211ENST00000535897 CGNL1Q0VF96 1302 aa11.29□□□□□ -0.6
CHFR-211ENST00000535897 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
CHFR-211ENST00000535897 MPRIPQ6WCQ1 1025 aa11.28□□□□□ -0.6
CHFR-211ENST00000535897 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
CHFR-211ENST00000535897 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
CHFR-211ENST00000535897 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
CHFR-211ENST00000535897 PCDH11XQ9BZA7 1347 aa11.27□□□□□ -0.61
CHFR-211ENST00000535897 PCDH11YQ9BZA8 1340 aa11.27□□□□□ -0.61
CHFR-211ENST00000535897 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
CHFR-211ENST00000535897 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
CHFR-211ENST00000535897 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
CHFR-211ENST00000535897 ZNF526Q8TF50 670 aaPredicted RBP11.26□□□□□ -0.61
CHFR-211ENST00000535897 AK7Q96M32 723 aa11.26□□□□□ -0.61
CHFR-211ENST00000535897 TESK2Q96S53 571 aa11.26□□□□□ -0.61
CHFR-211ENST00000535897 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
CHFR-211ENST00000535897 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
CHFR-211ENST00000535897 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
CHFR-211ENST00000535897 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
CHFR-211ENST00000535897 PHF14O94880 888 aa11.25□□□□□ -0.61
CHFR-211ENST00000535897 HSP90AB2PQ58FF8 381 aa11.25□□□□□ -0.61
CHFR-211ENST00000535897 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
CHFR-211ENST00000535897 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
CHFR-211ENST00000535897 FYB1O15117 783 aa11.24□□□□□ -0.61
CHFR-211ENST00000535897 TMF1P82094 1093 aa11.24□□□□□ -0.61
CHFR-211ENST00000535897 FLT4P35916 1363 aa11.24□□□□□ -0.61
CHFR-211ENST00000535897 ITGB4P16144 1822 aa11.23□□□□□ -0.61
CHFR-211ENST00000535897 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
CHFR-211ENST00000535897 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
CHFR-211ENST00000535897 INSRP06213 1382 aa11.23□□□□□ -0.61
CHFR-211ENST00000535897 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
CHFR-211ENST00000535897 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
CHFR-211ENST00000535897 CYP27B1O15528 508 aa11.22□□□□□ -0.61
CHFR-211ENST00000535897 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
CHFR-211ENST00000535897 NSD3Q9BZ95 1437 aa11.21□□□□□ -0.61
CHFR-211ENST00000535897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
CHFR-211ENST00000535897 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
CHFR-211ENST00000535897 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
CHFR-211ENST00000535897 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
CHFR-211ENST00000535897 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
CHFR-211ENST00000535897 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
CHFR-211ENST00000535897 ADCY9O60503 1353 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 HSPA6P17066 643 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 PIGBQ92521 554 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 TMOD3Q9NYL9 352 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
CHFR-211ENST00000535897 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CHFR-211ENST00000535897 GNPATO15228 680 aa11.18□□□□□ -0.62
CHFR-211ENST00000535897 SSFA2P28290 1259 aa11.18□□□□□ -0.62
CHFR-211ENST00000535897 SIK1P57059 783 aa11.18□□□□□ -0.62
CHFR-211ENST00000535897 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
CHFR-211ENST00000535897 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
CHFR-211ENST00000535897 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
CHFR-211ENST00000535897 MMP10P09238 476 aa11.15□□□□□ -0.62
CHFR-211ENST00000535897 ITPK1Q13572 414 aa11.15□□□□□ -0.62
CHFR-211ENST00000535897 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
CHFR-211ENST00000535897 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
CHFR-211ENST00000535897 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.63
CHFR-211ENST00000535897 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
CHFR-211ENST00000535897 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
CHFR-211ENST00000535897 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
CHFR-211ENST00000535897 N4BP2Q86UW6 1770 aaPredicted RBP11.13□□□□□ -0.63
CHFR-211ENST00000535897 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
CHFR-211ENST00000535897 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
CHFR-211ENST00000535897 PHKG2P15735 406 aa11.13□□□□□ -0.63
CHFR-211ENST00000535897 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms