RNA–Protein interactions for RNA: ENST00000535859.1

UBC-203, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-203ENST00000535859 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
UBC-203ENST00000535859 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
UBC-203ENST00000535859 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
UBC-203ENST00000535859 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
UBC-203ENST00000535859 NEFMP07197 916 aa18.44■□□□□ 0.54
UBC-203ENST00000535859 IL2RBP14784 551 aa18.44■□□□□ 0.54
UBC-203ENST00000535859 ZNF772Q68DY9 489 aaPredicted RBP18.44■□□□□ 0.54
UBC-203ENST00000535859 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
UBC-203ENST00000535859 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
UBC-203ENST00000535859 AMOTQ4VCS5 1084 aa18.43■□□□□ 0.54
UBC-203ENST00000535859 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
UBC-203ENST00000535859 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
UBC-203ENST00000535859 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
UBC-203ENST00000535859 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
UBC-203ENST00000535859 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
UBC-203ENST00000535859 NFE2L2Q16236 605 aa18.41■□□□□ 0.54
UBC-203ENST00000535859 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
UBC-203ENST00000535859 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
UBC-203ENST00000535859 APAF1O14727 1248 aa18.4■□□□□ 0.54
UBC-203ENST00000535859 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
UBC-203ENST00000535859 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
UBC-203ENST00000535859 MRC1P22897 1456 aa18.39■□□□□ 0.54
UBC-203ENST00000535859 ONECUT3O60422 494 aaPredicted RBP18.39■□□□□ 0.53
UBC-203ENST00000535859 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
UBC-203ENST00000535859 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
UBC-203ENST00000535859 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
UBC-203ENST00000535859 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
UBC-203ENST00000535859 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
UBC-203ENST00000535859 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
UBC-203ENST00000535859 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
UBC-203ENST00000535859 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
UBC-203ENST00000535859 HTATSF1O43719 755 aaKnown RBP18.37■□□□□ 0.53
UBC-203ENST00000535859 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
UBC-203ENST00000535859 ITGB4P16144 1822 aa18.36■□□□□ 0.53
UBC-203ENST00000535859 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
UBC-203ENST00000535859 DOT1LQ8TEK3 1739 aa18.36■□□□□ 0.53
UBC-203ENST00000535859 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
UBC-203ENST00000535859 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
UBC-203ENST00000535859 BCL9O00512 1426 aa18.35■□□□□ 0.53
UBC-203ENST00000535859 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
UBC-203ENST00000535859 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBC-203ENST00000535859 AKAP4Q5JQC9 854 aa18.35■□□□□ 0.53
UBC-203ENST00000535859 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
UBC-203ENST00000535859 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
UBC-203ENST00000535859 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
UBC-203ENST00000535859 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
UBC-203ENST00000535859 RGS17Q9UGC6 210 aaPredicted RBP18.34■□□□□ 0.53
UBC-203ENST00000535859 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
UBC-203ENST00000535859 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
UBC-203ENST00000535859 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
UBC-203ENST00000535859 NKX1-1Q15270 411 aaPredicted RBP18.33■□□□□ 0.52
UBC-203ENST00000535859 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
UBC-203ENST00000535859 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
UBC-203ENST00000535859 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
UBC-203ENST00000535859 CYP27B1O15528 508 aa18.32■□□□□ 0.52
UBC-203ENST00000535859 PHKG2P15735 406 aa18.32■□□□□ 0.52
UBC-203ENST00000535859 RIPK4P57078 832 aa18.32■□□□□ 0.52
UBC-203ENST00000535859 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
UBC-203ENST00000535859 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
UBC-203ENST00000535859 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
UBC-203ENST00000535859 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
UBC-203ENST00000535859 DDB1Q16531 1140 aa18.31■□□□□ 0.52
UBC-203ENST00000535859 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
UBC-203ENST00000535859 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
UBC-203ENST00000535859 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
UBC-203ENST00000535859 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
UBC-203ENST00000535859 IL16Q14005 1332 aa18.29■□□□□ 0.52
UBC-203ENST00000535859 EXOC5O00471 708 aa18.29■□□□□ 0.52
UBC-203ENST00000535859 WDR63Q8IWG1 891 aa18.29■□□□□ 0.52
UBC-203ENST00000535859 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
UBC-203ENST00000535859 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
UBC-203ENST00000535859 RGS12O14924 1447 aa18.28■□□□□ 0.52
UBC-203ENST00000535859 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
UBC-203ENST00000535859 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
UBC-203ENST00000535859 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
UBC-203ENST00000535859 RXRBP28702 533 aa18.25■□□□□ 0.51
UBC-203ENST00000535859 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
UBC-203ENST00000535859 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
UBC-203ENST00000535859 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
UBC-203ENST00000535859 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
UBC-203ENST00000535859 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
UBC-203ENST00000535859 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
UBC-203ENST00000535859 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
UBC-203ENST00000535859 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
UBC-203ENST00000535859 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
UBC-203ENST00000535859 BTAF1O14981 1849 aa18.22■□□□□ 0.51
UBC-203ENST00000535859 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
UBC-203ENST00000535859 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
UBC-203ENST00000535859 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
UBC-203ENST00000535859 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
UBC-203ENST00000535859 ZNF853P0CG23 659 aa18.21■□□□□ 0.51
UBC-203ENST00000535859 MPRIPQ6WCQ1 1025 aa18.21■□□□□ 0.51
UBC-203ENST00000535859 MCM10Q7L590 875 aa18.21■□□□□ 0.51
UBC-203ENST00000535859 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
UBC-203ENST00000535859 LAMB4A4D0S4 1761 aa18.21■□□□□ 0.51
UBC-203ENST00000535859 E9PSI1 815 aa18.2■□□□□ 0.5
UBC-203ENST00000535859 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
UBC-203ENST00000535859 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
UBC-203ENST00000535859 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
UBC-203ENST00000535859 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms