RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 USHBP1Q8N6Y0 703 aa28.74■■■□□ 2.19
LTBR-205ENST00000535739 SYTL4Q96C24 671 aaPredicted RBP28.74■■■□□ 2.19
LTBR-205ENST00000535739 PRIM1P49642 420 aaKnown RBP28.73■■■□□ 2.19
LTBR-205ENST00000535739 SGIP1Q9BQI5 828 aa28.71■■■□□ 2.19
LTBR-205ENST00000535739 HSP90AB2PQ58FF8 381 aa28.7■■■□□ 2.18
LTBR-205ENST00000535739 CARD14Q9BXL6 1004 aa28.7■■■□□ 2.18
LTBR-205ENST00000535739 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
LTBR-205ENST00000535739 SLC27A3Q5K4L6 730 aa28.69■■■□□ 2.18
LTBR-205ENST00000535739 FHDC1Q9C0D6 1143 aaPredicted RBP28.69■■■□□ 2.18
LTBR-205ENST00000535739 NSD2O96028 1365 aa28.69■■■□□ 2.18
LTBR-205ENST00000535739 KCNQ4P56696 695 aa28.68■■■□□ 2.18
LTBR-205ENST00000535739 AKT1S1Q96B36 256 aa28.68■■■□□ 2.18
LTBR-205ENST00000535739 LY75O60449 1722 aa28.68■■■□□ 2.18
LTBR-205ENST00000535739 INSRP06213 1382 aa28.67■■■□□ 2.18
LTBR-205ENST00000535739 RAPGEF4Q8WZA2 1011 aa28.67■■■□□ 2.18
LTBR-205ENST00000535739 UTRNP46939 3433 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 QSER1Q2KHR3 1735 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 SYT17Q9BSW7 474 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 TIMELESSQ9UNS1 1208 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 NSD3Q9BZ95 1437 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 TUBGCP6Q96RT7 1819 aa28.66■■■□□ 2.18
LTBR-205ENST00000535739 FLT4P35916 1363 aa28.65■■■□□ 2.18
LTBR-205ENST00000535739 CGNL1Q0VF96 1302 aa28.65■■■□□ 2.18
LTBR-205ENST00000535739 PCGF6Q9BYE7 350 aa28.64■■■□□ 2.18
LTBR-205ENST00000535739 TATP17735 454 aaPredicted RBP28.63■■■□□ 2.17
LTBR-205ENST00000535739 ARXQ96QS3 562 aa28.63■■■□□ 2.17
LTBR-205ENST00000535739 EMILIN1Q9Y6C2 1016 aa28.62■■■□□ 2.17
LTBR-205ENST00000535739 KIF24Q5T7B8 1368 aa28.62■■■□□ 2.17
LTBR-205ENST00000535739 PNPLA7Q6ZV29 1317 aa28.61■■■□□ 2.17
LTBR-205ENST00000535739 TFCP2L1Q9NZI6 479 aa28.6■■■□□ 2.17
LTBR-205ENST00000535739 MAP2P11137 1827 aaKnown RBP28.59■■■□□ 2.17
LTBR-205ENST00000535739 CCNL1Q9UK58 526 aaPredicted RBP28.58■■■□□ 2.17
LTBR-205ENST00000535739 CLSPNQ9HAW4 1339 aa28.58■■■□□ 2.17
LTBR-205ENST00000535739 SLC16A10Q8TF71 515 aa28.57■■■□□ 2.16
LTBR-205ENST00000535739 PPM1GO15355 546 aaPredicted RBP28.56■■■□□ 2.16
LTBR-205ENST00000535739 COL24A1Q17RW2 1714 aa28.56■■■□□ 2.16
LTBR-205ENST00000535739 PCDH11XQ9BZA7 1347 aa28.56■■■□□ 2.16
LTBR-205ENST00000535739 PCDH11YQ9BZA8 1340 aa28.56■■■□□ 2.16
LTBR-205ENST00000535739 ANKRD26Q9UPS8 1709 aa28.55■■■□□ 2.16
LTBR-205ENST00000535739 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
LTBR-205ENST00000535739 ITGB4P16144 1822 aa28.53■■■□□ 2.16
LTBR-205ENST00000535739 PKD1L3Q7Z443 1732 aa28.52■■■□□ 2.16
LTBR-205ENST00000535739 MAP3K5Q99683 1374 aa28.52■■■□□ 2.16
LTBR-205ENST00000535739 CHD4Q14839 1912 aa28.52■■■□□ 2.16
LTBR-205ENST00000535739 CYP27B1O15528 508 aa28.52■■■□□ 2.16
LTBR-205ENST00000535739 POLD1P28340 1107 aa28.51■■■□□ 2.15
LTBR-205ENST00000535739 TOGARAM1Q9Y4F4 1720 aa28.51■■■□□ 2.15
LTBR-205ENST00000535739 MPRIPQ6WCQ1 1025 aa28.5■■■□□ 2.15
LTBR-205ENST00000535739 WASHC2AQ641Q2 1341 aa28.49■■■□□ 2.15
LTBR-205ENST00000535739 C5P01031 1676 aa28.49■■■□□ 2.15
LTBR-205ENST00000535739 TAF1LQ8IZX4 1826 aa28.49■■■□□ 2.15
LTBR-205ENST00000535739 KLHL34Q8N239 644 aa28.49■■■□□ 2.15
LTBR-205ENST00000535739 NCAPD2Q15021 1401 aa28.49■■■□□ 2.15
LTBR-205ENST00000535739 GOLGB1Q14789 3259 aaKnown RBP28.49■■■□□ 2.15
LTBR-205ENST00000535739 MSH5O43196 834 aa28.46■■■□□ 2.15
LTBR-205ENST00000535739 COL23A1Q86Y22 540 aaPredicted RBP28.46■■■□□ 2.15
LTBR-205ENST00000535739 EYA1Q99502 592 aa28.46■■■□□ 2.15
LTBR-205ENST00000535739 POLKQ9UBT6 870 aa28.46■■■□□ 2.15
LTBR-205ENST00000535739 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
LTBR-205ENST00000535739 TNNT2P45379 298 aaPredicted RBP28.43■■■□□ 2.14
LTBR-205ENST00000535739 SPG7Q9UQ90 795 aa28.43■■■□□ 2.14
LTBR-205ENST00000535739 HSPA5P11021 654 aaKnown RBP28.42■■■□□ 2.14
LTBR-205ENST00000535739 EIF4G2P78344 907 aaKnown RBP eCLIP28.42■■■□□ 2.14
LTBR-205ENST00000535739 NKX1-1Q15270 411 aaPredicted RBP28.41■■■□□ 2.14
LTBR-205ENST00000535739 GPR162Q16538 588 aa28.41■■■□□ 2.14
LTBR-205ENST00000535739 ZNF784Q8NCA9 323 aaPredicted RBP28.4■■■□□ 2.14
LTBR-205ENST00000535739 PIGBQ92521 554 aa28.4■■■□□ 2.14
LTBR-205ENST00000535739 MSL1Q68DK7 614 aa28.39■■■□□ 2.14
LTBR-205ENST00000535739 NLGN2Q8NFZ4 835 aa28.39■■■□□ 2.14
LTBR-205ENST00000535739 SMARCC1Q92922 1105 aaPredicted RBP28.39■■■□□ 2.14
LTBR-205ENST00000535739 EIF4A2Q14240 407 aaKnown RBP28.38■■■□□ 2.13
LTBR-205ENST00000535739 C4BP0C0L5 1744 aa28.38■■■□□ 2.13
LTBR-205ENST00000535739 PANK3Q9H999 370 aa28.37■■■□□ 2.13
LTBR-205ENST00000535739 PELP1Q8IZL8 1130 aaKnown RBP28.36■■■□□ 2.13
LTBR-205ENST00000535739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.36■■■□□ 2.13
LTBR-205ENST00000535739 HMGB2P26583 209 aaKnown RBP28.34■■■□□ 2.13
LTBR-205ENST00000535739 CCER1Q8TC90 406 aaPredicted RBP28.34■■■□□ 2.13
LTBR-205ENST00000535739 UBR3Q6ZT12 1888 aa28.34■■■□□ 2.13
LTBR-205ENST00000535739 PHKG2P15735 406 aa28.33■■■□□ 2.13
LTBR-205ENST00000535739 IFNL2Q8IZJ0 200 aa28.33■■■□□ 2.13
LTBR-205ENST00000535739 FLAD1Q8NFF5 587 aa28.33■■■□□ 2.13
LTBR-205ENST00000535739 AMIGO3Q86WK7 504 aa28.32■■■□□ 2.12
LTBR-205ENST00000535739 AK7Q96M32 723 aa28.32■■■□□ 2.12
LTBR-205ENST00000535739 TMOD3Q9NYL9 352 aa28.32■■■□□ 2.12
LTBR-205ENST00000535739 SMIM5Q71RC9 77 aa28.3■■■□□ 2.12
LTBR-205ENST00000535739 ASAP1Q9ULH1 1129 aa28.3■■■□□ 2.12
LTBR-205ENST00000535739 LOC102724428A0A0B4J2F2 783 aa28.29■■■□□ 2.12
LTBR-205ENST00000535739 SIK1P57059 783 aa28.29■■■□□ 2.12
LTBR-205ENST00000535739 PHF14O94880 888 aa28.28■■■□□ 2.12
LTBR-205ENST00000535739 LINC00116Q8NCU8 138 aa28.28■■■□□ 2.12
LTBR-205ENST00000535739 IGSF1Q8N6C5 1336 aa28.27■■■□□ 2.12
LTBR-205ENST00000535739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.25■■■□□ 2.11
LTBR-205ENST00000535739 YBX3P16989 372 aaKnown RBP eCLIP28.24■■■□□ 2.116e-11■■□□□ 12.3
LTBR-205ENST00000535739 ITPK1Q13572 414 aa28.24■■■□□ 2.11
LTBR-205ENST00000535739 ATG3Q9NT62 314 aa28.24■■■□□ 2.11
LTBR-205ENST00000535739 ATP6V1AP38606 617 aa28.23■■■□□ 2.11
LTBR-205ENST00000535739 MORC1Q86VD1 984 aa28.23■■■□□ 2.11
LTBR-205ENST00000535739 PLEKHG2Q9H7P9 1386 aa28.23■■■□□ 2.11
LTBR-205ENST00000535739 SSFA2P28290 1259 aa28.21■■■□□ 2.11
LTBR-205ENST00000535739 CD2APQ9Y5K6 639 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms