RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
MSRB3-206ENST00000535664 COL3A1P02461 1466 aaPredicted RBP19.5■□□□□ 0.71
MSRB3-206ENST00000535664 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
MSRB3-206ENST00000535664 TATP17735 454 aaPredicted RBP19.49■□□□□ 0.71
MSRB3-206ENST00000535664 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
MSRB3-206ENST00000535664 PEAK1Q9H792 1746 aa19.48■□□□□ 0.71
MSRB3-206ENST00000535664 MAP2P11137 1827 aaKnown RBP19.47■□□□□ 0.71
MSRB3-206ENST00000535664 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
MSRB3-206ENST00000535664 TNS1Q9HBL0 1735 aaKnown RBP19.47■□□□□ 0.71
MSRB3-206ENST00000535664 MTHFSP49914 203 aa19.46■□□□□ 0.71
MSRB3-206ENST00000535664 EZH2Q15910 746 aaKnown RBP19.46■□□□□ 0.71
MSRB3-206ENST00000535664 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
MSRB3-206ENST00000535664 PLEKHG2Q9H7P9 1386 aa19.45■□□□□ 0.7
MSRB3-206ENST00000535664 DDX54Q8TDD1 881 aaKnown RBP19.45■□□□□ 0.7
MSRB3-206ENST00000535664 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
MSRB3-206ENST00000535664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.43■□□□□ 0.7
MSRB3-206ENST00000535664 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
MSRB3-206ENST00000535664 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
MSRB3-206ENST00000535664 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
MSRB3-206ENST00000535664 EYA1Q99502 592 aa19.41■□□□□ 0.7
MSRB3-206ENST00000535664 NCAPD2Q15021 1401 aa19.41■□□□□ 0.7
MSRB3-206ENST00000535664 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
MSRB3-206ENST00000535664 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
MSRB3-206ENST00000535664 USHBP1Q8N6Y0 703 aa19.4■□□□□ 0.7
MSRB3-206ENST00000535664 MEGF6O75095 1541 aa19.4■□□□□ 0.7
MSRB3-206ENST00000535664 RGPD3A6NKT7 1758 aaPredicted RBP19.39■□□□□ 0.7
MSRB3-206ENST00000535664 RGPD4Q7Z3J3 1758 aa19.39■□□□□ 0.7
MSRB3-206ENST00000535664 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
MSRB3-206ENST00000535664 ACSBG1Q96GR2 724 aa19.37■□□□□ 0.69
MSRB3-206ENST00000535664 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
MSRB3-206ENST00000535664 KCNQ2O43526 872 aa19.36■□□□□ 0.69
MSRB3-206ENST00000535664 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
MSRB3-206ENST00000535664 RGPD2P0DJD1 1756 aa19.36■□□□□ 0.69
MSRB3-206ENST00000535664 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
MSRB3-206ENST00000535664 TXNRD1Q16881 649 aa19.35■□□□□ 0.69
MSRB3-206ENST00000535664 AMOTQ4VCS5 1084 aa19.35■□□□□ 0.69
MSRB3-206ENST00000535664 PRIM1P49642 420 aaKnown RBP19.33■□□□□ 0.68
MSRB3-206ENST00000535664 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
MSRB3-206ENST00000535664 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.68
MSRB3-206ENST00000535664 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
MSRB3-206ENST00000535664 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
MSRB3-206ENST00000535664 SYTL4Q96C24 671 aaPredicted RBP19.33■□□□□ 0.68
MSRB3-206ENST00000535664 RREB1Q92766 1687 aa19.33■□□□□ 0.68
MSRB3-206ENST00000535664 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
MSRB3-206ENST00000535664 IL13P35225 146 aa19.32■□□□□ 0.68
MSRB3-206ENST00000535664 PLEKHO1Q53GL0 409 aaPredicted RBP19.32■□□□□ 0.68
MSRB3-206ENST00000535664 PTF1AQ7RTS3 328 aa19.32■□□□□ 0.68
MSRB3-206ENST00000535664 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
MSRB3-206ENST00000535664 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
MSRB3-206ENST00000535664 PROM2Q8N271 834 aa19.31■□□□□ 0.68
MSRB3-206ENST00000535664 PSDA5PKW4 1024 aaPredicted RBP19.3■□□□□ 0.68
MSRB3-206ENST00000535664 CYP27B1O15528 508 aa19.3■□□□□ 0.68
MSRB3-206ENST00000535664 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.68
MSRB3-206ENST00000535664 STK32BQ9NY57 414 aa19.3■□□□□ 0.68
MSRB3-206ENST00000535664 SMARCC1Q92922 1105 aaPredicted RBP19.28■□□□□ 0.68
MSRB3-206ENST00000535664 NUP188Q5SRE5 1749 aa19.28■□□□□ 0.68
MSRB3-206ENST00000535664 PHKG2P15735 406 aa19.27■□□□□ 0.68
MSRB3-206ENST00000535664 SULT6B1Q6IMI4 303 aa19.27■□□□□ 0.68
MSRB3-206ENST00000535664 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
MSRB3-206ENST00000535664 PKD1L3Q7Z443 1732 aa19.27■□□□□ 0.68
MSRB3-206ENST00000535664 KDRP35968 1356 aa19.27■□□□□ 0.68
MSRB3-206ENST00000535664 SHANK3Q9BYB0 1731 aa19.26■□□□□ 0.67
MSRB3-206ENST00000535664 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
MSRB3-206ENST00000535664 SLC15A2Q16348 729 aa19.25■□□□□ 0.67
MSRB3-206ENST00000535664 DCAF5Q96JK2 942 aa19.25■□□□□ 0.67
MSRB3-206ENST00000535664 BTAF1O14981 1849 aa19.24■□□□□ 0.67
MSRB3-206ENST00000535664 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
MSRB3-206ENST00000535664 MPRIPQ6WCQ1 1025 aa19.24■□□□□ 0.67
MSRB3-206ENST00000535664 KAT6BQ8WYB5 2073 aa19.24■□□□□ 0.67
MSRB3-206ENST00000535664 ERVV-2B6SEH9 535 aa19.23■□□□□ 0.67
MSRB3-206ENST00000535664 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
MSRB3-206ENST00000535664 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
MSRB3-206ENST00000535664 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
MSRB3-206ENST00000535664 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
MSRB3-206ENST00000535664 TMOD3Q9NYL9 352 aa19.22■□□□□ 0.67
MSRB3-206ENST00000535664 ZNF530Q6P9A1 599 aaPredicted RBP19.21■□□□□ 0.67
MSRB3-206ENST00000535664 RSPH6AQ9H0K4 717 aa19.21■□□□□ 0.67
MSRB3-206ENST00000535664 SPON1Q9HCB6 807 aa19.21■□□□□ 0.67
MSRB3-206ENST00000535664 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
MSRB3-206ENST00000535664 PLEKHF1Q96S99 279 aa19.2■□□□□ 0.66
MSRB3-206ENST00000535664 CCNL1Q9UK58 526 aaPredicted RBP19.2■□□□□ 0.66
MSRB3-206ENST00000535664 LRP5O75197 1615 aa19.2■□□□□ 0.66
MSRB3-206ENST00000535664 AEBP1Q8IUX7 1158 aa19.19■□□□□ 0.66
MSRB3-206ENST00000535664 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
MSRB3-206ENST00000535664 ANO8Q9HCE9 1232 aaPredicted RBP19.19■□□□□ 0.66
MSRB3-206ENST00000535664 FCHSD2O94868 740 aa19.18■□□□□ 0.66
MSRB3-206ENST00000535664 AKAP4Q5JQC9 854 aa19.18■□□□□ 0.66
MSRB3-206ENST00000535664 PIGBQ92521 554 aa19.18■□□□□ 0.66
MSRB3-206ENST00000535664 LRRC4BQ9NT99 713 aa19.18■□□□□ 0.66
MSRB3-206ENST00000535664 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
MSRB3-206ENST00000535664 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
MSRB3-206ENST00000535664 HMOX1P09601 288 aa19.16■□□□□ 0.66
MSRB3-206ENST00000535664 SLC16A10Q8TF71 515 aa19.16■□□□□ 0.66
MSRB3-206ENST00000535664 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
MSRB3-206ENST00000535664 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
MSRB3-206ENST00000535664 PRKAR2BP31323 418 aa19.15■□□□□ 0.66
MSRB3-206ENST00000535664 CABP4P57796 275 aa19.15■□□□□ 0.66
MSRB3-206ENST00000535664 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
MSRB3-206ENST00000535664 LY75O60449 1722 aa19.14■□□□□ 0.66
MSRB3-206ENST00000535664 FLAD1Q8NFF5 587 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms