RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
SFSWAP-202ENST00000535202 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-202ENST00000535202 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-202ENST00000535202 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.53
SFSWAP-202ENST00000535202 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
SFSWAP-202ENST00000535202 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
SFSWAP-202ENST00000535202 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
SFSWAP-202ENST00000535202 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
SFSWAP-202ENST00000535202 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
SFSWAP-202ENST00000535202 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-202ENST00000535202 SLC15A2Q16348 729 aa11.75□□□□□ -0.53
SFSWAP-202ENST00000535202 PANK3Q9H999 370 aa11.75□□□□□ -0.53
SFSWAP-202ENST00000535202 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-202ENST00000535202 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
SFSWAP-202ENST00000535202 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-202ENST00000535202 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 NSD2O96028 1365 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 PKD1L3Q7Z443 1732 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
SFSWAP-202ENST00000535202 LY75O60449 1722 aa11.72□□□□□ -0.53
SFSWAP-202ENST00000535202 WASHC2AQ641Q2 1341 aa11.72□□□□□ -0.53
SFSWAP-202ENST00000535202 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
SFSWAP-202ENST00000535202 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
SFSWAP-202ENST00000535202 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
SFSWAP-202ENST00000535202 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
SFSWAP-202ENST00000535202 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
SFSWAP-202ENST00000535202 TOGARAM1Q9Y4F4 1720 aa11.7□□□□□ -0.54
SFSWAP-202ENST00000535202 KCNQ4P56696 695 aa11.7□□□□□ -0.54
SFSWAP-202ENST00000535202 EYA1Q99502 592 aa11.7□□□□□ -0.54
SFSWAP-202ENST00000535202 ITGB4P16144 1822 aa11.7□□□□□ -0.54
SFSWAP-202ENST00000535202 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
SFSWAP-202ENST00000535202 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 CYP27B1O15528 508 aa11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 MORC1Q86VD1 984 aa11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 KNSTRNQ9Y448 316 aa11.69□□□□□ -0.54
SFSWAP-202ENST00000535202 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
SFSWAP-202ENST00000535202 MTFR1LQ9H019 292 aa11.68□□□□□ -0.54
SFSWAP-202ENST00000535202 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-202ENST00000535202 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
SFSWAP-202ENST00000535202 PTGER2P43116 358 aa11.67□□□□□ -0.54
SFSWAP-202ENST00000535202 MPRIPQ6WCQ1 1025 aa11.67□□□□□ -0.54
SFSWAP-202ENST00000535202 C5P01031 1676 aa11.66□□□□□ -0.54
SFSWAP-202ENST00000535202 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
SFSWAP-202ENST00000535202 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
SFSWAP-202ENST00000535202 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
SFSWAP-202ENST00000535202 TAF1LQ8IZX4 1826 aa11.65□□□□□ -0.55
SFSWAP-202ENST00000535202 IGSF1Q8N6C5 1336 aa11.64□□□□□ -0.55
SFSWAP-202ENST00000535202 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-202ENST00000535202 IFNL2Q8IZJ0 200 aa11.64□□□□□ -0.55
SFSWAP-202ENST00000535202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
SFSWAP-202ENST00000535202 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 PHKG2P15735 406 aa11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 SGIP1Q9BQI5 828 aa11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 FHDC1Q9C0D6 1143 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-202ENST00000535202 MSH5O43196 834 aa11.62□□□□□ -0.55
SFSWAP-202ENST00000535202 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
SFSWAP-202ENST00000535202 PIGBQ92521 554 aa11.62□□□□□ -0.55
SFSWAP-202ENST00000535202 ARXQ96QS3 562 aa11.62□□□□□ -0.55
SFSWAP-202ENST00000535202 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
SFSWAP-202ENST00000535202 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 COL24A1Q17RW2 1714 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 POLD1P28340 1107 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 SYT17Q9BSW7 474 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
SFSWAP-202ENST00000535202 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-202ENST00000535202 SULT6B1Q6IMI4 303 aa11.6□□□□□ -0.55
SFSWAP-202ENST00000535202 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-202ENST00000535202 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-202ENST00000535202 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-202ENST00000535202 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-202ENST00000535202 IL13P35225 146 aa11.59□□□□□ -0.55
SFSWAP-202ENST00000535202 AK7Q96M32 723 aa11.59□□□□□ -0.55
SFSWAP-202ENST00000535202 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
SFSWAP-202ENST00000535202 UBR3Q6ZT12 1888 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 MTHFSP49914 203 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 SIK1P57059 783 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-202ENST00000535202 PHF14O94880 888 aa11.57□□□□□ -0.56
SFSWAP-202ENST00000535202 YY1P25490 414 aa11.57□□□□□ -0.56
SFSWAP-202ENST00000535202 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms