RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 LTN1O94822 1766 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 SOX12O15370 315 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 FSTL1Q12841 308 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 NLRP2Q9NX02 1062 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
VAMP1-204ENST00000535180 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
VAMP1-204ENST00000535180 ERBB3P21860 1342 aa15.73■□□□□ 0.11
VAMP1-204ENST00000535180 SYTL4Q96C24 671 aaPredicted RBP15.73■□□□□ 0.11
VAMP1-204ENST00000535180 ANKRD36BQ8N2N9 1353 aa15.73■□□□□ 0.11
VAMP1-204ENST00000535180 HSPA1AP0DMV8 641 aaKnown RBP15.72■□□□□ 0.11
VAMP1-204ENST00000535180 HSPA1BP0DMV9 641 aaKnown RBP15.72■□□□□ 0.11
VAMP1-204ENST00000535180 PRIM1P49642 420 aaKnown RBP15.72■□□□□ 0.11
VAMP1-204ENST00000535180 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
VAMP1-204ENST00000535180 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
VAMP1-204ENST00000535180 NSD2O96028 1365 aa15.72■□□□□ 0.11
VAMP1-204ENST00000535180 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
VAMP1-204ENST00000535180 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
VAMP1-204ENST00000535180 KIF13BQ9NQT8 1826 aa15.71■□□□□ 0.1
VAMP1-204ENST00000535180 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-204ENST00000535180 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
VAMP1-204ENST00000535180 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
VAMP1-204ENST00000535180 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
VAMP1-204ENST00000535180 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
VAMP1-204ENST00000535180 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
VAMP1-204ENST00000535180 HMGB2P26583 209 aaKnown RBP15.67■□□□□ 0.1
VAMP1-204ENST00000535180 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
VAMP1-204ENST00000535180 TNRC6CQ9HCJ0 1690 aaKnown RBP15.67■□□□□ 0.1
VAMP1-204ENST00000535180 TOGARAM1Q9Y4F4 1720 aa15.66■□□□□ 0.1
VAMP1-204ENST00000535180 USP47Q96K76 1375 aa15.66■□□□□ 0.1
VAMP1-204ENST00000535180 BRCA1P38398 1863 aaKnown RBP15.66■□□□□ 0.1
VAMP1-204ENST00000535180 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
VAMP1-204ENST00000535180 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
VAMP1-204ENST00000535180 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
VAMP1-204ENST00000535180 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
VAMP1-204ENST00000535180 CENPJQ9HC77 1338 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-204ENST00000535180 ARFGEF1Q9Y6D6 1849 aa15.64■□□□□ 0.09
VAMP1-204ENST00000535180 SBF1O95248 1867 aa15.63■□□□□ 0.09
VAMP1-204ENST00000535180 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
VAMP1-204ENST00000535180 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
VAMP1-204ENST00000535180 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
VAMP1-204ENST00000535180 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
VAMP1-204ENST00000535180 KDM2BQ8NHM5 1336 aa15.62■□□□□ 0.09
VAMP1-204ENST00000535180 PXDNLA1KZ92 1463 aa15.61■□□□□ 0.09
VAMP1-204ENST00000535180 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
VAMP1-204ENST00000535180 BCS1LQ9Y276 419 aa15.61■□□□□ 0.09
VAMP1-204ENST00000535180 RRAGCQ9HB90 399 aa15.6■□□□□ 0.09
VAMP1-204ENST00000535180 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
VAMP1-204ENST00000535180 TGFB2P61812 414 aa15.59■□□□□ 0.09
VAMP1-204ENST00000535180 C9orf131Q5VYM1 1079 aa15.59■□□□□ 0.09
VAMP1-204ENST00000535180 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
VAMP1-204ENST00000535180 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
VAMP1-204ENST00000535180 AMIGO3Q86WK7 504 aa15.58■□□□□ 0.08
VAMP1-204ENST00000535180 ITGB4P16144 1822 aa15.57■□□□□ 0.08
VAMP1-204ENST00000535180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
VAMP1-204ENST00000535180 ZCRB1Q8TBF4 217 aaKnown RBP15.57■□□□□ 0.08
VAMP1-204ENST00000535180 AK7Q96M32 723 aa15.57■□□□□ 0.08
VAMP1-204ENST00000535180 NSD3Q9BZ95 1437 aa15.57■□□□□ 0.08
VAMP1-204ENST00000535180 A0A0G2JLW4 131 aa15.56■□□□□ 0.08
VAMP1-204ENST00000535180 FAM161AQ3B820 660 aa15.56■□□□□ 0.08
VAMP1-204ENST00000535180 EVC2Q86UK5 1308 aa15.56■□□□□ 0.08
VAMP1-204ENST00000535180 KTN1Q86UP2 1357 aaKnown RBP15.56■□□□□ 0.08
VAMP1-204ENST00000535180 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
VAMP1-204ENST00000535180 PHF14O94880 888 aa15.55■□□□□ 0.08
VAMP1-204ENST00000535180 SMIM5Q71RC9 77 aa15.55■□□□□ 0.08
VAMP1-204ENST00000535180 FCHSD2O94868 740 aa15.54■□□□□ 0.08
VAMP1-204ENST00000535180 SSFA2P28290 1259 aa15.54■□□□□ 0.08
VAMP1-204ENST00000535180 PRDM10Q9NQV6 1147 aa15.54■□□□□ 0.08
VAMP1-204ENST00000535180 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.08
VAMP1-204ENST00000535180 MMP10P09238 476 aa15.52■□□□□ 0.08
VAMP1-204ENST00000535180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
VAMP1-204ENST00000535180 IP6K1Q92551 441 aa15.52■□□□□ 0.08
VAMP1-204ENST00000535180 DPEP1P16444 411 aa15.51■□□□□ 0.07
VAMP1-204ENST00000535180 LTV1Q96GA3 475 aaPredicted RBP15.51■□□□□ 0.07
VAMP1-204ENST00000535180 MEGF6O75095 1541 aa15.51■□□□□ 0.07
VAMP1-204ENST00000535180 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
VAMP1-204ENST00000535180 FOXN1O15353 648 aa15.5■□□□□ 0.07
VAMP1-204ENST00000535180 NME9Q86XW9 330 aa15.5■□□□□ 0.07
VAMP1-204ENST00000535180 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
VAMP1-204ENST00000535180 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
VAMP1-204ENST00000535180 C4AP0C0L4 1744 aa15.48■□□□□ 0.07
VAMP1-204ENST00000535180 MPRIPQ6WCQ1 1025 aa15.48■□□□□ 0.07
VAMP1-204ENST00000535180 VEGFAP15692 232 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-204ENST00000535180 KCNA3P22001 575 aa15.47■□□□□ 0.07
VAMP1-204ENST00000535180 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
VAMP1-204ENST00000535180 CGNL1Q0VF96 1302 aa15.46■□□□□ 0.07
VAMP1-204ENST00000535180 MLLT1Q03111 559 aaPredicted RBP15.46■□□□□ 0.07
VAMP1-204ENST00000535180 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
VAMP1-204ENST00000535180 SBNO2Q9Y2G9 1366 aa15.46■□□□□ 0.07
VAMP1-204ENST00000535180 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
VAMP1-204ENST00000535180 CTCFP49711 727 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-204ENST00000535180 NLGN1Q8N2Q7 840 aa15.45■□□□□ 0.06
VAMP1-204ENST00000535180 LINC00116Q8NCU8 138 aa15.45■□□□□ 0.06
VAMP1-204ENST00000535180 CCDC87Q9NVE4 849 aa15.45■□□□□ 0.06
VAMP1-204ENST00000535180 PIM2Q9P1W9 311 aa15.45■□□□□ 0.06
VAMP1-204ENST00000535180 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
VAMP1-204ENST00000535180 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
VAMP1-204ENST00000535180 MKRN1Q9UHC7 482 aaKnown RBP15.44■□□□□ 0.06
VAMP1-204ENST00000535180 GNPATO15228 680 aa15.43■□□□□ 0.06
VAMP1-204ENST00000535180 RGS19P49795 217 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms