RNA–Protein interactions for RNA: ENST00000534623.1

PKHD1L1-204, Transcript of PKHD1 like 1, humanhuman

TSL 2

Gene PKHD1L1, Length 466 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-204ENST00000534623 ATG7O95352 703 aa10.1□□□□□ -0.79
PKHD1L1-204ENST00000534623 TIMP2P16035 220 aa10.1□□□□□ -0.79
PKHD1L1-204ENST00000534623 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
PKHD1L1-204ENST00000534623 KDF1Q8NAX2 398 aaPredicted RBP10.1□□□□□ -0.79
PKHD1L1-204ENST00000534623 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 RASA1P20936 1047 aa10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 WDR4P57081 412 aaKnown RBP10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 GTF2IP78347 998 aa10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 CBLBQ13191 982 aa10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 PTK7Q13308 1070 aa10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
PKHD1L1-204ENST00000534623 FAM196BA6NMK8 535 aa10.08□□□□□ -0.8
PKHD1L1-204ENST00000534623 STAU1O95793 577 aaKnown RBP10.08□□□□□ -0.8
PKHD1L1-204ENST00000534623 Q6ZVU0 165 aa10.08□□□□□ -0.8
PKHD1L1-204ENST00000534623 SIRT1Q96EB6 747 aa10.08□□□□□ -0.8
PKHD1L1-204ENST00000534623 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L12C9JPN9 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L21D6R901 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 GFRA3O60609 400 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 MYCP01106 439 aaPredicted RBP10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 ARXQ96QS3 562 aa10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 DNAAF2Q9NVR5 837 aaKnown RBP10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
PKHD1L1-204ENST00000534623 FAM187AA6NFU0 413 aa10.06□□□□□ -0.8
PKHD1L1-204ENST00000534623 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
PKHD1L1-204ENST00000534623 AVPP01185 164 aa10.05□□□□□ -0.8
PKHD1L1-204ENST00000534623 ELOAQ14241 798 aaKnown RBP10.05□□□□□ -0.8
PKHD1L1-204ENST00000534623 LARP1Q6PKG0 1096 aaKnown RBP10.05□□□□□ -0.8
PKHD1L1-204ENST00000534623 LARGE2Q8N3Y3 721 aa10.05□□□□□ -0.8
PKHD1L1-204ENST00000534623 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
PKHD1L1-204ENST00000534623 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 NRG2O14511 850 aaPredicted RBP10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 ATP1A2P50993 1020 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 SCNN1DP51172 638 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 SIX5Q8N196 739 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
PKHD1L1-204ENST00000534623 TMEM229AB2RXF0 380 aa10.03□□□□□ -0.8
PKHD1L1-204ENST00000534623 DPYDQ12882 1025 aa10.03□□□□□ -0.8
PKHD1L1-204ENST00000534623 CCDC102BQ68D86 513 aa10.03□□□□□ -0.8
PKHD1L1-204ENST00000534623 ANKMY2Q8IV38 441 aa10.03□□□□□ -0.8
PKHD1L1-204ENST00000534623 ADH1AP07327 375 aa10.02□□□□□ -0.81
PKHD1L1-204ENST00000534623 TPCN2Q8NHX9 752 aa10.02□□□□□ -0.81
PKHD1L1-204ENST00000534623 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
PKHD1L1-204ENST00000534623 TMEM88BA6NKF7 163 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 CAPN5O15484 640 aaPredicted RBP10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 DGAT1O75907 488 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 CYP2U1Q7Z449 544 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 HOMEZQ8IX15 550 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 ETNK1Q9HBU6 452 aa10.01□□□□□ -0.81
PKHD1L1-204ENST00000534623 SFI1A8K8P3 1242 aa10□□□□□ -0.81
PKHD1L1-204ENST00000534623 PSME1Q06323 249 aa10□□□□□ -0.81
PKHD1L1-204ENST00000534623 MEIOBQ8N635 442 aa10□□□□□ -0.81
PKHD1L1-204ENST00000534623 SERBP1Q8NC51 408 aaKnown RBP eCLIP10□□□□□ -0.81
PKHD1L1-204ENST00000534623 TRIM52Q96A61 297 aa10□□□□□ -0.81
PKHD1L1-204ENST00000534623 GNRH1P01148 92 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 PTGIRP43119 386 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 GDF10P55107 478 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 FAM200AQ8TCP9 573 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 ARHGEF10LQ9HCE6 1279 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 RAB6BQ9NRW1 208 aa9.99□□□□□ -0.81
PKHD1L1-204ENST00000534623 A0A1W2PRU2 124 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 IL2RAP01589 272 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 INHAP05111 366 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 RELBQ01201 579 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 XAGE2Q96GT9 111 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 ZNF395Q9H8N7 513 aaPredicted RBP9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 ZNF358Q9NW07 568 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 HRH3Q9Y5N1 445 aa9.98□□□□□ -0.81
PKHD1L1-204ENST00000534623 WASLO00401 505 aaPredicted RBP9.97□□□□□ -0.81
PKHD1L1-204ENST00000534623 CSB-PGBD3P0DP91 1061 aa9.97□□□□□ -0.81
PKHD1L1-204ENST00000534623 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
PKHD1L1-204ENST00000534623 SEC13P55735 322 aa9.97□□□□□ -0.81
PKHD1L1-204ENST00000534623 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
PKHD1L1-204ENST00000534623 LGR5O75473 907 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 LAPTM4AQ15012 233 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 TRIM46Q7Z4K8 759 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 TSEN2Q8NCE0 465 aaKnown RBP9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 SERTAD1Q9UHV2 236 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 NISCHQ9Y2I1 1504 aa9.95□□□□□ -0.82
PKHD1L1-204ENST00000534623 CLN3Q13286 438 aa9.94□□□□□ -0.82
PKHD1L1-204ENST00000534623 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
PKHD1L1-204ENST00000534623 CNKSR1Q969H4 720 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms