RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 POLR3GLQ9BT43 218 aa29.67■■■□□ 2.34
GSDMD-216ENST00000534602 SLC15A2Q16348 729 aa29.66■■■□□ 2.34
GSDMD-216ENST00000534602 EMILIN1Q9Y6C2 1016 aa29.65■■■□□ 2.34
GSDMD-216ENST00000534602 USHBP1Q8N6Y0 703 aa29.64■■■□□ 2.34
GSDMD-216ENST00000534602 SHANK3Q9BYB0 1731 aa29.64■■■□□ 2.34
GSDMD-216ENST00000534602 CASZ1Q86V15 1759 aa29.64■■■□□ 2.34
GSDMD-216ENST00000534602 TATP17735 454 aaPredicted RBP29.63■■■□□ 2.33
GSDMD-216ENST00000534602 WASHC2AQ641Q2 1341 aa29.63■■■□□ 2.33
GSDMD-216ENST00000534602 ANKRD26Q9UPS8 1709 aa29.62■■■□□ 2.33
GSDMD-216ENST00000534602 PRIM1P49642 420 aaKnown RBP29.6■■■□□ 2.33
GSDMD-216ENST00000534602 PPM1GO15355 546 aaPredicted RBP29.59■■■□□ 2.33
GSDMD-216ENST00000534602 SLC27A3Q5K4L6 730 aa29.59■■■□□ 2.33
GSDMD-216ENST00000534602 PAPPAQ13219 1627 aa29.59■■■□□ 2.33
GSDMD-216ENST00000534602 NCAPD2Q15021 1401 aa29.58■■■□□ 2.33
GSDMD-216ENST00000534602 PANK3Q9H999 370 aa29.58■■■□□ 2.33
GSDMD-216ENST00000534602 POLKQ9UBT6 870 aa29.58■■■□□ 2.33
GSDMD-216ENST00000534602 MAP2P11137 1827 aaKnown RBP29.57■■■□□ 2.32
GSDMD-216ENST00000534602 DOT1LQ8TEK3 1739 aa29.57■■■□□ 2.32
GSDMD-216ENST00000534602 SYTL4Q96C24 671 aaPredicted RBP29.57■■■□□ 2.32
GSDMD-216ENST00000534602 PDGFDQ9GZP0 370 aaPredicted RBP29.57■■■□□ 2.32
GSDMD-216ENST00000534602 PPP1R1BQ9UD71 204 aaPredicted RBP29.57■■■□□ 2.32
GSDMD-216ENST00000534602 PCDH11XQ9BZA7 1347 aa29.56■■■□□ 2.32
GSDMD-216ENST00000534602 PCDH11YQ9BZA8 1340 aa29.56■■■□□ 2.32
GSDMD-216ENST00000534602 LRRC4BQ9NT99 713 aa29.56■■■□□ 2.32
GSDMD-216ENST00000534602 NSD2O96028 1365 aa29.55■■■□□ 2.32
GSDMD-216ENST00000534602 ZBTB7AO95365 584 aa29.52■■■□□ 2.32
GSDMD-216ENST00000534602 EYA1Q99502 592 aa29.5■■■□□ 2.31
GSDMD-216ENST00000534602 MTFR1LQ9H019 292 aa29.5■■■□□ 2.31
GSDMD-216ENST00000534602 PTGER2P43116 358 aa29.49■■■□□ 2.31
GSDMD-216ENST00000534602 ZNF827Q17R98 1081 aa29.49■■■□□ 2.31
GSDMD-216ENST00000534602 AKT1S1Q96B36 256 aa29.49■■■□□ 2.31
GSDMD-216ENST00000534602 LY75O60449 1722 aa29.48■■■□□ 2.31
GSDMD-216ENST00000534602 PKD1L3Q7Z443 1732 aa29.48■■■□□ 2.31
GSDMD-216ENST00000534602 CYP27B1O15528 508 aa29.48■■■□□ 2.31
GSDMD-216ENST00000534602 TNNT2P45379 298 aaPredicted RBP29.48■■■□□ 2.31
GSDMD-216ENST00000534602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.48■■■□□ 2.31
GSDMD-216ENST00000534602 SPG7Q9UQ90 795 aa29.47■■■□□ 2.31
GSDMD-216ENST00000534602 ATF5Q9Y2D1 282 aaPredicted RBP29.46■■■□□ 2.31
GSDMD-216ENST00000534602 PLEKHG2Q9H7P9 1386 aa29.45■■■□□ 2.31
GSDMD-216ENST00000534602 EIF4A2Q14240 407 aaKnown RBP29.45■■■□□ 2.31
GSDMD-216ENST00000534602 NKX1-1Q15270 411 aaPredicted RBP29.44■■■□□ 2.3
GSDMD-216ENST00000534602 KNSTRNQ9Y448 316 aa29.44■■■□□ 2.3
GSDMD-216ENST00000534602 QSER1Q2KHR3 1735 aa29.43■■■□□ 2.3
GSDMD-216ENST00000534602 HMGB2P26583 209 aaKnown RBP29.43■■■□□ 2.3
GSDMD-216ENST00000534602 CCNL1Q9UK58 526 aaPredicted RBP29.43■■■□□ 2.3
GSDMD-216ENST00000534602 MORC1Q86VD1 984 aa29.42■■■□□ 2.3
GSDMD-216ENST00000534602 SGIP1Q9BQI5 828 aa29.42■■■□□ 2.3
GSDMD-216ENST00000534602 SLC16A10Q8TF71 515 aa29.41■■■□□ 2.3
GSDMD-216ENST00000534602 KIF7Q2M1P5 1343 aa29.4■■■□□ 2.3
GSDMD-216ENST00000534602 KCNQ4P56696 695 aa29.39■■■□□ 2.3
GSDMD-216ENST00000534602 MPRIPQ6WCQ1 1025 aa29.39■■■□□ 2.3
GSDMD-216ENST00000534602 TFCP2L1Q9NZI6 479 aa29.39■■■□□ 2.3
GSDMD-216ENST00000534602 IGSF1Q8N6C5 1336 aa29.38■■■□□ 2.29
GSDMD-216ENST00000534602 DCAF8L1A6NGE4 600 aa29.37■■■□□ 2.29
GSDMD-216ENST00000534602 PNPLA7Q6ZV29 1317 aa29.37■■■□□ 2.29
GSDMD-216ENST00000534602 SMARCC1Q92922 1105 aaPredicted RBP29.36■■■□□ 2.29
GSDMD-216ENST00000534602 TOGARAM1Q9Y4F4 1720 aa29.36■■■□□ 2.29
GSDMD-216ENST00000534602 AMER1Q5JTC6 1135 aaPredicted RBP29.35■■■□□ 2.29
GSDMD-216ENST00000534602 IFNL2Q8IZJ0 200 aa29.35■■■□□ 2.29
GSDMD-216ENST00000534602 PALLDQ8WX93 1383 aa29.35■■■□□ 2.29
GSDMD-216ENST00000534602 ITGB4P16144 1822 aa29.34■■■□□ 2.29
GSDMD-216ENST00000534602 PHKG2P15735 406 aa29.33■■■□□ 2.29
GSDMD-216ENST00000534602 ARXQ96QS3 562 aa29.33■■■□□ 2.29
GSDMD-216ENST00000534602 PIGBQ92521 554 aa29.32■■■□□ 2.28
GSDMD-216ENST00000534602 FHDC1Q9C0D6 1143 aaPredicted RBP29.31■■■□□ 2.28
GSDMD-216ENST00000534602 TUBGCP6Q96RT7 1819 aa29.31■■■□□ 2.28
GSDMD-216ENST00000534602 SYT17Q9BSW7 474 aa29.3■■■□□ 2.28
GSDMD-216ENST00000534602 MAP3K5Q99683 1374 aa29.29■■■□□ 2.28
GSDMD-216ENST00000534602 COL24A1Q17RW2 1714 aa29.28■■■□□ 2.28
GSDMD-216ENST00000534602 C5P01031 1676 aa29.28■■■□□ 2.28
GSDMD-216ENST00000534602 PER1O15534 1290 aaPredicted RBP29.28■■■□□ 2.28
GSDMD-216ENST00000534602 TMOD3Q9NYL9 352 aa29.28■■■□□ 2.28
GSDMD-216ENST00000534602 POLD1P28340 1107 aa29.27■■■□□ 2.28
GSDMD-216ENST00000534602 PLEKHO1Q53GL0 409 aaPredicted RBP29.27■■■□□ 2.28
GSDMD-216ENST00000534602 AMOTQ4VCS5 1084 aa29.26■■■□□ 2.27
GSDMD-216ENST00000534602 HSP90AB1P08238 724 aaKnown RBP29.25■■■□□ 2.27
GSDMD-216ENST00000534602 TAF1LQ8IZX4 1826 aa29.24■■■□□ 2.27
GSDMD-216ENST00000534602 COL23A1Q86Y22 540 aaPredicted RBP29.24■■■□□ 2.27
GSDMD-216ENST00000534602 FLAD1Q8NFF5 587 aa29.24■■■□□ 2.27
GSDMD-216ENST00000534602 IL13P35225 146 aa29.23■■■□□ 2.27
GSDMD-216ENST00000534602 ERVV-2B6SEH9 535 aa29.22■■■□□ 2.27
GSDMD-216ENST00000534602 DCAF5Q96JK2 942 aa29.22■■■□□ 2.27
GSDMD-216ENST00000534602 KDRP35968 1356 aa29.22■■■□□ 2.27
GSDMD-216ENST00000534602 LOC102724428A0A0B4J2F2 783 aa29.2■■■□□ 2.26
GSDMD-216ENST00000534602 SIK1P57059 783 aa29.2■■■□□ 2.26
GSDMD-216ENST00000534602 NPC1L1Q9UHC9 1359 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 MSH5O43196 834 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 SULT6B1Q6IMI4 303 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 AEBP1Q8IUX7 1158 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 ASAP1Q9ULH1 1129 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 C4BP0C0L5 1744 aa29.19■■■□□ 2.26
GSDMD-216ENST00000534602 MTHFSP49914 203 aa29.18■■■□□ 2.26
GSDMD-216ENST00000534602 ZNF530Q6P9A1 599 aaPredicted RBP29.18■■■□□ 2.26
GSDMD-216ENST00000534602 YY1P25490 414 aa29.17■■■□□ 2.26
GSDMD-216ENST00000534602 AK7Q96M32 723 aa29.17■■■□□ 2.26
GSDMD-216ENST00000534602 ATG3Q9NT62 314 aa29.17■■■□□ 2.26
GSDMD-216ENST00000534602 C1orf141Q5JVX7 400 aa29.14■■■□□ 2.26
GSDMD-216ENST00000534602 CC2D1BQ5T0F9 858 aaKnown RBP29.14■■■□□ 2.26
GSDMD-216ENST00000534602 KDM6AO15550 1401 aaPredicted RBP29.12■■■□□ 2.25
GSDMD-216ENST00000534602 ATP6V1AP38606 617 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms