RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
NCAM1-218ENST00000534516 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
NCAM1-218ENST00000534516 PANK3Q9H999 370 aa12.07□□□□□ -0.48
NCAM1-218ENST00000534516 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
NCAM1-218ENST00000534516 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
NCAM1-218ENST00000534516 AMPHP49418 695 aa12.06□□□□□ -0.48
NCAM1-218ENST00000534516 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
NCAM1-218ENST00000534516 DDB1Q16531 1140 aa12.06□□□□□ -0.48
NCAM1-218ENST00000534516 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
NCAM1-218ENST00000534516 MARCH10Q8NA82 808 aaPredicted RBP12.06□□□□□ -0.48
NCAM1-218ENST00000534516 FAM208AQ9UK61 1670 aaKnown RBP12.06□□□□□ -0.48
NCAM1-218ENST00000534516 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
NCAM1-218ENST00000534516 SF3B2Q13435 895 aaKnown RBP12.05□□□□□ -0.48
NCAM1-218ENST00000534516 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
NCAM1-218ENST00000534516 KIF7Q2M1P5 1343 aa12.05□□□□□ -0.48
NCAM1-218ENST00000534516 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
NCAM1-218ENST00000534516 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
NCAM1-218ENST00000534516 PROM2Q8N271 834 aa12.04□□□□□ -0.48
NCAM1-218ENST00000534516 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
NCAM1-218ENST00000534516 SRCAPQ6ZRS2 3230 aa12.03□□□□□ -0.48
NCAM1-218ENST00000534516 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
NCAM1-218ENST00000534516 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
NCAM1-218ENST00000534516 APBA3O96018 575 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 IL2RBP14784 551 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
NCAM1-218ENST00000534516 BAG6P46379 1132 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 NBPF6Q5VWK0 638 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 NBPF4Q96M43 638 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 CGNL1Q0VF96 1302 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 SHANK3Q9BYB0 1731 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 TNS2Q63HR2 1409 aa12.02□□□□□ -0.49
NCAM1-218ENST00000534516 EXOC5O00471 708 aa12.01□□□□□ -0.49
NCAM1-218ENST00000534516 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
NCAM1-218ENST00000534516 CAMKK2Q96RR4 588 aa12.01□□□□□ -0.49
NCAM1-218ENST00000534516 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
NCAM1-218ENST00000534516 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
NCAM1-218ENST00000534516 KAT6BQ8WYB5 2073 aa12.01□□□□□ -0.49
NCAM1-218ENST00000534516 MEGF6O75095 1541 aa12.01□□□□□ -0.49
NCAM1-218ENST00000534516 RREB1Q92766 1687 aa12□□□□□ -0.49
NCAM1-218ENST00000534516 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
NCAM1-218ENST00000534516 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
NCAM1-218ENST00000534516 KCNQ2O43526 872 aa11.99□□□□□ -0.49
NCAM1-218ENST00000534516 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
NCAM1-218ENST00000534516 INSRP06213 1382 aa11.99□□□□□ -0.49
NCAM1-218ENST00000534516 FLT4P35916 1363 aa11.99□□□□□ -0.49
NCAM1-218ENST00000534516 WASHC2AQ641Q2 1341 aa11.98□□□□□ -0.49
NCAM1-218ENST00000534516 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
NCAM1-218ENST00000534516 ACSBG1Q96GR2 724 aa11.98□□□□□ -0.49
NCAM1-218ENST00000534516 NHSQ6T4R5 1651 aa11.97□□□□□ -0.49
NCAM1-218ENST00000534516 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
NCAM1-218ENST00000534516 BCL9O00512 1426 aa11.96□□□□□ -0.49
NCAM1-218ENST00000534516 BTAF1O14981 1849 aa11.96□□□□□ -0.49
NCAM1-218ENST00000534516 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
NCAM1-218ENST00000534516 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
NCAM1-218ENST00000534516 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
NCAM1-218ENST00000534516 KIF24Q5T7B8 1368 aa11.95□□□□□ -0.5
NCAM1-218ENST00000534516 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
NCAM1-218ENST00000534516 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
NCAM1-218ENST00000534516 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
NCAM1-218ENST00000534516 CNGB1Q14028 1251 aaPredicted RBP11.94□□□□□ -0.5
NCAM1-218ENST00000534516 R3HDM1Q15032 1099 aaKnown RBP11.94□□□□□ -0.5
NCAM1-218ENST00000534516 MORC1Q86VD1 984 aa11.94□□□□□ -0.5
NCAM1-218ENST00000534516 ZCRB1Q8TBF4 217 aaKnown RBP11.94□□□□□ -0.5
NCAM1-218ENST00000534516 EYA1Q99502 592 aa11.94□□□□□ -0.5
NCAM1-218ENST00000534516 RGPD3A6NKT7 1758 aaPredicted RBP11.94□□□□□ -0.5
NCAM1-218ENST00000534516 RGPD4Q7Z3J3 1758 aa11.94□□□□□ -0.5
NCAM1-218ENST00000534516 NSD2O96028 1365 aa11.93□□□□□ -0.5
NCAM1-218ENST00000534516 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
NCAM1-218ENST00000534516 NCAPD2Q15021 1401 aa11.93□□□□□ -0.5
NCAM1-218ENST00000534516 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
NCAM1-218ENST00000534516 CC2D1BQ5T0F9 858 aaKnown RBP11.92□□□□□ -0.5
NCAM1-218ENST00000534516 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
NCAM1-218ENST00000534516 PLSCR1O15162 318 aa11.91□□□□□ -0.5
NCAM1-218ENST00000534516 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
NCAM1-218ENST00000534516 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
NCAM1-218ENST00000534516 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
NCAM1-218ENST00000534516 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
NCAM1-218ENST00000534516 GABBR2O75899 941 aa11.9□□□□□ -0.5
NCAM1-218ENST00000534516 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
NCAM1-218ENST00000534516 FKBP8Q14318 412 aa11.9□□□□□ -0.5
NCAM1-218ENST00000534516 ITGB4P16144 1822 aa11.89□□□□□ -0.51
NCAM1-218ENST00000534516 CYP27B1O15528 508 aa11.89□□□□□ -0.51
NCAM1-218ENST00000534516 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
NCAM1-218ENST00000534516 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
NCAM1-218ENST00000534516 KCNQ4P56696 695 aa11.88□□□□□ -0.51
NCAM1-218ENST00000534516 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
NCAM1-218ENST00000534516 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
NCAM1-218ENST00000534516 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
NCAM1-218ENST00000534516 MTHFSP49914 203 aa11.87□□□□□ -0.51
NCAM1-218ENST00000534516 LRRC4BQ9NT99 713 aa11.87□□□□□ -0.51
NCAM1-218ENST00000534516 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 LY75O60449 1722 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 IL13P35225 146 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
NCAM1-218ENST00000534516 LRP5O75197 1615 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
NCAM1-218ENST00000534516 CASZ1Q86V15 1759 aa11.85□□□□□ -0.51
NCAM1-218ENST00000534516 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms