RNA–Protein interactions for RNA: ENST00000534343.1

RRP8-205, Transcript of ribosomal RNA processing 8, humanhuman

TSL 2 BASIC

Gene RRP8, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-205ENST00000534343 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
RRP8-205ENST00000534343 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
RRP8-205ENST00000534343 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
RRP8-205ENST00000534343 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
RRP8-205ENST00000534343 YBX3P16989 372 aaKnown RBP eCLIP14.35□□□□□ -0.11
RRP8-205ENST00000534343 HOXC9P31274 260 aa14.35□□□□□ -0.11
RRP8-205ENST00000534343 ZCRB1Q8TBF4 217 aaKnown RBP14.35□□□□□ -0.11
RRP8-205ENST00000534343 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
RRP8-205ENST00000534343 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
RRP8-205ENST00000534343 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
RRP8-205ENST00000534343 KCNQ4P56696 695 aa14.33□□□□□ -0.12
RRP8-205ENST00000534343 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
RRP8-205ENST00000534343 COL23A1Q86Y22 540 aaPredicted RBP14.33□□□□□ -0.12
RRP8-205ENST00000534343 TESK2Q96S53 571 aa14.33□□□□□ -0.12
RRP8-205ENST00000534343 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
RRP8-205ENST00000534343 ADCY9O60503 1353 aa14.33□□□□□ -0.12
RRP8-205ENST00000534343 HMGB2P26583 209 aaKnown RBP14.32□□□□□ -0.12
RRP8-205ENST00000534343 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
RRP8-205ENST00000534343 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
RRP8-205ENST00000534343 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
RRP8-205ENST00000534343 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
RRP8-205ENST00000534343 COG3Q96JB2 828 aa14.31□□□□□ -0.12
RRP8-205ENST00000534343 USP47Q96K76 1375 aa14.31□□□□□ -0.12
RRP8-205ENST00000534343 C5P01031 1676 aa14.3□□□□□ -0.12
RRP8-205ENST00000534343 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
RRP8-205ENST00000534343 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
RRP8-205ENST00000534343 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
RRP8-205ENST00000534343 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 KIF24Q5T7B8 1368 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
RRP8-205ENST00000534343 AMPHP49418 695 aa14.28□□□□□ -0.12
RRP8-205ENST00000534343 NCAPD2Q15021 1401 aa14.28□□□□□ -0.12
RRP8-205ENST00000534343 INSRP06213 1382 aa14.27□□□□□ -0.12
RRP8-205ENST00000534343 FBLN1P23142 703 aa14.27□□□□□ -0.13
RRP8-205ENST00000534343 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
RRP8-205ENST00000534343 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.13
RRP8-205ENST00000534343 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
RRP8-205ENST00000534343 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
RRP8-205ENST00000534343 FYB1O15117 783 aa14.26□□□□□ -0.13
RRP8-205ENST00000534343 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
RRP8-205ENST00000534343 SMG6Q86US8 1419 aaKnown RBP14.24□□□□□ -0.13
RRP8-205ENST00000534343 C4BP0C0L5 1744 aa14.24□□□□□ -0.13
RRP8-205ENST00000534343 RAPGEF4Q8WZA2 1011 aa14.24□□□□□ -0.13
RRP8-205ENST00000534343 PKD1L3Q7Z443 1732 aa14.24□□□□□ -0.13
RRP8-205ENST00000534343 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
RRP8-205ENST00000534343 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
RRP8-205ENST00000534343 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
RRP8-205ENST00000534343 MAP2P11137 1827 aaKnown RBP14.23□□□□□ -0.13
RRP8-205ENST00000534343 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
RRP8-205ENST00000534343 CYP27B1O15528 508 aa14.23□□□□□ -0.13
RRP8-205ENST00000534343 RRS1Q15050 365 aaKnown RBP14.23□□□□□ -0.13
RRP8-205ENST00000534343 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
RRP8-205ENST00000534343 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
RRP8-205ENST00000534343 FLT4P35916 1363 aa14.22□□□□□ -0.13
RRP8-205ENST00000534343 HSPA6P17066 643 aa14.22□□□□□ -0.13
RRP8-205ENST00000534343 TATP17735 454 aaPredicted RBP14.22□□□□□ -0.13
RRP8-205ENST00000534343 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
RRP8-205ENST00000534343 SMARCC1Q92922 1105 aaPredicted RBP14.22□□□□□ -0.13
RRP8-205ENST00000534343 GPBP1L1Q9HC44 474 aaPredicted RBP14.22□□□□□ -0.13
RRP8-205ENST00000534343 ITGB4P16144 1822 aa14.21□□□□□ -0.13
RRP8-205ENST00000534343 MSH5O43196 834 aa14.21□□□□□ -0.13
RRP8-205ENST00000534343 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.13
RRP8-205ENST00000534343 USHBP1Q8N6Y0 703 aa14.21□□□□□ -0.13
RRP8-205ENST00000534343 TONSLQ96HA7 1378 aa14.21□□□□□ -0.14
RRP8-205ENST00000534343 SSFA2P28290 1259 aa14.2□□□□□ -0.14
RRP8-205ENST00000534343 PLEKHG2Q9H7P9 1386 aa14.2□□□□□ -0.14
RRP8-205ENST00000534343 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
RRP8-205ENST00000534343 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
RRP8-205ENST00000534343 IGSF1Q8N6C5 1336 aa14.18□□□□□ -0.14
RRP8-205ENST00000534343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.18□□□□□ -0.14
RRP8-205ENST00000534343 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
RRP8-205ENST00000534343 PIGBQ92521 554 aa14.18□□□□□ -0.14
RRP8-205ENST00000534343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.148e-7■■■■■ 31.3
RRP8-205ENST00000534343 KIF13BQ9NQT8 1826 aa14.18□□□□□ -0.14
RRP8-205ENST00000534343 KIF3CO14782 793 aa14.17□□□□□ -0.14
RRP8-205ENST00000534343 AK7Q96M32 723 aa14.17□□□□□ -0.14
RRP8-205ENST00000534343 KIF20BQ96Q89 1820 aa14.17□□□□□ -0.14
RRP8-205ENST00000534343 KIAA1551Q9HCM1 1747 aa14.16□□□□□ -0.14
RRP8-205ENST00000534343 ZNF831Q5JPB2 1677 aa14.16□□□□□ -0.14
RRP8-205ENST00000534343 LOC102724428A0A0B4J2F2 783 aa14.15□□□□□ -0.14
RRP8-205ENST00000534343 SIK1P57059 783 aa14.15□□□□□ -0.14
RRP8-205ENST00000534343 TMF1P82094 1093 aa14.15□□□□□ -0.14
RRP8-205ENST00000534343 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.14
RRP8-205ENST00000534343 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
RRP8-205ENST00000534343 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
RRP8-205ENST00000534343 KDRP35968 1356 aa14.13□□□□□ -0.15
RRP8-205ENST00000534343 ITPK1Q13572 414 aa14.13□□□□□ -0.15
RRP8-205ENST00000534343 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
RRP8-205ENST00000534343 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
RRP8-205ENST00000534343 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
RRP8-205ENST00000534343 PHF14O94880 888 aa14.11□□□□□ -0.15
RRP8-205ENST00000534343 TGFB2P61812 414 aa14.11□□□□□ -0.15
RRP8-205ENST00000534343 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
RRP8-205ENST00000534343 C10orf71Q711Q0 1435 aa14.11□□□□□ -0.15
RRP8-205ENST00000534343 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
RRP8-205ENST00000534343 PHKG2P15735 406 aa14.1□□□□□ -0.15
RRP8-205ENST00000534343 DNAJC5GQ8N7S2 189 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms