RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
MALAT1-202ENST00000534336 TEFQ10587 303 aa10.77□□□□□ -0.69
MALAT1-202ENST00000534336 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
MALAT1-202ENST00000534336 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
MALAT1-202ENST00000534336 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
MALAT1-202ENST00000534336 CCDC110Q8TBZ0 833 aa10.77□□□□□ -0.69
MALAT1-202ENST00000534336 CTNNBL1Q8WYA6 563 aaPredicted RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 EPSTI1Q96J88 318 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 KIF5BP33176 963 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 CCDC57Q2TAC2 916 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 RSRC1Q96IZ7 334 aaKnown RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 CEP131Q9UPN4 1083 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 ME1P48163 572 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 FERMT2Q96AC1 680 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 DIAPH1O60610 1272 aaKnown RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 PRR16Q569H4 304 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 PAFAH1B1P43034 410 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 C10orf67Q8IYJ2 551 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 TNIP1Q15025 636 aa10.76□□□□□ -0.69
MALAT1-202ENST00000534336 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
MALAT1-202ENST00000534336 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 CBX1P83916 185 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 WHAMMQ8TF30 809 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 KIF4AO95239 1232 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 ALS2CR12Q96Q35 445 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 IQCGQ9H095 443 aaKnown RBP10.75□□□□□ -0.69
MALAT1-202ENST00000534336 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 CCDC14Q49A88 953 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 FLIIQ13045 1269 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 PTPN14Q15678 1187 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 STIM2Q9P246 746 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 USO1O60763 962 aaKnown RBP10.75□□□□□ -0.69
MALAT1-202ENST00000534336 FKBP15Q5T1M5 1219 aa10.75□□□□□ -0.69
MALAT1-202ENST00000534336 LMAN1P49257 510 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 HSF2BPO75031 334 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.69
MALAT1-202ENST00000534336 TTC12Q9H892 705 aaPredicted RBP10.74□□□□□ -0.69
MALAT1-202ENST00000534336 SMARCC1Q92922 1105 aaPredicted RBP10.74□□□□□ -0.69
MALAT1-202ENST00000534336 TSG101Q99816 390 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
MALAT1-202ENST00000534336 PLVAPQ9BX97 442 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
MALAT1-202ENST00000534336 TTC14Q96N46 770 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 RAI14Q9P0K7 980 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 KRT85P78386 507 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
MALAT1-202ENST00000534336 AIMP1Q12904 312 aaKnown RBP10.73□□□□□ -0.69
MALAT1-202ENST00000534336 RSPH3Q86UC2 560 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 VCX3BQ9H321 246 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 CCDC69A6NI79 296 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 MGEA5O60502 916 aa10.73□□□□□ -0.69
MALAT1-202ENST00000534336 SH3BP5O60239 455 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 HLTFQ14527 1009 aaKnown RBP eCLIP10.72□□□□□ -0.69not detected■□□□□ 10.4
MALAT1-202ENST00000534336 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 CASQ2O14958 399 aaPredicted RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 HMGB3O15347 200 aaKnown RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 CACNA2D4Q7Z3S7 1137 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 ACTN2P35609 894 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 ATP6V1E1P36543 226 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 WDR33Q9C0J8 1336 aaKnown RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 SNX16P57768 344 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 ZBTB16Q05516 673 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 UPF3BQ9BZI7 483 aaKnown RBP10.72□□□□□ -0.69
MALAT1-202ENST00000534336 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
MALAT1-202ENST00000534336 GOLGA4Q13439 2230 aaKnown RBP10.71□□□□□ -0.69
MALAT1-202ENST00000534336 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
MALAT1-202ENST00000534336 CETN1Q12798 172 aa10.71□□□□□ -0.69
MALAT1-202ENST00000534336 ERCC6LQ2NKX8 1250 aa10.71□□□□□ -0.69
MALAT1-202ENST00000534336 RRP1P56182 461 aaKnown RBP10.71□□□□□ -0.69
MALAT1-202ENST00000534336 LUC7L2Q9Y383 392 aaKnown RBP10.71□□□□□ -0.69
MALAT1-202ENST00000534336 CDC45O75419 566 aa10.71□□□□□ -0.7
MALAT1-202ENST00000534336 ATP11AP98196 1134 aa10.71□□□□□ -0.7
MALAT1-202ENST00000534336 RFC1P35251 1148 aaPredicted RBP10.71□□□□□ -0.7
MALAT1-202ENST00000534336 WDR78Q5VTH9 848 aa10.71□□□□□ -0.7
MALAT1-202ENST00000534336 SETD5Q9C0A6 1442 aa10.71□□□□□ -0.7
MALAT1-202ENST00000534336 SFPQP23246 707 aaKnown RBP eCLIP10.71□□□□□ -0.7
MALAT1-202ENST00000534336 MTMR7Q9Y216 660 aa10.71□□□□□ -0.7
MALAT1-202ENST00000534336 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
MALAT1-202ENST00000534336 CTAGE6Q86UF2 777 aa10.7□□□□□ -0.7
MALAT1-202ENST00000534336 ZNF76P36508 570 aa10.7□□□□□ -0.7
MALAT1-202ENST00000534336 CEBPZQ03701 1054 aaKnown RBP10.7□□□□□ -0.7
MALAT1-202ENST00000534336 AEBP2Q6ZN18 517 aaPredicted RBP10.7□□□□□ -0.7
MALAT1-202ENST00000534336 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.7□□□□□ -0.7
MALAT1-202ENST00000534336 EHBP1Q8NDI1 1231 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms