RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MEGF6O75095 1541 aa19.46■□□□□ 0.71
SF3B2-215ENST00000534307 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
SF3B2-215ENST00000534307 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
SF3B2-215ENST00000534307 NBPF6Q5VWK0 638 aa19.45■□□□□ 0.7
SF3B2-215ENST00000534307 PROM2Q8N271 834 aa19.45■□□□□ 0.7
SF3B2-215ENST00000534307 NBPF4Q96M43 638 aa19.45■□□□□ 0.7
SF3B2-215ENST00000534307 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
SF3B2-215ENST00000534307 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
SF3B2-215ENST00000534307 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
SF3B2-215ENST00000534307 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
SF3B2-215ENST00000534307 BTAF1O14981 1849 aa19.42■□□□□ 0.7
SF3B2-215ENST00000534307 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
SF3B2-215ENST00000534307 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
SF3B2-215ENST00000534307 FHDC1Q9C0D6 1143 aaPredicted RBP19.41■□□□□ 0.7
SF3B2-215ENST00000534307 PANK3Q9H999 370 aa19.41■□□□□ 0.7
SF3B2-215ENST00000534307 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
SF3B2-215ENST00000534307 C1QTNF8P60827 252 aa19.4■□□□□ 0.7
SF3B2-215ENST00000534307 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
SF3B2-215ENST00000534307 SYT17Q9BSW7 474 aa19.4■□□□□ 0.7
SF3B2-215ENST00000534307 USHBP1Q8N6Y0 703 aa19.39■□□□□ 0.69
SF3B2-215ENST00000534307 SGIP1Q9BQI5 828 aa19.39■□□□□ 0.69
SF3B2-215ENST00000534307 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
SF3B2-215ENST00000534307 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
SF3B2-215ENST00000534307 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
SF3B2-215ENST00000534307 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
SF3B2-215ENST00000534307 NSD2O96028 1365 aa19.37■□□□□ 0.69
SF3B2-215ENST00000534307 KIF7Q2M1P5 1343 aa19.37■□□□□ 0.69
SF3B2-215ENST00000534307 TXNRD1Q16881 649 aa19.37■□□□□ 0.69
SF3B2-215ENST00000534307 ZCRB1Q8TBF4 217 aaKnown RBP19.37■□□□□ 0.69
SF3B2-215ENST00000534307 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
SF3B2-215ENST00000534307 QSER1Q2KHR3 1735 aa19.36■□□□□ 0.69
SF3B2-215ENST00000534307 TUBGCP6Q96RT7 1819 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 PKD1L3Q7Z443 1732 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 MTFR1LQ9H019 292 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 KAT6BQ8WYB5 2073 aa19.35■□□□□ 0.69
SF3B2-215ENST00000534307 MAP3K5Q99683 1374 aa19.34■□□□□ 0.69
SF3B2-215ENST00000534307 PPM1GO15355 546 aaPredicted RBP19.34■□□□□ 0.69
SF3B2-215ENST00000534307 RAPGEF4Q8WZA2 1011 aa19.34■□□□□ 0.69
SF3B2-215ENST00000534307 TATP17735 454 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-215ENST00000534307 TNNT2P45379 298 aaPredicted RBP19.31■□□□□ 0.68
SF3B2-215ENST00000534307 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
SF3B2-215ENST00000534307 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
SF3B2-215ENST00000534307 EYA1Q99502 592 aa19.3■□□□□ 0.68
SF3B2-215ENST00000534307 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
SF3B2-215ENST00000534307 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
SF3B2-215ENST00000534307 LY75O60449 1722 aa19.29■□□□□ 0.68
SF3B2-215ENST00000534307 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
SF3B2-215ENST00000534307 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
SF3B2-215ENST00000534307 CYP27B1O15528 508 aa19.28■□□□□ 0.68
SF3B2-215ENST00000534307 ARXQ96QS3 562 aa19.28■□□□□ 0.68
SF3B2-215ENST00000534307 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
SF3B2-215ENST00000534307 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
SF3B2-215ENST00000534307 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
SF3B2-215ENST00000534307 MORC1Q86VD1 984 aa19.26■□□□□ 0.67
SF3B2-215ENST00000534307 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
SF3B2-215ENST00000534307 PLEKHG2Q9H7P9 1386 aa19.25■□□□□ 0.67
SF3B2-215ENST00000534307 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
SF3B2-215ENST00000534307 SYTL4Q96C24 671 aaPredicted RBP19.25■□□□□ 0.67
SF3B2-215ENST00000534307 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
SF3B2-215ENST00000534307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
SF3B2-215ENST00000534307 ITGB4P16144 1822 aa19.23■□□□□ 0.67
SF3B2-215ENST00000534307 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
SF3B2-215ENST00000534307 ZNF827Q17R98 1081 aa19.23■□□□□ 0.67
SF3B2-215ENST00000534307 AKT1S1Q96B36 256 aa19.22■□□□□ 0.67
SF3B2-215ENST00000534307 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
SF3B2-215ENST00000534307 GPR162Q16538 588 aa19.2■□□□□ 0.66
SF3B2-215ENST00000534307 KCNQ4P56696 695 aa19.19■□□□□ 0.66
SF3B2-215ENST00000534307 NPC1L1Q9UHC9 1359 aa19.19■□□□□ 0.66
SF3B2-215ENST00000534307 PHKG2P15735 406 aa19.17■□□□□ 0.66
SF3B2-215ENST00000534307 KDRP35968 1356 aa19.17■□□□□ 0.66
SF3B2-215ENST00000534307 IL13P35225 146 aa19.16■□□□□ 0.66
SF3B2-215ENST00000534307 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
SF3B2-215ENST00000534307 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-215ENST00000534307 C5P01031 1676 aa19.16■□□□□ 0.66
SF3B2-215ENST00000534307 PALLDQ8WX93 1383 aa19.16■□□□□ 0.66
SF3B2-215ENST00000534307 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
SF3B2-215ENST00000534307 IFNL2Q8IZJ0 200 aa19.15■□□□□ 0.66
SF3B2-215ENST00000534307 PIGBQ92521 554 aa19.15■□□□□ 0.66
SF3B2-215ENST00000534307 TAF1LQ8IZX4 1826 aa19.15■□□□□ 0.66
SF3B2-215ENST00000534307 PNPLA7Q6ZV29 1317 aa19.14■□□□□ 0.65
SF3B2-215ENST00000534307 MTHFSP49914 203 aa19.13■□□□□ 0.65
SF3B2-215ENST00000534307 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
SF3B2-215ENST00000534307 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
SF3B2-215ENST00000534307 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
SF3B2-215ENST00000534307 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
SF3B2-215ENST00000534307 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-215ENST00000534307 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-215ENST00000534307 KDM6AO15550 1401 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-215ENST00000534307 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-215ENST00000534307 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
SF3B2-215ENST00000534307 SLC16A10Q8TF71 515 aa19.1■□□□□ 0.65
SF3B2-215ENST00000534307 C4BP0C0L5 1744 aa19.09■□□□□ 0.65
SF3B2-215ENST00000534307 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
SF3B2-215ENST00000534307 POLD1P28340 1107 aa19.09■□□□□ 0.65
SF3B2-215ENST00000534307 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
SF3B2-215ENST00000534307 TMOD3Q9NYL9 352 aa19.09■□□□□ 0.65
SF3B2-215ENST00000534307 TFCP2L1Q9NZI6 479 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms