RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 POLD1P28340 1107 aa17.43■□□□□ 0.38
SCUBE2-213ENST00000534295 GPR162Q16538 588 aa17.43■□□□□ 0.38
SCUBE2-213ENST00000534295 UTRNP46939 3433 aa17.43■□□□□ 0.38
SCUBE2-213ENST00000534295 NSD2O96028 1365 aa17.42■□□□□ 0.38
SCUBE2-213ENST00000534295 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
SCUBE2-213ENST00000534295 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
SCUBE2-213ENST00000534295 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
SCUBE2-213ENST00000534295 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCUBE2-213ENST00000534295 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
SCUBE2-213ENST00000534295 HOXC9P31274 260 aa17.4■□□□□ 0.38
SCUBE2-213ENST00000534295 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
SCUBE2-213ENST00000534295 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
SCUBE2-213ENST00000534295 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
SCUBE2-213ENST00000534295 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
SCUBE2-213ENST00000534295 TESK2Q96S53 571 aa17.39■□□□□ 0.37
SCUBE2-213ENST00000534295 KCNQ4P56696 695 aa17.38■□□□□ 0.37
SCUBE2-213ENST00000534295 FBLN1P23142 703 aa17.37■□□□□ 0.37
SCUBE2-213ENST00000534295 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
SCUBE2-213ENST00000534295 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
SCUBE2-213ENST00000534295 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
SCUBE2-213ENST00000534295 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
SCUBE2-213ENST00000534295 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
SCUBE2-213ENST00000534295 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
SCUBE2-213ENST00000534295 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
SCUBE2-213ENST00000534295 LY75O60449 1722 aa17.35■□□□□ 0.37
SCUBE2-213ENST00000534295 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
SCUBE2-213ENST00000534295 MEGF6O75095 1541 aa17.34■□□□□ 0.37
SCUBE2-213ENST00000534295 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
SCUBE2-213ENST00000534295 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
SCUBE2-213ENST00000534295 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
SCUBE2-213ENST00000534295 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 MSH5O43196 834 aa17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 TMF1P82094 1093 aa17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
SCUBE2-213ENST00000534295 FYB1O15117 783 aa17.32■□□□□ 0.36
SCUBE2-213ENST00000534295 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
SCUBE2-213ENST00000534295 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
SCUBE2-213ENST00000534295 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
SCUBE2-213ENST00000534295 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
SCUBE2-213ENST00000534295 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
SCUBE2-213ENST00000534295 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
SCUBE2-213ENST00000534295 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
SCUBE2-213ENST00000534295 FLAD1Q8NFF5 587 aa17.29■□□□□ 0.36
SCUBE2-213ENST00000534295 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
SCUBE2-213ENST00000534295 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
SCUBE2-213ENST00000534295 INSRP06213 1382 aa17.27■□□□□ 0.35
SCUBE2-213ENST00000534295 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
SCUBE2-213ENST00000534295 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
SCUBE2-213ENST00000534295 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
SCUBE2-213ENST00000534295 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
SCUBE2-213ENST00000534295 FLT4P35916 1363 aa17.25■□□□□ 0.35
SCUBE2-213ENST00000534295 CYP27B1O15528 508 aa17.24■□□□□ 0.35
SCUBE2-213ENST00000534295 MSL1Q68DK7 614 aa17.24■□□□□ 0.35
SCUBE2-213ENST00000534295 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
SCUBE2-213ENST00000534295 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 ADCY9O60503 1353 aa17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 C5P01031 1676 aa17.23■□□□□ 0.35
SCUBE2-213ENST00000534295 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
SCUBE2-213ENST00000534295 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
SCUBE2-213ENST00000534295 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
SCUBE2-213ENST00000534295 ITGB4P16144 1822 aa17.2■□□□□ 0.34
SCUBE2-213ENST00000534295 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
SCUBE2-213ENST00000534295 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
SCUBE2-213ENST00000534295 PIGBQ92521 554 aa17.19■□□□□ 0.34
SCUBE2-213ENST00000534295 AK7Q96M32 723 aa17.19■□□□□ 0.34
SCUBE2-213ENST00000534295 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
SCUBE2-213ENST00000534295 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
SCUBE2-213ENST00000534295 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
SCUBE2-213ENST00000534295 SSFA2P28290 1259 aa17.17■□□□□ 0.34
SCUBE2-213ENST00000534295 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
SCUBE2-213ENST00000534295 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-213ENST00000534295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCUBE2-213ENST00000534295 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
SCUBE2-213ENST00000534295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-213ENST00000534295 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-213ENST00000534295 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
SCUBE2-213ENST00000534295 LOC102724428A0A0B4J2F2 783 aa17.15■□□□□ 0.34
SCUBE2-213ENST00000534295 SIK1P57059 783 aa17.15■□□□□ 0.34
SCUBE2-213ENST00000534295 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
SCUBE2-213ENST00000534295 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
SCUBE2-213ENST00000534295 PHF14O94880 888 aa17.14■□□□□ 0.33
SCUBE2-213ENST00000534295 HSPA6P17066 643 aa17.14■□□□□ 0.33
SCUBE2-213ENST00000534295 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
SCUBE2-213ENST00000534295 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
SCUBE2-213ENST00000534295 LINC00116Q8NCU8 138 aa17.13■□□□□ 0.33
SCUBE2-213ENST00000534295 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
SCUBE2-213ENST00000534295 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
SCUBE2-213ENST00000534295 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
SCUBE2-213ENST00000534295 ITPK1Q13572 414 aa17.11■□□□□ 0.33
SCUBE2-213ENST00000534295 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
SCUBE2-213ENST00000534295 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
SCUBE2-213ENST00000534295 EYA1Q99502 592 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms