RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 CFHP08603 1231 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 KIAA1210Q9ULL0 1709 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 RIMS2Q9UQ26 1411 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 RALGAPBQ86X10 1494 aa8.7□□□□□ -1.02
CMTM1-220ENST00000534143 CEP170BQ9Y4F5 1589 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-220ENST00000534143 RGS20O76081 388 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 ARHGAP23Q9P227 1491 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 SLIT1O75093 1534 aa8.69□□□□□ -1.02
CMTM1-220ENST00000534143 COPS2P61201 443 aa8.68□□□□□ -1.02
CMTM1-220ENST00000534143 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-220ENST00000534143 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
CMTM1-220ENST00000534143 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
CMTM1-220ENST00000534143 C14orf93Q9H972 538 aaKnown RBP8.68□□□□□ -1.02
CMTM1-220ENST00000534143 GPRASP1Q5JY77 1395 aa8.68□□□□□ -1.02
CMTM1-220ENST00000534143 PIK3C2GO75747 1445 aa8.68□□□□□ -1.02
CMTM1-220ENST00000534143 ZMYND10O75800 440 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 LAMC1P11047 1609 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 CFAP70Q5T0N1 1121 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
CMTM1-220ENST00000534143 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CMTM1-220ENST00000534143 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
CMTM1-220ENST00000534143 LTKP29376 864 aa8.66□□□□□ -1.02
CMTM1-220ENST00000534143 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
CMTM1-220ENST00000534143 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.02
CMTM1-220ENST00000534143 ZPR1O75312 459 aa8.65□□□□□ -1.02
CMTM1-220ENST00000534143 BLOC1S3Q6QNY0 202 aa8.65□□□□□ -1.02
CMTM1-220ENST00000534143 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.02
CMTM1-220ENST00000534143 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
CMTM1-220ENST00000534143 POLR1AO95602 1720 aaPredicted RBP8.65□□□□□ -1.03
CMTM1-220ENST00000534143 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.03
CMTM1-220ENST00000534143 ROCK2O75116 1388 aaKnown RBP8.64□□□□□ -1.03
CMTM1-220ENST00000534143 SETD1AO15047 1707 aaKnown RBP8.64□□□□□ -1.03
CMTM1-220ENST00000534143 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
CMTM1-220ENST00000534143 CARD11Q9BXL7 1154 aa8.64□□□□□ -1.03
CMTM1-220ENST00000534143 LTBP4Q8N2S1 1624 aa8.64□□□□□ -1.03
CMTM1-220ENST00000534143 ALKQ9UM73 1620 aa8.64□□□□□ -1.03
CMTM1-220ENST00000534143 ADGRB1O14514 1584 aa8.64□□□□□ -1.03
CMTM1-220ENST00000534143 PLEKHG1Q9ULL1 1385 aa8.63□□□□□ -1.03
CMTM1-220ENST00000534143 IQGAP1P46940 1657 aa8.63□□□□□ -1.03
CMTM1-220ENST00000534143 HSPA5P11021 654 aaKnown RBP8.63□□□□□ -1.03
CMTM1-220ENST00000534143 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
CMTM1-220ENST00000534143 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
CMTM1-220ENST00000534143 EID1Q9Y6B2 187 aa8.63□□□□□ -1.03
CMTM1-220ENST00000534143 MED14O60244 1454 aa8.63□□□□□ -1.03
CMTM1-220ENST00000534143 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
CMTM1-220ENST00000534143 GCGRP47871 477 aa8.62□□□□□ -1.03
CMTM1-220ENST00000534143 MDM2Q00987 491 aaPredicted RBP8.62□□□□□ -1.03
CMTM1-220ENST00000534143 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
CMTM1-220ENST00000534143 ADAMTS13Q76LX8 1427 aa8.62□□□□□ -1.03
CMTM1-220ENST00000534143 USP47Q96K76 1375 aa8.61□□□□□ -1.03
CMTM1-220ENST00000534143 TMEM132EQ6IEE7 984 aa8.61□□□□□ -1.03
CMTM1-220ENST00000534143 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
CMTM1-220ENST00000534143 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
CMTM1-220ENST00000534143 NR1I2O75469 434 aa8.6□□□□□ -1.03
CMTM1-220ENST00000534143 CD46P15529 392 aa8.6□□□□□ -1.03
CMTM1-220ENST00000534143 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
CMTM1-220ENST00000534143 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-220ENST00000534143 TBX22Q9Y458 520 aa8.6□□□□□ -1.03
CMTM1-220ENST00000534143 ST20-MTHFSA0A0A6YYL1 179 aa8.59□□□□□ -1.03
CMTM1-220ENST00000534143 CLCN1P35523 988 aa8.59□□□□□ -1.03
CMTM1-220ENST00000534143 PUS10Q3MIT2 529 aaKnown RBP8.59□□□□□ -1.03
CMTM1-220ENST00000534143 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
CMTM1-220ENST00000534143 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
CMTM1-220ENST00000534143 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
CMTM1-220ENST00000534143 METP08581 1390 aa8.59□□□□□ -1.03
CMTM1-220ENST00000534143 DIP2AQ14689 1571 aa8.58□□□□□ -1.04
CMTM1-220ENST00000534143 YTHDC2Q9H6S0 1430 aaKnown RBP8.58□□□□□ -1.04
CMTM1-220ENST00000534143 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
CMTM1-220ENST00000534143 FUT2Q10981 343 aa8.58□□□□□ -1.04
CMTM1-220ENST00000534143 TESK2Q96S53 571 aa8.58□□□□□ -1.04
CMTM1-220ENST00000534143 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
CMTM1-220ENST00000534143 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
CMTM1-220ENST00000534143 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
CMTM1-220ENST00000534143 C11orf95C9JLR9 678 aaPredicted RBP8.57□□□□□ -1.04
CMTM1-220ENST00000534143 GGCXP38435 758 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 MORN1Q5T089 497 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 BCANQ96GW7 911 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
CMTM1-220ENST00000534143 ZNF335Q9H4Z2 1342 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-220ENST00000534143 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-220ENST00000534143 PTPRUQ92729 1446 aa8.56□□□□□ -1.04
CMTM1-220ENST00000534143 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
CMTM1-220ENST00000534143 TLL1O43897 1013 aa8.56□□□□□ -1.04
CMTM1-220ENST00000534143 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
CMTM1-220ENST00000534143 CHD2O14647 1828 aaKnown RBP8.56□□□□□ -1.04
CMTM1-220ENST00000534143 IQSEC2Q5JU85 1478 aa8.56□□□□□ -1.04
CMTM1-220ENST00000534143 TECPR2O15040 1411 aa8.55□□□□□ -1.04
CMTM1-220ENST00000534143 ADH1BP00325 375 aa8.55□□□□□ -1.04
CMTM1-220ENST00000534143 AMHR2Q16671 573 aa8.55□□□□□ -1.04
CMTM1-220ENST00000534143 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms