RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 NBPF4Q96M43 638 aa29.64■■■□□ 2.34
VPS51-214ENST00000534124 LY75O60449 1722 aa29.63■■■□□ 2.33
VPS51-214ENST00000534124 STK32BQ9NY57 414 aa29.63■■■□□ 2.33
VPS51-214ENST00000534124 HSP90AB2PQ58FF8 381 aa29.62■■■□□ 2.33
VPS51-214ENST00000534124 ZCRB1Q8TBF4 217 aaKnown RBP29.62■■■□□ 2.33
VPS51-214ENST00000534124 QSER1Q2KHR3 1735 aa29.62■■■□□ 2.33
VPS51-214ENST00000534124 PKD1L3Q7Z443 1732 aa29.62■■■□□ 2.33
VPS51-214ENST00000534124 SLC15A2Q16348 729 aa29.6■■■□□ 2.33
VPS51-214ENST00000534124 RAPGEF4Q8WZA2 1011 aa29.59■■■□□ 2.33
VPS51-214ENST00000534124 HSPA5P11021 654 aaKnown RBP29.58■■■□□ 2.33
VPS51-214ENST00000534124 NCAPD2Q15021 1401 aa29.58■■■□□ 2.33
VPS51-214ENST00000534124 EMILIN1Q9Y6C2 1016 aa29.58■■■□□ 2.33
VPS51-214ENST00000534124 USHBP1Q8N6Y0 703 aa29.57■■■□□ 2.32
VPS51-214ENST00000534124 PPP1R1BQ9UD71 204 aaPredicted RBP29.56■■■□□ 2.32
VPS51-214ENST00000534124 NSD2O96028 1365 aa29.55■■■□□ 2.32
VPS51-214ENST00000534124 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
VPS51-214ENST00000534124 TATP17735 454 aaPredicted RBP29.54■■■□□ 2.32
VPS51-214ENST00000534124 PDGFDQ9GZP0 370 aaPredicted RBP29.54■■■□□ 2.32
VPS51-214ENST00000534124 PCDH11XQ9BZA7 1347 aa29.53■■■□□ 2.32
VPS51-214ENST00000534124 PCDH11YQ9BZA8 1340 aa29.53■■■□□ 2.32
VPS51-214ENST00000534124 SLC27A3Q5K4L6 730 aa29.53■■■□□ 2.32
VPS51-214ENST00000534124 SYTL4Q96C24 671 aaPredicted RBP29.53■■■□□ 2.32
VPS51-214ENST00000534124 TUBGCP6Q96RT7 1819 aa29.52■■■□□ 2.32
VPS51-214ENST00000534124 WASHC2AQ641Q2 1341 aa29.51■■■□□ 2.32
VPS51-214ENST00000534124 PRIM1P49642 420 aaKnown RBP29.51■■■□□ 2.31
VPS51-214ENST00000534124 TOGARAM1Q9Y4F4 1720 aa29.51■■■□□ 2.31
VPS51-214ENST00000534124 ITGB4P16144 1822 aa29.5■■■□□ 2.31
VPS51-214ENST00000534124 PPM1GO15355 546 aaPredicted RBP29.49■■■□□ 2.31
VPS51-214ENST00000534124 ZBTB7AO95365 584 aa29.49■■■□□ 2.31
VPS51-214ENST00000534124 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
VPS51-214ENST00000534124 ZNF827Q17R98 1081 aa29.46■■■□□ 2.31
VPS51-214ENST00000534124 MTFR1LQ9H019 292 aa29.46■■■□□ 2.31
VPS51-214ENST00000534124 PTGER2P43116 358 aa29.45■■■□□ 2.31
VPS51-214ENST00000534124 POLKQ9UBT6 870 aa29.45■■■□□ 2.31
VPS51-214ENST00000534124 COL24A1Q17RW2 1714 aa29.45■■■□□ 2.3
VPS51-214ENST00000534124 C5P01031 1676 aa29.44■■■□□ 2.3
VPS51-214ENST00000534124 PANK3Q9H999 370 aa29.44■■■□□ 2.3
VPS51-214ENST00000534124 PLEKHG2Q9H7P9 1386 aa29.42■■■□□ 2.3
VPS51-214ENST00000534124 AKT1S1Q96B36 256 aa29.42■■■□□ 2.3
VPS51-214ENST00000534124 TAF1LQ8IZX4 1826 aa29.42■■■□□ 2.3
VPS51-214ENST00000534124 ATF5Q9Y2D1 282 aaPredicted RBP29.41■■■□□ 2.3
VPS51-214ENST00000534124 CYP27B1O15528 508 aa29.4■■■□□ 2.3
VPS51-214ENST00000534124 EYA1Q99502 592 aa29.39■■■□□ 2.3
VPS51-214ENST00000534124 TNNT2P45379 298 aaPredicted RBP29.38■■■□□ 2.29
VPS51-214ENST00000534124 SGIP1Q9BQI5 828 aa29.38■■■□□ 2.29
VPS51-214ENST00000534124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.37■■■□□ 2.29
VPS51-214ENST00000534124 CCNL1Q9UK58 526 aaPredicted RBP29.37■■■□□ 2.29
VPS51-214ENST00000534124 SPG7Q9UQ90 795 aa29.37■■■□□ 2.29
VPS51-214ENST00000534124 EIF4A2Q14240 407 aaKnown RBP29.35■■■□□ 2.29
VPS51-214ENST00000534124 KCNQ4P56696 695 aa29.34■■■□□ 2.29
VPS51-214ENST00000534124 SLC16A10Q8TF71 515 aa29.34■■■□□ 2.29
VPS51-214ENST00000534124 PNPLA7Q6ZV29 1317 aa29.34■■■□□ 2.29
VPS51-214ENST00000534124 NKX1-1Q15270 411 aaPredicted RBP29.33■■■□□ 2.29
VPS51-214ENST00000534124 TFCP2L1Q9NZI6 479 aa29.33■■■□□ 2.29
VPS51-214ENST00000534124 PALLDQ8WX93 1383 aa29.33■■■□□ 2.29
VPS51-214ENST00000534124 IGSF1Q8N6C5 1336 aa29.32■■■□□ 2.28
VPS51-214ENST00000534124 DCAF8L1A6NGE4 600 aa29.32■■■□□ 2.28
VPS51-214ENST00000534124 HMGB2P26583 209 aaKnown RBP29.32■■■□□ 2.28
VPS51-214ENST00000534124 KNSTRNQ9Y448 316 aa29.31■■■□□ 2.28
VPS51-214ENST00000534124 MAP3K5Q99683 1374 aa29.3■■■□□ 2.28
VPS51-214ENST00000534124 KIF7Q2M1P5 1343 aa29.3■■■□□ 2.28
VPS51-214ENST00000534124 MPRIPQ6WCQ1 1025 aa29.3■■■□□ 2.28
VPS51-214ENST00000534124 C4BP0C0L5 1744 aa29.29■■■□□ 2.28
VPS51-214ENST00000534124 MORC1Q86VD1 984 aa29.29■■■□□ 2.28
VPS51-214ENST00000534124 FHDC1Q9C0D6 1143 aaPredicted RBP29.29■■■□□ 2.28
VPS51-214ENST00000534124 SMARCC1Q92922 1105 aaPredicted RBP29.27■■■□□ 2.28
VPS51-214ENST00000534124 ARXQ96QS3 562 aa29.27■■■□□ 2.28
VPS51-214ENST00000534124 SYT17Q9BSW7 474 aa29.26■■■□□ 2.27
VPS51-214ENST00000534124 IFNL2Q8IZJ0 200 aa29.25■■■□□ 2.27
VPS51-214ENST00000534124 UBR3Q6ZT12 1888 aa29.25■■■□□ 2.27
VPS51-214ENST00000534124 PHKG2P15735 406 aa29.24■■■□□ 2.27
VPS51-214ENST00000534124 PIGBQ92521 554 aa29.23■■■□□ 2.27
VPS51-214ENST00000534124 POLD1P28340 1107 aa29.22■■■□□ 2.27
VPS51-214ENST00000534124 AMER1Q5JTC6 1135 aaPredicted RBP29.22■■■□□ 2.27
VPS51-214ENST00000534124 TMOD3Q9NYL9 352 aa29.21■■■□□ 2.27
VPS51-214ENST00000534124 ZNF831Q5JPB2 1677 aa29.21■■■□□ 2.27
VPS51-214ENST00000534124 CHD4Q14839 1912 aa29.19■■■□□ 2.26
VPS51-214ENST00000534124 KDRP35968 1356 aa29.17■■■□□ 2.26
VPS51-214ENST00000534124 YY1P25490 414 aa29.17■■■□□ 2.26
VPS51-214ENST00000534124 COL23A1Q86Y22 540 aaPredicted RBP29.17■■■□□ 2.26
VPS51-214ENST00000534124 FLAD1Q8NFF5 587 aa29.16■■■□□ 2.26
VPS51-214ENST00000534124 HSP90AB1P08238 724 aaKnown RBP29.15■■■□□ 2.26
VPS51-214ENST00000534124 PLEKHO1Q53GL0 409 aaPredicted RBP29.15■■■□□ 2.26
VPS51-214ENST00000534124 MSH5O43196 834 aa29.14■■■□□ 2.26
VPS51-214ENST00000534124 AMOTQ4VCS5 1084 aa29.14■■■□□ 2.26
VPS51-214ENST00000534124 LOC102724428A0A0B4J2F2 783 aa29.13■■■□□ 2.25
VPS51-214ENST00000534124 SIK1P57059 783 aa29.13■■■□□ 2.25
VPS51-214ENST00000534124 DCAF5Q96JK2 942 aa29.13■■■□□ 2.25
VPS51-214ENST00000534124 SCN11AQ9UI33 1791 aa29.13■■■□□ 2.25
VPS51-214ENST00000534124 UTRNP46939 3433 aa29.13■■■□□ 2.25
VPS51-214ENST00000534124 KDM6AO15550 1401 aaPredicted RBP29.12■■■□□ 2.25
VPS51-214ENST00000534124 COL5A3P25940 1745 aaPredicted RBP29.12■■■□□ 2.25
VPS51-214ENST00000534124 AEBP1Q8IUX7 1158 aa29.12■■■□□ 2.25
VPS51-214ENST00000534124 AK7Q96M32 723 aa29.12■■■□□ 2.25
VPS51-214ENST00000534124 ERVV-2B6SEH9 535 aa29.11■■■□□ 2.25
VPS51-214ENST00000534124 PER1O15534 1290 aaPredicted RBP29.11■■■□□ 2.25
VPS51-214ENST00000534124 ZNF530Q6P9A1 599 aaPredicted RBP29.11■■■□□ 2.25
VPS51-214ENST00000534124 ASAP1Q9ULH1 1129 aa29.11■■■□□ 2.25
VPS51-214ENST00000534124 VIRMAQ69YN4 1812 aaKnown RBP29.1■■■□□ 2.25
VPS51-214ENST00000534124 IL13P35225 146 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms