RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SRCAPQ6ZRS2 3230 aa26.02■■□□□ 1.76
LRRK1-210ENST00000534045 MAP2P11137 1827 aaKnown RBP26.02■■□□□ 1.76
LRRK1-210ENST00000534045 NHSQ6T4R5 1651 aa26.01■■□□□ 1.75
LRRK1-210ENST00000534045 PROM2Q8N271 834 aa26.01■■□□□ 1.75
LRRK1-210ENST00000534045 KNSTRNQ9Y448 316 aa26.01■■□□□ 1.75
LRRK1-210ENST00000534045 STK32BQ9NY57 414 aa26■■□□□ 1.75
LRRK1-210ENST00000534045 WASHC2AQ641Q2 1341 aa25.98■■□□□ 1.75
LRRK1-210ENST00000534045 POLKQ9UBT6 870 aa25.98■■□□□ 1.75
LRRK1-210ENST00000534045 LRP5O75197 1615 aa25.97■■□□□ 1.75
LRRK1-210ENST00000534045 PRIM1P49642 420 aaKnown RBP25.97■■□□□ 1.75
LRRK1-210ENST00000534045 MORC1Q86VD1 984 aa25.97■■□□□ 1.75
LRRK1-210ENST00000534045 SHANK3Q9BYB0 1731 aa25.94■■□□□ 1.74
LRRK1-210ENST00000534045 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
LRRK1-210ENST00000534045 BTAF1O14981 1849 aa25.93■■□□□ 1.74
LRRK1-210ENST00000534045 ANO8Q9HCE9 1232 aaPredicted RBP25.93■■□□□ 1.74
LRRK1-210ENST00000534045 PPP1R1BQ9UD71 204 aaPredicted RBP25.93■■□□□ 1.74
LRRK1-210ENST00000534045 MEGF6O75095 1541 aa25.93■■□□□ 1.74
LRRK1-210ENST00000534045 SLC15A2Q16348 729 aa25.92■■□□□ 1.74
LRRK1-210ENST00000534045 NSD2O96028 1365 aa25.92■■□□□ 1.74
LRRK1-210ENST00000534045 PCDH11XQ9BZA7 1347 aa25.91■■□□□ 1.74
LRRK1-210ENST00000534045 PCDH11YQ9BZA8 1340 aa25.91■■□□□ 1.74
LRRK1-210ENST00000534045 SPG7Q9UQ90 795 aa25.91■■□□□ 1.74
LRRK1-210ENST00000534045 DOT1LQ8TEK3 1739 aa25.91■■□□□ 1.74
LRRK1-210ENST00000534045 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
LRRK1-210ENST00000534045 EYA1Q99502 592 aa25.9■■□□□ 1.74
LRRK1-210ENST00000534045 SLC27A3Q5K4L6 730 aa25.88■■□□□ 1.73
LRRK1-210ENST00000534045 EIF4A2Q14240 407 aaKnown RBP25.87■■□□□ 1.73
LRRK1-210ENST00000534045 ZBTB7AO95365 584 aa25.83■■□□□ 1.73
LRRK1-210ENST00000534045 MPRIPQ6WCQ1 1025 aa25.83■■□□□ 1.73
LRRK1-210ENST00000534045 CYP27B1O15528 508 aa25.82■■□□□ 1.72
LRRK1-210ENST00000534045 LRRC4BQ9NT99 713 aa25.82■■□□□ 1.72
LRRK1-210ENST00000534045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.82■■□□□ 1.72
LRRK1-210ENST00000534045 HMGB2P26583 209 aaKnown RBP25.81■■□□□ 1.72
LRRK1-210ENST00000534045 CCNL1Q9UK58 526 aaPredicted RBP25.81■■□□□ 1.72
LRRK1-210ENST00000534045 ATF5Q9Y2D1 282 aaPredicted RBP25.81■■□□□ 1.72
LRRK1-210ENST00000534045 PKD1L3Q7Z443 1732 aa25.8■■□□□ 1.72
LRRK1-210ENST00000534045 PDGFDQ9GZP0 370 aaPredicted RBP25.8■■□□□ 1.72
LRRK1-210ENST00000534045 IFNL2Q8IZJ0 200 aa25.79■■□□□ 1.72
LRRK1-210ENST00000534045 KCNQ4P56696 695 aa25.78■■□□□ 1.72
LRRK1-210ENST00000534045 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
LRRK1-210ENST00000534045 TFCP2L1Q9NZI6 479 aa25.78■■□□□ 1.72
LRRK1-210ENST00000534045 DCAF8L1A6NGE4 600 aa25.77■■□□□ 1.72
LRRK1-210ENST00000534045 CNGB1Q14028 1251 aaPredicted RBP25.77■■□□□ 1.72
LRRK1-210ENST00000534045 CC2D1BQ5T0F9 858 aaKnown RBP25.77■■□□□ 1.72
LRRK1-210ENST00000534045 MTFR1LQ9H019 292 aa25.77■■□□□ 1.72
LRRK1-210ENST00000534045 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
LRRK1-210ENST00000534045 SMARCC1Q92922 1105 aaPredicted RBP25.76■■□□□ 1.71
LRRK1-210ENST00000534045 CASZ1Q86V15 1759 aa25.75■■□□□ 1.71
LRRK1-210ENST00000534045 NKX1-1Q15270 411 aaPredicted RBP25.75■■□□□ 1.71
LRRK1-210ENST00000534045 ZNF827Q17R98 1081 aa25.75■■□□□ 1.71
LRRK1-210ENST00000534045 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
LRRK1-210ENST00000534045 NCAPD2Q15021 1401 aa25.73■■□□□ 1.71
LRRK1-210ENST00000534045 PER1O15534 1290 aaPredicted RBP25.73■■□□□ 1.71
LRRK1-210ENST00000534045 PHKG2P15735 406 aa25.73■■□□□ 1.71
LRRK1-210ENST00000534045 AKT1S1Q96B36 256 aa25.73■■□□□ 1.71
LRRK1-210ENST00000534045 TMOD3Q9NYL9 352 aa25.73■■□□□ 1.71
LRRK1-210ENST00000534045 LY75O60449 1722 aa25.73■■□□□ 1.71
LRRK1-210ENST00000534045 MTHFSP49914 203 aa25.72■■□□□ 1.71
LRRK1-210ENST00000534045 AMOTQ4VCS5 1084 aa25.72■■□□□ 1.71
LRRK1-210ENST00000534045 ITGB4P16144 1822 aa25.72■■□□□ 1.71
LRRK1-210ENST00000534045 PAPPAQ13219 1627 aa25.71■■□□□ 1.71
LRRK1-210ENST00000534045 MSH5O43196 834 aa25.71■■□□□ 1.71
LRRK1-210ENST00000534045 HSP90AB1P08238 724 aaKnown RBP25.71■■□□□ 1.71
LRRK1-210ENST00000534045 SULT6B1Q6IMI4 303 aa25.7■■□□□ 1.7
LRRK1-210ENST00000534045 PIGBQ92521 554 aa25.7■■□□□ 1.7
LRRK1-210ENST00000534045 SLC16A10Q8TF71 515 aa25.69■■□□□ 1.7
LRRK1-210ENST00000534045 PALLDQ8WX93 1383 aa25.69■■□□□ 1.7
LRRK1-210ENST00000534045 TOGARAM1Q9Y4F4 1720 aa25.68■■□□□ 1.7
LRRK1-210ENST00000534045 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
LRRK1-210ENST00000534045 IL13P35225 146 aa25.67■■□□□ 1.7
LRRK1-210ENST00000534045 ZNF530Q6P9A1 599 aaPredicted RBP25.67■■□□□ 1.7
LRRK1-210ENST00000534045 POLD1P28340 1107 aa25.66■■□□□ 1.7
LRRK1-210ENST00000534045 PTGER2P43116 358 aa25.66■■□□□ 1.7
LRRK1-210ENST00000534045 PLEKHG2Q9H7P9 1386 aa25.66■■□□□ 1.7
LRRK1-210ENST00000534045 QSER1Q2KHR3 1735 aa25.66■■□□□ 1.7
LRRK1-210ENST00000534045 AEBP1Q8IUX7 1158 aa25.65■■□□□ 1.7
LRRK1-210ENST00000534045 DCAF5Q96JK2 942 aa25.65■■□□□ 1.7
LRRK1-210ENST00000534045 ARXQ96QS3 562 aa25.64■■□□□ 1.7
LRRK1-210ENST00000534045 PNPLA7Q6ZV29 1317 aa25.63■■□□□ 1.69
LRRK1-210ENST00000534045 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
LRRK1-210ENST00000534045 ERVV-2B6SEH9 535 aa25.63■■□□□ 1.69
LRRK1-210ENST00000534045 DIAPH1O60610 1272 aaKnown RBP25.63■■□□□ 1.69
LRRK1-210ENST00000534045 CABP4P57796 275 aa25.62■■□□□ 1.69
LRRK1-210ENST00000534045 FLAD1Q8NFF5 587 aa25.61■■□□□ 1.69
LRRK1-210ENST00000534045 AK7Q96M32 723 aa25.61■■□□□ 1.69
LRRK1-210ENST00000534045 C5P01031 1676 aa25.61■■□□□ 1.69
LRRK1-210ENST00000534045 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
LRRK1-210ENST00000534045 SIK1P57059 783 aa25.6■■□□□ 1.69
LRRK1-210ENST00000534045 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
LRRK1-210ENST00000534045 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
LRRK1-210ENST00000534045 HMOX1P09601 288 aa25.59■■□□□ 1.69
LRRK1-210ENST00000534045 FHDC1Q9C0D6 1143 aaPredicted RBP25.59■■□□□ 1.69
LRRK1-210ENST00000534045 TAF1LQ8IZX4 1826 aa25.58■■□□□ 1.69
LRRK1-210ENST00000534045 ATP6V1AP38606 617 aa25.58■■□□□ 1.69
LRRK1-210ENST00000534045 COL23A1Q86Y22 540 aaPredicted RBP25.58■■□□□ 1.69
LRRK1-210ENST00000534045 KLHL34Q8N239 644 aa25.58■■□□□ 1.69
LRRK1-210ENST00000534045 SGIP1Q9BQI5 828 aa25.57■■□□□ 1.68
LRRK1-210ENST00000534045 SYT17Q9BSW7 474 aa25.57■■□□□ 1.68
LRRK1-210ENST00000534045 ATG3Q9NT62 314 aa25.57■■□□□ 1.68
LRRK1-210ENST00000534045 CFAP53Q96M91 514 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms